Atta colombica: 108692783
Help
Entry
108692783 CDS
T11098
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
acoc Atta colombica
Pathway
acoc04120
Ubiquitin mediated proteolysis
acoc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108692783
04120 Ubiquitin mediated proteolysis
108692783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoc04121
]
108692783
Enzymes [BR:
acoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108692783
Ubiquitin system [BR:
acoc04121
]
Ubiquitin ligases (E3)
U-box type E3
108692783
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Mis12
Motif
Other DBs
NCBI-GeneID:
108692783
NCBI-ProteinID:
XP_018056714
LinkDB
All DBs
Position
Unknown
AA seq
1108 aa
AA seq
DB search
MSELSQEEMRRRRLARLEGFNNNNATASSSNAIAPTSPSTSELSKAFPGSISPSIQQQLQ
RAEIPMEVEESNDKQCNITEMDNSGIESMEVDESDRKDSIPRSRTTSSSIEVTTDHIHVV
ISRVLRISWKNSVEGTIFLPQTAAYTLKQKQLDFSEIINQALMEILCMFSKGEDLLNDIT
VDMSSDRQDSPNNQASPLLSPVMALPSYQLPTMPLPIGSKSSQPKSLTYLLNCYSRIAIE
ERNHPKRSSIPPLSNVLTVLKTQCVQYSSLVLQGLVGICEASVIPMCTTYLLYPILSQSL
PRGYLHELVAKTHTNSSTFNKIFTPVLQGLYLSMQQASLVGNTHRRPIEALEELIEIRCG
PGGKIRPICRLITNQVQFLPDIMTSAAGRELTKTSFLGPFLSVSVFAEEQPKVADKFFSG
NHVTDKSVNLSLQQELESTRTSLHKMFYAILTNSNCRDATLTYLAALLRHNEKRAQIQTE
EFSLAGDGFMLNLLSVLQMLSVKIKLDTVDPLYPFHPSSFVDIKNDTRLKLTSQEVAEWQ
KHLEKTHKWTESKFPTQCWFLTLHCHHIALLPALQKYQRKLRALRDLKNMLNELQATEPQ
WKDSPFAEHNRDLIKQWKQQSEQLSKFKSCADAGLIDPVFLRRCLHFYISVAEVLLSLLT
QTAPGNPLPKLPLPQEVTCKFTALPEWYVEDIAEFLVFTLQFCPGVVISGNMDNPLITWL
LVVVCTPHCIRNPYLIAKIIEVLFVINPSPQGRTEILHEKVMAHPISKTLLASYLMKFYT
DVETTGSSSEFYDKFSIRYHISLILKSMWDSPVHRASIVNESNNGKQFVKFINMLMNDTT
FLLDESLESLKRIHEVQELMSDTTAWSALSQEQQQSRTRQLAADERQAKSYLTLAKETVA
MFHYLTVDIKEPFLRPELVGRLCAMLNFNLQQLCGPKCKNLRVRTQQKYGWQPRTLLSQL
VDIYLHLDCDNFAAALASDERSFCKELFTDAVSRLHKYAIKTTTEIERFIALAERAAIIA
RDNRARDADYGDAPEEFRDPLMDTLMEDPVRLPSGIVMDKAVIIRHLLNSATDPFSRQPL
SEDMLTPMLDLKERISIWKQQKKRSTNI
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagctcagccaggaagaaatgagaagaaggcgattagcccgattagagggtttc
aacaataataatgcaactgccagttcgtctaatgctattgctccgacttccccgagtact
tcggaactatcaaaagcattcccaggatcaatatctccgtctattcaacaacaattacag
cgtgctgagataccaatggaagtagaagagagcaacgataaacaatgtaatattaccgaa
atggataattcaggaattgaaagcatggaagttgatgaatcggataggaaagattcaata
ccacgatcgcgtacgacgagctctagcatagaagttacaacagatcacatacatgttgtc
atatcacgcgtcttgcgcatatcgtggaaaaattccgttgaaggaactatattcttacca
caaacagcagcgtacacgctgaaacagaaacagctagattttagtgaaatcattaaccag
gccttaatggagattttgtgtatgttttcgaaaggggaagatcttttgaacgatatcacg
gtagatatgtcgtccgatcgacaggacagtccgaataaccaagcaagtcctttgctaagt
cctgtcatggctcttccatcttaccaattaccgactatgccattacccataggcagcaaa
tcgtcgcaacccaaaagtttaacttacttattaaactgctattcaagaatcgcaatagag
gaaagaaatcatccaaagcgatccagcatacctcctctctcgaatgtactgacagtattg
