Atta colombica: 108692667
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Entry
108692667 CDS
T11098
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acoc03009
]
108692667
Enzymes [BR:
acoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108692667
Ribosome biogenesis [BR:
acoc03009
]
Eukaryotic type
90S particles
Helicases
108692667
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
LIN9_C
HEM4
PH_AIR9
Motif
Other DBs
NCBI-GeneID:
108692667
NCBI-ProteinID:
XP_018056513
UniProt:
A0A195AX39
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MDAHDLFKKLAIGAKFDVKRFRKDAERFQIMKPSKNEVEINNTIEKIKDEVLEPIESKAK
RKYKDENEDVDEITLLNGLSIPKNGSVPVKKRKKVTTADKILKLEQEKINHLRNMNRISV
TGNHVPRLILEFNELKTNYQVSENLLNNMKNSGYLYPTPIQMQAMPIMLEGRQILACAPT
GSGKTAAFLLPIIHNLRGPQKKGFRAVILNPTRELAKQTYRECLKLSDGCDFRIHIISKV
NQALIKYGPSSSQKFDILITTPKRLVFLLNQDPPAISLNNVEWLIVDEADKLFEEGIRGF
REQLEEITKACVSTNLRRSMFSATNTPAVSKWCRCNMKGLITVTVGQRNAAADLVDQKLL
FVGSERGKLVEFRNIIQKGISPPVLVFVQSKERAQELFNELIYDGINVDVIHADRTMTQR
DNTVRCFREGKIWVLICTELMGRGIDFKGVNLVINYDFPPSAISYIHRIGRTGRAGHKGK
AVTFFTQQDTVNLRSIATVLRASGCDVPDYMLAMKKHSKKERRKLERTAPMREKILTVPT
YKRKQKSCVKKKSELEKEM
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcacgatcttttcaaaaagcttgcaatcggtgctaaatttgatgtaaaacgc
tttcgaaaagatgcagaaagatttcagattatgaaaccaagtaaaaatgaagtcgaaata
aacaatacaattgagaaaataaaagacgaagtattagaacctatagaaagcaaagcaaaa
agaaaatataaagatgaaaacgaagatgttgatgaaataacattactgaatggattatcg
ataccgaaaaatggaagtgttccagttaaaaaacgtaaaaaagtcacaactgctgacaag
atattaaaactggaacaagaaaagataaaccatctgaggaacatgaatcgtatttcagtc
acaggcaatcatgtacctagattaatattagaatttaatgaattaaaaactaactatcag
gtgtcagaaaatttgttaaataatatgaaaaacagtggatacttatatccaacaccaata
cagatgcaagcaatgccaattatgttagaaggtagacagatactggcttgtgccccgaca
ggatctggaaaaactgcagcatttttattaccaatcattcataatttacgaggaccacaa
aagaagggttttcgcgctgttattttaaatcctacaagggagttagccaaacagacttat
agggaatgtttgaaattgagtgacggctgtgactttagaattcatataattagtaaagtg
aatcaggctcttattaaatatgggccttcaagctcgcaaaagtttgatattttaattact
acaccaaagcgattagtatttctcttaaatcaagatcctccagccatttcattaaataat
gttgaatggttgattgtggacgaagccgataaacttttcgaggaaggaatacgtggtttt
agggagcaattagaagagattacaaaagcctgtgttagtacaaatttacgtcgcagtatg
ttcagtgcgacaaatactccagcagtgtcaaagtggtgccgttgtaatatgaagggtctt
ataacagtaacagttggacaaagaaatgcagctgcagatttggtagatcagaagcttctt
tttgttggaagcgaaagaggtaaattagtggaatttagaaacattattcaaaagggtata
tcaccaccggtcttagtatttgtacaaagcaaagagagggctcaagaactttttaatgag
cttatatacgatggaattaatgtggatgttattcacgctgacagaacaatgacacagcga
gacaatactgtgcgttgctttagagaaggaaagatttgggttttgatctgcacagaatta
atgggcagaggtatagattttaaaggcgtaaatcttgttataaattatgattttccccca
tctgccatctcttacattcacagaataggtcgtaccggtcgtgccggtcacaagggaaag
gcagtaacgtttttcactcaacaagatacggtgaatttacggagtattgcgacggttttg
cgagcctctggatgcgacgtaccggattacatgttagccatgaagaagcacagtaagaag
gaacgacgtaagctcgagcgtacggcacccatgcgtgaaaaaatattaaccgtgcctaca
tataaacgtaaacagaaatcatgcgtcaaaaagaagtcagagttggaaaaagaaatgtaa
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