Atta colombica: 108692666
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Entry
108692666 CDS
T11098
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acoc03009
]
108692666
Enzymes [BR:
acoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108692666
Ribosome biogenesis [BR:
acoc03009
]
Eukaryotic type
90S particles
Helicases
108692666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
AAA_19
nSTAND3
ATPase
ResIII
Flavi_DEAD
HA2_N
AAA_23
AAA_16
Helicase_RecD
AAA_30
Motif
Other DBs
NCBI-GeneID:
108692666
NCBI-ProteinID:
XP_018056512
LinkDB
All DBs
Position
Unknown
AA seq
1196 aa
AA seq
DB search
MGKKGYNWKSRAVANIDVDNSTTKEIVLDIQHRAEDYDNCNALVLPSQKRKTKNIDKKVA
TTRLLSKKRRKQLEKVVERKKKKLQRAALLEDLAKVQATPAELKQYVSLTSLQNKGLKRH
FRELETPIEKLKRKADDEEESDSTKITTNSIKMSKKKRLAILNNIKQDEAKLDPNIVGFE
SSDSSDEDDSNNEEENEEHVLDNTASNVSNEKTEINEKENEKNLTKDIDKETISTKSNNK
QESKQSVEIQQQNVLKIHTPAVFIPVNRKSEIQAARLKLPVVAEEQVIVETINENPIVII
TGETGSGKTTQVPQFLYEAGYAQNKLIGITEPRRVAAMSMSKRVTEELNLSEKEVSYLIR
FEGNVTEETKIKFMTDGVLLKEVQSDFLLTKYSVIILDEAHERSVYTDILIGLLSRIVPL
RKKRGNPLKLIIMSATLSVEEFVKNTRLFKIKPPIIEVKARQFPVKIHFNRITSKDYVNE
ALQKAIKIHTRLPEGGILIFLTGQQEVHTVVRKLRKSFPLKKNKPQIKVVKDSEKNEAPE
ALDKEHSEKDDSEDNSDDDFDAEEALRRNKQRQKKQIIFPTINLDDYSISPTDDTHEDLI
NVQDDEDNWDEDEDEDEDVIDFKGLTNAQPLWVLPLYSLLSGHKQARVFEPPPEGCRLCV
VSTNVAETSLTIPNIRYVVDSGRCKTRLYDKVTGVSTYHIGYASKAAATQRAGRAGRTRP
GHCYRXTLILQFIRTKIFNXXXXXXXQSEIQRKPVDDLLLQMKAMNIDKVVNFPFPTPPD
IVQLKSAEKRLTILEALQPPSKKEEEIYCTKVTPLGRSIAAFPVSPRYGKMLALSHQHNL
SKYTICIVAALSVQEVLIETLDMEGPTKSKWLQKRRYWAGTGNSLLLGDLMVLLRAIGTA
EYAGSKGRLLPFCEENGLRHKAVIEIRKLRQQLTNEINLNIPNLNLIIDPKMPLPTDMQA
KLLRQIVLAGMADQVAKKVLPDEIKEDQDKAKWKHAYRTPQMEEPVFMHSSCSLRKTSPE
WVVYQEIYETNKMYMRGITAIEPEWLPKFVPMLCRLSEPLIDPPPRYNPKTGKIICRVSG
TFGKAGWVLPLMNIEHPLTVDGVKWFAYFFLEGQVCPKLKRFVPSLLTTPGSITKSWAKL
IPRTQVIVQTLQSQGVLSKDKLIEIWDSDKKFLLPAYQKWLPESAHAEVAQLWPPL
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaaggttataattggaagtcaagagctgtcgcaaatatcgatgttgataat
tccaccactaaagagattgtattagacattcagcatcgcgccgaggattatgacaattgc
aacgcacttgtcttgccctctcaaaagagaaaaacgaaaaacatagataagaaagtagca
actactcgattgttatcaaagaaacgtagaaaacaattagaaaaagtagttgaacgaaag
aaaaaaaagttacagagagcagcattgttggaagacttggcaaaagtgcaagcaactcct
gccgaactaaaacaatatgtgagtctaacatccttacaaaacaagggcttaaagcgtcat
tttcgagagcttgagacaccaattgaaaaattaaaacgcaaagcagatgatgaagaagaa
agtgattcgacaaaaataactacaaactctattaaaatgagcaaaaagaaaagattagct
attctaaataatataaaacaagacgaagctaaacttgatccaaacatagttggatttgaa
tctagtgatagtagtgatgaagatgacagtaacaatgaagaggaaaatgaagaacatgtt
cttgataatactgcttctaatgtatcaaatgaaaagaccgaaattaatgaaaaagaaaat
gagaagaatcttaccaaagatatagacaaagaaacaatttcaactaaatcaaacaacaaa
caggaatctaaacagtcagtggaaatacaacagcaaaatgttctcaaaattcacacacct
gctgtttttatacctgtaaacagaaaatctgagatacaagcagctagattgaaactacct
gtcgttgcggaagaacaagttatagttgaaacgataaatgagaatccaatagttataatt
