Atta colombica: 108692600
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Entry
108692600 CDS
T11098
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
acoc Atta colombica
Pathway
acoc03030
DNA replication
acoc03420
Nucleotide excision repair
acoc03430
Mismatch repair
acoc03440
Homologous recombination
acoc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108692600
03420 Nucleotide excision repair
108692600
03430 Mismatch repair
108692600
03440 Homologous recombination
108692600
03460 Fanconi anemia pathway
108692600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoc03000
]
108692600
03032 DNA replication proteins [BR:
acoc03032
]
108692600
03400 DNA repair and recombination proteins [BR:
acoc03400
]
108692600
Transcription factors [BR:
acoc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108692600
DNA replication proteins [BR:
acoc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
108692600
DNA repair and recombination proteins [BR:
acoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
108692600
MMR (mismatch excision repair)
108692600
DSBR (double strand breaks repair)
HR (homologous recombination)
108692600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
zf-AN1
Motif
Other DBs
NCBI-GeneID:
108692600
NCBI-ProteinID:
XP_018056412
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MYNLTEGALEKIMRGVDIDNPILQILGYKKLPRNVNKDGSATDRFRLLISDGQKLNSFTM
LATQLNNLITENILNDYAICKITNYHMSSVNNSGKEKRVMLILGIEVLVPGNQVGNKIGN
PTNIEMKSEPESTSTSTSTCTSKATTAHYQNGSTRNATSNCQASDIYTTPIAALSPYQNK
WVIKVRVTNKSPIKTWSNSRGEGKLFSMDLIDESGEIRCTAFRDQCEKFYDMIETGNVYY
ISRCTLKAANKQFCTLKNDYEMTMTGDTEIIPCHENSDNIPTLQFDFCPISQIESKEKND
LLDILGVVTTFNDVQQIIQRTTGRELLKRDINIVDDSGTMICVTLWGKQAEDFDGSNNPI
IAIKGARVGEFNGGKNLSLLHSSVFEKDPDLPEAHRLRGWYTAVGHSENIKSLSKAGGGG
DFNAPLYTFEEATEARLGEKMNLADSFTVVATINMIRVENAIYKACPVESCKKKLIDQST
GVFRCEKCNRDYPNSIYRLLASMNIVDATGNRWITAFSEDAEKILGMSAQELGELKENDN
DAFLQKFGEASFKKFIFTLRAKSEVFQDEMRIKHVCSSVASVNYKTYLAHLIDRVSKLVH
IEKLDSN
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatttaacagaaggagcattggagaaaatcatgcgaggcgtagatatcgataat
ccaattctccaaatattgggttacaagaaattgccgagaaatgttaataaagatggttct
gctactgatcgattcagattgctgatatccgatggacagaaattaaactcattcacaatg
ttggctactcaactgaacaatctgatcacagagaacattttgaatgattatgcgatctgt
aaaataaccaactatcacatgagttcagtgaacaacagcggcaaagaaaaacgtgttatg
ttgatactgggtattgaagtattggttcctggcaatcaagttggaaacaaaataggtaat
ccgactaatatagaaatgaaatcagaacctgaatctacgtctacatctacatctacatgt
acatctaaggctacaactgcacattatcaaaatggttcaaccagaaatgctacttcaaat
tgtcaagcttctgacatatacactacgccgatcgcagcattaagcccttatcaaaacaaa
tgggtgatcaaggttcgtgtgaccaataaatctccgatcaaaacatggagcaactcgcgc
ggagaaggtaagctcttctccatggatctaattgatgaaagtggcgaaattcgatgcact
gcatttagagatcaatgtgaaaagttctatgacatgatagagactggaaatgtatattat
atctcacggtgcacactgaaggcagcgaacaaacaattttgcacgttgaaaaatgattat
gagatgactatgactggcgatacggagattataccttgccacgaaaacagcgataatatt
ccaacattacagtttgacttctgtcccataagtcaaatagaaagcaaagagaaaaatgac
ttattagatatcttgggtgtcgttacaactttcaacgatgtacaacaaattatacagcga
actactggccgagaacttttaaagagagacattaatatcgtcgatgacagtggtacgatg
atatgcgttacattatggggtaagcaggccgaagactttgacggttcgaataatccgatc
atagccattaagggagcgcgcgtgggtgaatttaatggtggaaagaacttgtctctttta
cattcctctgtatttgaaaaggatcctgatcttcctgaagcacacagattgcgcggatgg
tacactgcagttggccattcggagaacataaaatcattgtctaaagcaggcggaggtggt
gatttcaacgcgccattgtacacttttgaagaggcaactgaagctcgattgggagagaaa
atgaatcttgcagattcgtttacggtggtggcgactattaatatgatccgcgtggaaaat
gcaatctataaggcatgtccggtagaaagttgtaagaaaaagttgatcgatcaatctact
ggagtctttagatgcgagaaatgtaacagggactacccaaattccatttatcgcttactg
gcaagtatgaatatagtggatgcaacaggcaatcgctggataactgcctttagtgaagat
gctgagaagatattgggaatgtcggcacaagagttgggagaattgaaggagaatgataat
gatgcctttttgcagaaattcggcgaggcgagcttcaagaaattcatattcactttgagg
gcgaaatccgaagttttccaggatgaaatgagaataaaacatgtatgttcgtcagtcgca
tctgtaaattacaagacttacctggcacatctaatagatagagtctccaagttggtgcac
attgagaaattggattccaattag
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integrated database retrieval system