aaaacgcaatgtgttcagtactctagccttgttctacaaggattggttggcatttgtgaa
gcttcagttattcctatgtgtaccacttatcttctctacccaatactgtcgcaaagttta
cctcgaggctaccttcacgagctcgtagctaagacacacacgaattcaagcacgttcaat
aagatattcaccccggtcttgcaaggcctgtatctctcaatgcaacaagcgagcttggtt
ggcaatacacacagaagaccgatcgaggcgctagaggaactaatagaaattcgctgcggt
ccaggcggcaaaatacgtccgatatgccgtctaattacaaatcaagtgcaattcttgccc
gatattatgacgtcagctgccggcagagaacttacgaagacttcgtttttgggaccgttt
ctctcagtatcggtatttgctgaggaacaaccgaaagtggctgacaagtttttcagcgga
aatcatgtcacggacaagtcggtgaatttatccttgcaacaagagctggaaagtactaga
acttcgttacataagatgttttatgcaatacttacaaacagcaattgccgcgatgctact
ttaacatacttggccgcgttgttgcgtcacaatgagaaacgcgcgcaaatacaaaccgag
gagttttctctggccggagatggatttatgttgaatttattatcggtcttgcaaatgctc
tctgtaaaaatcaaactggacaccgtagatcctctgtatccatttcatccctccagcttt
gttgatataaagaacgacacaagactgaaacttacctcgcaggaagtcgcggaatggcaa
aagcatctggagaagacgcataagtggacggaatcgaaatttccaactcagtgctggttc
ttgacgttgcattgccatcacatcgcgttactaccggcattgcaaaagtatcaaagaaaa
ttgcgagcgttacgcgacttaaaaaatatgctcaacgaattgcaagccacggaaccccag
tggaaggatagccccttcgctgaacataatagagatttgattaaacaatggaagcagcaa
tcggaacaattaagtaaatttaaatcgtgtgcggacgcaggtctgatagaccctgtcttt
ttaagaagatgcttacatttttatatatccgtggctgaggttttgttgagtcttctgaca
cagactgccccaggtaaccctctccccaaacttccacttcctcaggaagtcacatgcaag
tttaccgcattaccggaatggtacgtggaggatatagcggaattcttggtgtttacactc
caattctgtcctggagtagtgataagtggtaatatggataatccgcttatcacgtggcta
ctggtcgtcgtgtgtacaccgcattgtatacgaaatccgtatctaattgcaaaaatcatc
gaggtcctctttgtgataaatcctagccctcagggaagaacggagattctccacgagaaa
gtcatggcgcatcctatatccaagacacttttggcgtcgtatctcatgaagttttacacc
gacgttgaaaccactggctctagttccgagttttacgataaattttcaatacgttatcac
ataagtctaattttgaaatcaatgtgggatagtccggtacatcgagcgtctattgtcaat
gaaagcaataatggcaagcaatttgtcaagtttatcaacatgttgatgaatgacactacc
tttctacttgacgagagtttggaatctctgaagcgtatacacgaggtgcaggaactcatg
tcggacactaccgcgtggagtgcactttcccaagagcaacagcaatcgaggacgaggcag
ctggcagcagacgagagacaggccaagtcttatcttacattagccaaggaaacagttgcc
atgttccactatctgacggtcgacattaaggaaccgttcctacgaccggaattagtcggg
cgattgtgtgccatgctaaatttcaatttgcaacaattgtgcggacctaagtgcaaaaat
ctgagagtgagaacacagcaaaaatacggatggcaaccaaggacgttacttagccaattg
gttgatatatatttgcatcttgactgtgataattttgcggccgctttagccagtgacgaa
cgttcgttctgtaaggaattattcacggacgctgtaagcaggctacacaaatatgcgatc
aaaactactacggaaattgagagatttatagcgctcgcggaacgtgcggcgataatcgcg
agagataatcgcgcgcgtgatgcagattacggcgacgctcctgaggaattccgagatcca
ttgatggatactcttatggaggatccagtcagactaccatctggtattgttatggacaaa
gcagttatcattagacatttactcaatagtgccacggatcctttcagtcggcagccactt
agcgaagacatgctcaccccaatgctcgacttgaaagaaaggatatctatatggaaacaa
caaaagaaaagatcgacaaatatataa
DBGET
integrated database retrieval system
