Atta colombica: 108692612
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Entry
108692612 CDS
T11098
Name
(RefSeq) uncharacterized protein LOC108692612 isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
acoc Atta colombica
Pathway
acoc04137
Mitophagy - animal
acoc04140
Autophagy - animal
acoc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108692612
04137 Mitophagy - animal
108692612
04148 Efferocytosis
108692612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoc03000
]
108692612
Transcription factors [BR:
acoc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108692612
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS
PAS_11
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
108692612
NCBI-ProteinID:
XP_018056437
LinkDB
All DBs
Position
Unknown
AA seq
1500 aa
AA seq
DB search
MNARLHEVATERKREDGETREEGGNIILGDGHQQRGRCSDFPDDWIDKVSDYTGVNAHHM
ARENEIDFPSRKLLKPPLPPSSYGPAIAFNNVLPDTIVVPSPSITSHVGDNARSRACDIE
TTSCSTMRFPYAPGATCNVACSNAPATCNVAPASADCDDPETTWFRNEDHLAEPQSGVCT
ANTTSKICQLGPIDVEDLAMYFDSPTDGCKPPSLGNRAIYSKKSRYGQVVRMDQSQEHHR
DLNFRDLPSCNLTPNNLQTCDMGPSTLGYCDMGNDLRLRNSGYDGPPFCDPRLSDSRFCG
MRLSEEQPRESGRHNLGRGDPGLGNWFCNDCPELFNFCSEERWLQCPASDRCPLYDTSYA
YDVPVLPPCMYENGYNDNWHYDNAEDEQLLENYLSNEKRKERSRDAARCRRSRETDIFTE
LAAALPVAPEQAALLDKASVMRLAIAYLKVRAVVDSIPVTLTKSESSAKMDELFPKALNG
FMLVLSSDGNMVYLSENVRDYLGVSQMDMMGQSVYEYSHPCDHDELRECLSSKSADNNEK
RTCNFFLRLKCTLTSKGRKVNLKSASYKVIHCTGRLTNIRDSNSNSMEVDNEERRKEDED
VGQDTGTSLVLVGSPIPHPSNIEIPLGRHTFLSKHNLSMKFTYADEKLAEYLGWSSEELM
GRSVFEFYHALDNLALDKCFKCLFSKGQCETVAYRFLGKRGGYAWVITQATLIHCSKQQK
PISVVCVNYILSGIEHEDEVYSVRQLAARDNDANLVKIEKPLPVLVPADSSAVSTTDSSQ
VSLNDEEKIPEELNVDDESRSDDRPFAVTASIFRSIDEKNDCKDDSQKDGALPKHAQKEK
AFVFLEKALKESLEESIKENDVPATVNQQSFAKKTPFILQDKPTVVNDSSDSAGHCDRPQ
SVTRHLFAPLATAVQQQEQQQQQEQEQSQLSCRPQTATASIFAPRTEDMNKGFLTFSEDQ
PGLTMLKDEPEDLTHLAPTAGDVCVPLEDTPFLSDMLDEFIFGNDNYGCPLLSPGDTLTP
ELRSADLSGSLKDADLVDTTTRAKNAVDRLADSDPFMYGDSPGSPCGIDSSTVSPSLSKY
RQSPERSVDSLGSPTGGSGGDGLSEDEMLMLGISDSIGDEELALRAPYIPMSDQDEALEF
LINDNMVMWSSSQSDKGSSKWLLDDRERNSESSLAQLLRTDQAVSRRYNDHGGGLLNSSQ
ILGQTPRKNMLFESNRWFSNQERPNKRIHSGLNTDSENEYKRLKCEDSSFERINLEDTLV
TKQQRQSTTLHKKSPPTLGNTCGSQLLRRLVSSQMPSIVSQVATLPDSNGHIRSDNERHR
EDFSKQRDSDLDDIIDFVESEGDRGGGGGGGENHGGIGDGLDKIDATSRRRNPSCGTGGS
SVLMNLLVSGCDDPLMSSCNMSTVLSSNLTPLSINVDNQIVPHCANTDVISLPDHLSPDT
RKHLIGPFTGGGGDGNTPIVSPTTSALASFDSFDWIRDGSTGLLQVGSDLLGGLLDRNLV
