KEGG   Atta colombica: 108692725
Entry
108692725         CDS       T11098                                 
Name
(RefSeq) WD repeat-containing protein 61 isoform X1
  KO
K12602  WD repeat-containing protein 61
Organism
acoc  Atta colombica
Pathway
acoc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acoc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108692725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acoc03019]
    108692725
Messenger RNA biogenesis [BR:acoc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     108692725
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_TEP1_C Ge1_WD40 Beta-prop_EIPR1 Beta-prop_Vps41 NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_ACSF4 Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_HPS5 eIF2A Tricorn_2nd Beta-prop_NWD2_C PROPPIN Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Cytochrom_D1 Beta-prop_IFT140_1st Beta-prop_WDR75_2nd RMC1_N Beta-prop_DCAF4 MIOS_WD40 Beta-prop_pof12 WD_LRWD1 Beta-prop_DCAF12 Beta-prop_EMC1_N
Other DBs
NCBI-GeneID: 108692725
NCBI-ProteinID: XP_018056606
LinkDB
Position
Unknown
AA seq 326 aa
MYALTHKTENAHEDSIWTCGWGCPKRKKEHLDNEDSRDSVQSNEDKTAEYLVTASVDDSV
KVWELKEGALKLKHKLTGYSLGVVSIAISSDGSKCASSSLDSSLKLWDLYSGDKLLNIEV
GPVDIWTLVFSPDDKFIVSGSHAGKIHLYGTDNGKQEQTLDTRGGKFTLSVAYSPDGKYI
ASGAIDGIINIFDVAYGKVLRTLEGHAMPIRSLCFSPDSQLLLTASDDGHMKLYDVKDAN
LAGTMSGHASWVLGVAFSPDGQQFASSSSDHTVKIWELAQRQCLHTFREHKDQVWSVKYN
PQRNNIIASVSEDKSINLYECPLYEK
NT seq 981 nt   +upstreamnt  +downstreamnt
atgtatgctttaactcataaaacagaaaatgcccatgaggatagtatatggacttgcgga
tggggttgtccaaaaaggaagaaagaacatctggataatgaagattcacgtgattctgta
cagtctaatgaagacaagacagcagaatatcttgtaacagcttctgtggatgattctgtg
aaagtatgggaactgaaggagggtgctttgaagttaaaacataagttaactggatattcc
ttaggagttgtatccatagctattagctcagatggatcaaaatgtgcctctagttcactt
gattcgagtctgaaattatgggacttatattctggtgataagttattgaacattgaagtt
ggtccagtagacatttggactttagtcttttctccagatgataaattcattgtatctggc
agtcacgctggtaagatacatctatatggaactgataatggtaaacaagaacagacttta
gatacaagaggtggaaaatttacattaagtgtagcctatagtcctgatggtaaatatatt
gcaagcggcgcaatagatggcattattaatatcttcgatgttgcctatggaaaagtttta
cgtaccctggaaggtcatgcgatgcctatcagatctttatgtttctcacccgactctcag
ttgcttcttacagcatctgacgatggacatatgaaactatatgatgtcaaagatgcaaat
ctagcaggaacgatgtcaggccatgcttcttgggtacttggtgtggctttctcaccagat
ggacagcaatttgcatcaagtagttccgatcatacagtcaagatctgggaattagcacaa
agacaatgtttgcatacatttcgtgaacataaggatcaagtctggtcagttaagtataat
ccacagcgaaataatataattgcgtcagtatctgaggataaatctattaatttatacgaa
tgtcctttatatgagaaataa

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