Atta colombica: 108692747
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Entry
108692747 CDS
T11098
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoc04131
]
108692747
Membrane trafficking [BR:
acoc04131
]
Protein recycling
Others
EARP complex
108692747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
Baculo_gp41
zf-RVT
DUF6572
DUF1381
DUF6614
DcpS_C
Motif
Other DBs
NCBI-GeneID:
108692747
NCBI-ProteinID:
XP_018056646
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MQSDIMEDLKIKFFGLINKQNVTKVPLMGLNPDLLNPPDLQKCEDLCSEADQSTESEPIP
DQDVLDSIEDVYFNTDGSFDSSRYELNKLPTILQPKEIEKCYKKLKQQHQVVSKKVLQLI
LQKQSACKAEFDKILLLQDQLEAVLEICKIGRADLQLAEKQFTKASLGILANYQRRQVTQ
ELLNSLNTIKTLQCTGDRLQELLNEGNYPGAISLLLECQSAAQTYKHFHCIAELNTNLQN
ILDQAERTLDNTLSKMCIEFDVAVYSSIQEAYTLLGKTQSAMDQLHMHFTAAIHNTAFTV
IHRYAGGDVKRQYKQLCQAVPRETRIACLTELCKSLWTILNSYHLIVNWHNIQEDKIECK
SDIKDLEATLSKQYVKHKLENGMVRVWHDVEMKISIYLMNTDLTNTKFEQFVQVLGIVNR
LMEIGEDLCGFKSENLQESIKKQSLSYFSHYHATRLDELKMFLENDGWELCPVKSNFMAT
QLLEFRSLKPSLNNCKTWNSLDSSTLSDSDNSTGVDLQKYLEGGLSPFTIGLDDTMDEDI
LMNDDIEQPAYFSDESDEDIPDELKHEYVDEPDHTKVKKKCKLKQSGPMVTNTTLSILRV
CGKYLQMSKLLRSIAVTVIQSMIQFFELCFYTVHLFFTSDLQINSDSLYSPKLKLSLARI
RETLIISENDTMEENGNANYDKVRQPQLSSIVNLSQPEKLYGLTERIVAVESLIFLGQQY
EGLKPYLEHLIANSPQRGFLHQFYMQTIASAADLRKPVYMAVTSQTFDVANILNLMNKVN
WEVTDVMSQHSNYIDALIQEVCTLNERLNTIGTYITLNTNICNAVWENVAHLITHTLVEG
FSNAKKCSNGGRALMQLDFTQLKSKFEKVTSLRPMPHREYVELYIKAYYLPENSFEEWIK
EHKEYSVKHLVGLISATCQNNKKTRQRLIALVEEQRPNR
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgacatcatggaggatttgaagattaaattttttggcctcattaataagcag
aatgtgaccaaagtgccacttatgggcttgaatccagatctgcttaatccacctgactta
caaaaatgtgaagacctctgttcggaggcagatcaatcaacagagagtgagcctatacct
gatcaggatgtgttagactctatcgaagatgtttatttcaatactgatggcagttttgat
tcatcacgctatgaactaaacaaactgccaacgatattgcagcctaaggaaattgagaaa
tgttataagaaacttaagcagcaacatcaagttgtttccaagaaagtgttgcagcttatt
ttgcaaaagcagagtgcttgtaaagcggaatttgacaagattttgctgttgcaagaccaa
ctggaggctgttttagaaatatgtaagattggaagggcagatctgcaattagctgagaaa
caatttaccaaagcgagtttaggcatattagctaattatcagagacgacaagtaactcaa
gaattgttaaatagtttaaataccataaagaccttgcaatgtacaggagatcgtctgcaa
gagcttctaaatgaagggaattatcctggagccatatcgcttcttttagaatgccagagt
gcggctcagacttacaagcatttccattgtattgctgaattgaacacgaatttgcaaaat
attttagatcaagcggaaaggactttagacaatactctctctaaaatgtgcattgaattc
gatgtcgcagtgtattcttccattcaggaagcatatacattgttaggaaagactcaatcc
gctatggatcaattgcatatgcatttcactgctgccattcataacacggcgtttaccgtt
atccatcgctatgcaggaggtgatgtgaaaagacaatataaacaattgtgtcaggctgtg
cctcgtgagacacgtatagcttgtctcacggaactgtgcaaatcattgtggacaatactg
aattcgtatcatttaattgtaaattggcataatatacaagaagataaaatcgagtgtaaa
tccgatattaaggatttagaagcgactttaagcaagcaatatgtcaaacacaaattggag
aacggtatggtccgagtatggcatgatgtggaaatgaaaatatcaatatatttgatgaac
acggatttgacaaatacaaaatttgaacaatttgttcaggtattgggtatagttaacaga
ttgatggaaattggggaagatctctgtggtttcaagtcggagaacttgcaggagtctatt
aaaaaacagtccctatcttacttttctcattatcacgcaactcgtttggatgaattgaaa
atgtttctggaaaatgatggttgggaattatgccctgtgaaatccaatttcatggctact
caattattggagtttcgaagtctgaaaccttcgctcaataattgtaaaacgtggaatagt
ctagatagctcaaccttaagcgatagtgataattctacgggagttgacttgcagaaatat
ctggaaggtggtttgtcaccatttacaataggattggatgatactatggatgaagatatt
ttaatgaatgatgatattgagcaacctgcgtatttttcggatgagtctgacgaggatatt
cccgatgaattaaagcatgaatatgtcgacgaaccagatcacacaaaagttaaaaagaag
tgcaaactcaaacaatctggacctatggttacaaatacgacgttaagcatactgagagtg
tgcggcaagtatctacagatgtcgaagcttttacgatcaatcgcggttactgtcatacag
agcatgatacaatttttcgagctatgcttctacacagtacacttattctttacgtcggat
ctccaaatcaatagtgactcgttgtatagtccgaaattaaaattatctttagctcgaatc
agagaaacattgattatctctgagaacgatacaatggaagaaaatggcaatgcaaattat
gataaagtaagacaaccacagctttcatccattgtgaacttgtcacagcccgagaaactt
tacggattaacggaacgtattgtagctgtcgagtctctgatatttctaggacaacaatac
gaaggtttaaaaccttatttagagcatctcattgccaacagtcctcagagaggattttta
catcaattttatatgcagacgatagcgtctgccgcagacttaagaaaaccagtctatatg
gcggtaacatcacaaacatttgatgttgcaaatattttgaatttaatgaacaaggtcaat
tgggaagtgacggacgtaatgtctcaacacagtaattatattgatgcactaatccaagaa
gtgtgcactttgaatgagagacttaacactattggaacgtacataactttaaatacgaat
atatgcaatgcagtatgggaaaatgtggctcacttgattacacatactttagtggaagga
ttttccaatgctaaaaaatgttccaatggtggtagagctttaatgcaactcgatttcacg
cagctaaagtcaaaatttgagaaagtgacgtcattaagacctatgccacatagggagtac
gttgaattgtacatcaaagcctattatcttcctgaaaatagctttgaagaatggattaag
gagcacaaggaatattcagttaaacatttagtcggtctgatttcggcgacgtgtcaaaat
aataagaaaacacggcaacgattgatagcacttgtggaagaacagcggcccaatagatag
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integrated database retrieval system