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcgtttgcacgaagtggcaacagaaagaaaaagagaagatggtgagacgagg
gaggagggtggaaacatcattcttggcgacggtcatcaacagcgaggtcgttgctctgat
tttcccgacgactggatcgacaaggtatcggattatactggtgtcaatgcgcatcacatg
gcgagagaaaacgagatcgatttcccgtcgcgcaaattgctgaaaccaccgctgccaccg
tcgtcttatggtccagcgatcgcgtttaacaatgtcttacccgacactattgtcgtaccc
tctcctagtattacgtcacacgttggtgataatgctagatcacgagcttgcgatatcgag
acgacatcttgctccacgatgagatttccttatgcgcctggtgcgacttgcaacgtggca
tgcagtaatgcaccagcgacgtgcaatgtcgctccagcgagtgctgactgcgacgatccg
gagacaacgtggttccgcaacgaggatcacttggccgagccacaatcgggggtttgcacg
gcgaacacgacctcgaaaatttgtcagctgggcccaattgatgtcgaggatctcgcaatg
tacttcgattcaccgacggacggctgcaagccaccctcgttgggtaatcgagcgatctat
tcgaagaaatcgcgctacggacaggtcgtaaggatggatcagtctcaggaacatcaccgc
gatctgaatttccgtgatctaccttcttgcaatctaacacccaataatctacaaacttgc
gatatggggcccagtacactgggatattgcgatatgggcaacgatctacggcttcgtaac
tcaggatacgatggtccgccattttgcgatccaagacttagcgattcgcgattttgcggt
atgaggctgtccgaggagcagccccgtgaatcagggcgacacaatctgggacggggcgac
ccgggactgggcaattggttctgcaacgattgcccggaactgttcaatttctgcagcgag
gaacgatggctgcagtgcccggcgagcgatcgctgtcccctttatgacacctcgtacgct
tacgatgtgcctgttttaccgccatgtatgtacgagaatggttacaacgataattggcat
tacgacaatgcggaggacgaacaactcctcgagaattacttgagcaacgagaagaggaag
gaaagatctcgcgatgcagcgcgctgcagacgtagcagagaaaccgatatcttcactgaa
cttgcggctgctcttccggtcgcaccggaacaagcagcgctcttagataaggccagcgta
atgaggttggcgattgcctacctcaaagtccgagccgtcgtggattccattccagttacg
ctgacaaaatccgagtcgtccgcaaagatggatgaattatttccaaaagctctcaacggc
tttatgttagtactctccagtgacggcaacatggtctacctttcagaaaatgtcagagac
tatctcggagtgtcacaaatggatatgatgggacaaagtgtatacgaatatagtcatccc
tgtgaccatgatgaattgcgtgagtgcctgtcttcgaagtcggcggataacaatgaaaaa
cgtacctgcaactttttcttgcgactcaaatgtactctcactagcaaaggcagaaaggtc
aatctgaagagtgcttcttacaaggtgattcactgcactggcagattgacaaacatccgc
gactcaaactcgaactctatggaagttgataatgaagagcgacgcaaagaggatgaggac
gtgggacaagatacaggcacttctctagtgctcgtaggtagtcctatacctcatcctagt
aatattgagatacctttgggacgtcatacctttttgtcaaaacacaatctcagcatgaaa
tttacctacgctgacgaaaaattagctgaatatttgggctggagcagtgaggagctgatg
ggtcgatcagtctttgagttttatcatgcactcgacaatcttgcactagacaaatgtttc
aaatgcctgttcagcaagggccagtgcgagaccgtagcgtacagattccttggcaagcga
ggtggttacgcctgggttattacccaggccaccctcattcactgctccaagcagcaaaag
ccgatctctgtcgtctgtgtcaactacatcctaagtgggatcgagcacgaggatgaggta