actggagagactggaagtgggaaaacaacgcaagtgcctcaatttttatatgaggctgga
tacgctcaaaataaattgatcggaataactgaaccaagaagagtggcagcaatgtcgatg
agcaagcgtgtaactgaagaactgaatctttctgaaaaggaagtttcatatttgattcgt
tttgaaggaaatgttacggaagaaacgaaaatcaaattcatgaccgatggtgttttactg
aaagaagttcaaagtgatttcctgttaacaaaatattcagtaattatacttgatgaagca
cacgaacgcagtgtgtatactgatatcctgattggtttattatcgagaattgtaccgctt
cgcaagaaacgcggtaatcctttgaagttgataattatgtcagctacactgtccgtggaa
gaattcgtaaagaacaccaggctgttcaagataaaaccgccgataattgaggtcaaagca
cgacaatttcctgtaaagatacattttaatagaataacaagcaaggattatgtcaatgaa
gcattgcaaaaagcaataaagatacatactcgccttccagaaggcggtatattaatattt
ttaacgggtcagcaagaagtgcatacagttgtgcgtaaattacgcaaatcgtttccattg
aaaaagaataaaccccaaattaaagtggtgaaagattccgaaaaaaatgaagcgccagaa
gcgctggataaagaacacagcgaaaaagatgattccgaagacaattctgatgacgatttc
gacgctgaggaagctttacgccgtaataaacagagacaaaagaaacaaattatatttcca
actattaatcttgatgattattcaataagtcctactgatgacacgcatgaagatttgatc
aatgtacaggatgacgaagacaactgggacgaagatgaagatgaggatgaagatgtaatt
gatttcaaaggactaacaaacgcacaaccattatgggtcttacccctttattctctctta
tccgggcacaaacaagccagagtgtttgagccaccaccagaaggatgtcgcttgtgcgtg
gtatctactaatgttgcggaaacttcgctgacgattcctaatattagatatgttgtagat
agtggacgttgtaaaactagactgtacgataaagtgacaggtgtaagcacatatcatatt
ggctatgctagcaaagcagcggccactcagcgtgccggcagagccggtagaactcgacct
ggtcattgctataggtagacacttatcctgcaatttatacgtacgaaaatctttaatnnn
nnnnnnnnnnnnnnnnnncaatcagagattcaaaggaaaccagtggacgatttattgctg
cagatgaaggcaatgaatatagataaagtcgtaaattttccatttcccacgccaccggat
attgtgcaattaaagtctgcagaaaaacgactcacgatacttgaagcattacagccacct
tcgaagaaggaagaagagatatactgcacgaaggtgacaccacttggacgcagtatcgcc
gcgtttccggtatctccacgttacggcaagatgctggcattatctcatcagcataattta
tcgaaatacacgatatgcatagtagcggctctcagtgtccaagaagtactgatagaaaca
cttgacatggagggtccaactaagagcaaatggctccaaaaacgtcgttactgggctggg
actggcaatagtttgctgcttggcgatttaatggttttgttaagagccatcggaactgcc
gagtatgcagggtcaaagggaagattgttgcccttttgtgaggaaaacggcttgagacac
aaggctgtgattgagatcagaaaacttaggcaacagctcaccaatgagattaatttaaat
ataccaaatttaaatttaatcattgatccaaaaatgccattgccgaccgatatgcaagcg
aaattgctgcgccagatagttcttgcgggtatggcggatcaagtcgcgaaaaaggttttg
cccgatgagataaaagaagatcaagataaggccaagtggaaacacgcctacagaacacca
caaatggaggaacctgtgttcatgcattcttcatgttctttacggaaaaccagtccggaa
tgggtggtttatcaagaaatatacgaaacaaataagatgtacatgcgaggtatcacagcg
atagaacctgaatggttgccgaaattcgtgcccatgttgtgtcgcctcagtgaaccattg
attgatccaccgccaagatataatccaaaaactgggaagatcatctgtcgcgtatccggt
acattcggaaaagccggatgggtattaccattgatgaatatagagcatccattgacggtc
gacggcgttaaatggttcgcatatttcttcttggagggtcaagtgtgccctaagctgaaa
cgatttgtcccgtcattgctgacgacacccggtagcatcactaagtcatgggccaaattg
ataccacgcactcaagtaatagtacaaactctacagtcgcagggagtcttatccaaagac
aaactgatagaaatctgggattcggataagaaatttttgctgccagcctatcaaaagtgg
ctgccggaatctgcgcatgcagaagtagcgcagttatggccgcccttgtaa
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integrated database retrieval system
