Atta colombica: 108692544
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Entry
108692544 CDS
T11098
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
acoc Atta colombica
Pathway
acoc03030
DNA replication
acoc03410
Base excision repair
acoc03420
Nucleotide excision repair
acoc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108692544
03410 Base excision repair
108692544
03420 Nucleotide excision repair
108692544
03430 Mismatch repair
108692544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acoc03032
]
108692544
03036 Chromosome and associated proteins [BR:
acoc03036
]
108692544
03400 DNA repair and recombination proteins [BR:
acoc03400
]
108692544
DNA replication proteins [BR:
acoc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108692544
DNA Replication Termination Factors
ELG1-RFC complex
108692544
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108692544
DNA repair and recombination proteins [BR:
acoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108692544
Check point factors
HRAD17(Rad24)-RFC complex
108692544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_11
AAA
Rep_fac_C
AAA_22
AAA_16
RuvB_N
Motif
Other DBs
NCBI-GeneID:
108692544
NCBI-ProteinID:
XP_018056340
UniProt:
A0A195BVT5
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MSLWVDKYRPTTLAKLDYHLEQAENLKNMVNKRDFPHLLVHGPPGAGKKTRILCILKELY
GVAAERLKIENLQFETPSKKKIEILTISSNYHTEINPSDAGIYDRVVVMELIKATAQTHH
IDIGQREFKVVLLSNVDQLTRDAQHALRRTMEKYISTCRLILCANSTSRVLPAIQSRCVR
IRVPAPTVPEIKNILHSICKREGLTLPDELANRMVEASNRNLRRAILMLEACKVEQYPFT
VDQKVTEPDWQVYIRNTASMMVSEQSPKVLLEIRNRFYDLLTRSIPCDLIFRGLLKECIK
NCDDQLKKEIIEVASEYQHKMIRGSKPIFHLEAFAARFMTIYKKYIELSLDSFI
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggttgataaatatcgtccaacgacacttgcgaaattagattatcatctc
gaacaagcggagaatttgaaaaatatggtaaataaacgagactttccacatttattagta
catggacctcctggtgcaggaaagaaaactcgaatattatgtattttaaaggaactttat
ggcgttgcagctgaaagattgaaaatagaaaacctgcagtttgagactccgtctaaaaaa
aaaatagaaatattgacaataagtagtaattatcacacagaaataaatccgagtgatgca
ggaatatatgatagagttgttgtcatggaattaataaaagcaactgctcaaacgcatcat
atagatataggccagagagagtttaaagtggtactattgtcaaatgtggatcaacttaca
agagatgcacagcacgcacttcgcagaacaatggagaaatacattagtacgtgcagattg
atactttgtgcgaattcaacgtcgcgagttttgcctgcgattcaatcacgatgcgtgcga
attagagtccctgcaccaactgtccccgaaataaaaaatattttacactcaatttgtaaa
cgtgaaggacttactctacctgatgagttagccaatcggatggttgaagctagcaataga
aatcttcgacgagcaatattaatgctcgaggcttgcaaagtcgaacaatatccatttact
gttgatcaaaaggtaacagaaccagattggcaagtatacatacgaaatacagctagtatg
atggtctctgaacaatctcccaaagtacttctagagatacgcaacagattttacgatctg
ttaacgcgctccataccatgcgatctgatttttagagggttattgaaagaatgcataaaa
aattgtgatgatcagttaaaaaaagaaattattgaagtcgcatcggagtatcaacataaa
atgatacgtggttcgaaacctatatttcacttggaagcttttgctgcgcgatttatgacg
atttacaaaaaatacattgaattatccttggatagttttatataa
DBGET
integrated database retrieval system