tacagcgtgcgccagctggccgcgcgtgacaacgacgccaatttggtgaagatagagaaa
ccgttgccggtcttggtgccggccgatagtagtgctgtatcgacaacggattcgagtcag
gtatcactaaacgacgaggagaagattcccgaggaattgaacgtcgacgacgagtccagg
agcgacgatcgaccgttcgccgttaccgcgtcgatcttccgttcaatcgacgaaaagaac
gactgcaaagacgattcgcagaaggacggtgccttgccgaaacacgcccaaaaagaaaag
gcattcgttttcctcgagaaggctctcaaagagtctctggaggagtcgattaaggagaac
gacgtaccggcaacggtaaaccaacagtcctttgctaagaaaacgccctttatattacag
gataaaccgacggtggtgaacgattcatcagacagtgctggacactgtgatcgtccgcaa
tcggttacgagacatctgttcgcaccgctcgcgaccgccgtgcaacaacaggaacaacaa
caacaacaggaacaggaacagtcacaattatcctgtcgtccgcaaacggccacagcgagc
attttcgcgcctcgtactgaggatatgaataaaggctttttgactttcagcgaggatcag
ccgggtctcaccatgttgaaggacgagccggaggacttgacacatctcgcacctacggcc
ggtgatgtgtgtgtacctttggaagacactcccttcttgtcagatatgctggatgagttt
atcttcggcaatgataactatggctgtcctctattgagtccgggagacactctaacaccg
gagttacgttccgcagatctctcgggatccctcaaagatgcagacctcgtggacactact
actagagccaagaatgcggtcgatcgtttagccgatagtgatcccttcatgtacggcgac
tcccctggaagtccttgtggcatcgattcgagcactgtgtcgccgtctctctcgaagtat
cgacaaagtcctgagcgcagcgtggactcattaggtagtcctacaggaggtagcggcggc
gatggactctccgaagacgagatgcttatgttaggtatcagtgatagtataggggatgaa
gaattagcgctcagagcaccctatattccgatgtcggaccaggatgaagcgttagaattc
ctcattaatgataacatggtaatgtggagctcgtcgcaatctgacaaaggatcctcgaaa
tggttactcgatgatcgagaacgtaattccgaatccagtctggcacaattactgcgaact
gatcaagcggtatcgcggcgatacaatgatcacggcggaggtttgctaaattcgtcgcag
atattaggacaaacacctagaaaaaacatgcttttcgaatccaatcgatggttctctaat
caggaacgtcccaataaacgcatacactccggacttaatacggactccgaaaacgaatat
aagcgtcttaagtgtgaggactcgtcttttgagcgtataaatcttgaagatacattggtg
acgaagcaacagcggcagtcgacaacgcttcacaaaaagtcgccgccgactctcggtaac
acctgtggcagccagcttctgcgtcgcctcgtctcgtcacagatgccaagtatcgtgtca
caggtggcaactttgcctgacagtaacggccatattcgcagtgacaacgaacgtcatcgc
gaggacttttcgaagcagcgtgatagcgacctcgacgatatcatcgattttgttgaatcg
gaaggcgatcgcggtgggggaggaggcggaggcgaaaatcacggcggtatcggtgatggc
ctagacaagatcgacgcaacaagtcggagaaggaatccttcctgcggcactggcggcagc
agtgtgctaatgaatctcctggtttccggttgcgatgatcctttgatgagttcttgtaat
atgtcaactgtgttatcgagtaacctgactccgttatccatcaatgtggacaatcagata
gttccacactgtgcgaacacagatgtcatatctttacctgatcatctcagcccggacacc
aggaagcatttaatcgggccttttaccggcggtggcggggacggaaatactcctatagtc
tcgcccacaacgtccgcgttggcatctttcgatagctttgattggatccgcgatggatcc
acgggcctacttcaagtgggatcagatctactcggaggattgctggatcgaaatctagtg
tga
DBGET
integrated database retrieval system
