Atta colombica: 108692809
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Entry
108692809 CDS
T11098
Name
(RefSeq) putative elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acoc03016
]
108692809
Transfer RNA biogenesis [BR:
acoc03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
108692809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
SapB_1
Motif
Other DBs
NCBI-GeneID:
108692809
NCBI-ProteinID:
XP_018056790
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
MRNLTIRQVNSRNLKFMKNIKTNQEILKRVQCAINPSFNDIYVLLDEHLSLISSERKFIN
VNNPEYSLSKIVAMDYCVALQELYCAYESGCLAKIVMMDETHIDYDIILSDINLQCMKFS
PDHEIIAAVTTTGVVITMVLNFQVMSEMDLYSEEFGQNEFVTVGWGRKETQFHGSVGKSA
AQAKPIHLIPNELDDGRIRITWRDDGTFFAISFLHKETKIRRFKIFNREGMLCYTSEQIN
GLEECIAWGPMERPIAIPQILGEKYVIAFFEKNGLKYSDLLLPFKPQEAKVRELLWSPCS
DILAVVCYQSKTNITLIQLWTENNGHWYLKQTLVFTEKNPLLYVTWSDRINQFDEKELIY
LTTKELTFCLFNWCVNHSRGKTVDDKVVIGVIDGNNILVTGFKDGIIPPPMAHQYLHTSE
SQNAIVFAPEINDKSSLINSNEFCTVSCNNKLTFFKQIKESSTLTYEVINSYSIDFGTLH
DIEYDVLKIKDLHYYTNNFLWFTKDIILFCTVTNNHNLLCVLSLDKESSSKNSLTIQKIH
VLNYPIEHIISSSDANTAYIKAKEQIFKYTQDGKFEQTNITLNKLCAQIEIVKINSDDVI
LALSLENSFFINGKETAKNITSFYVHSDFVILTTLQHTLVCVPLNEVGLKQLSVYDLTVK
PWLNTMDKMSLTDIYIRRLEKDSRIITAILQDSKVILQMPRGNLECIQPRALSLHILKFY
LDNCNYLTALDIMTKQRINLNLIYDHNPQLFIDNVKKFVEDIIQHKKLNWLNLFLSELQD
ENVISTMYANCYVDHTVKSDIKSNETNDNEIINKVDKICKLLRDVMEKHHDADNLIQPIL
ISLVKNQQRQGLENALSKIKQVKMLEESQKLTLHKSSVSAYEALKYLLHFVNIDVLYDTA
LGMYDFELAMFIASKSSKDPKEYVPFLNNLKKLNTNYMKYSINVYLKRYESALEFLSKEP
AKFEECLDFIHNQKLYKTAMKLFEKNTIQHKKVAAIYGEYLSNERKYFEAGMMFYRSGNL
DKALETFSMSSDNWEDVIAILKEMKLSPVDLHERYKILVEHLKAGRKYEHAAVILKEYLN
DIEEAVAVLCEGRIWKHAIRITIDIQRLDLNETHIKPGVKEHAEHVISQLNKMKTDFLNH
KSRLAVVRTEMKAKQAQLLCEKIYNDEPEYNKEIPDSISDTISIADSVSSRISQLSISSS
KSYRSSKNRRKQARKLLNLKHGSMFEDLGLIHALYQIISNAYKDRDEWYQLVQVLIRFEF
DESAVKILAEEKEFFELVENSKSEIWDRSAPTSLADIEKSAIHTQAQLQEIIAPIKLMER
YIMFPPEADKPPRVLNIF
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacctaacgattcgtcaagtaaacagtagaaatctcaaatttatgaaaaacata
aaaactaatcaagaaatcttgaaacgcgtacaatgtgctatcaatccaagtttcaacgac
atatatgtgctattggacgaacatctctccttgatatcaagcgaaagaaaatttattaat
gtaaacaatcctgaatattctttatccaaaatagttgcaatggattattgcgttgccctg
caggaattatattgtgcctatgaatcaggttgtcttgctaaaatcgtcatgatggatgaa
actcatattgattatgatataatactgtctgacatcaatttacaatgtatgaaatttagt
ccggatcatgaaatcattgctgctgtaacaaccacaggagttgtaatcactatggtatta
aactttcaagtaatgtcagagatggatttatattcagaagaatttgggcagaatgaattt
gttactgttggttggggtagaaaagaaactcaatttcatggttcagtgggtaaatcagcg
gctcaagctaaaccgatacacttgattccaaatgagcttgatgatggtcgtattcgaatc
acttggcgcgacgatggtacttttttcgctattagttttctacacaaggaaacaaaaatt
cgaagatttaaaatattcaacagagagggtatgttatgctacactagtgaacaaattaat
ggattggaagaatgtatagcttggggtccaatggaacgtccaattgctataccccaaata
ttaggcgagaaatatgttattgcattttttgaaaaaaatggccttaaatactcggattta
ttgcttccttttaagccacaagaagcaaaggtaagagagctgctttggtcaccatgttca
gatattttggctgttgtttgttatcaatcaaaaacgaatattacgttgatacagttgtgg
actgaaaataatggtcactggtatcttaaacaaactcttgtctttactgaaaagaatcca
ttgctatatgtaacatggagtgatagaataaatcaatttgatgaaaaggaattgatttat
ttaacaacaaaagaacttactttctgtttatttaattggtgtgtgaatcatagcaggggc
aagactgtggatgataaagttgtgattggtgttattgatggaaacaatattttagttact
ggttttaaagatggaataattccaccgccaatggcgcaccaatatttgcatacttccgaa
tcacaaaatgcaattgtttttgcaccagaaattaatgacaagtcatctttaataaacagt
aatgaattctgtactgtttcatgtaataataagttgacgtttttcaagcagataaaggaa
tcgtctacactgacatatgaagttatcaattcatatagtattgattttggcacattacac
gatatcgaatatgatgtattaaaaattaaagatctacattattatacgaataatttctta
tggtttacaaaagacattatattgttttgtacagttacaaataatcataatcttttgtgt
gttttatctttagataaagaaagttcttcaaagaattctctgacaatacagaaaattcat
gttttgaattatccaatagaacatataatttcttcttccgatgcaaatacagcttacata
aaagcaaaggaacaaatatttaaatacacacaggatggaaaatttgaacaaacaaatata
acgttgaataaattatgcgctcaaattgaaattgtaaaaattaattcggacgatgttatt
cttgccctatctttagaaaatagtttttttattaacggaaaggaaactgctaagaatatt
acaagtttttatgtacattctgattttgtgattctcacaacattgcaacatacattggtt
tgtgttccgttgaacgaagttggtttaaagcagctaagtgtatatgatttaaccgttaaa
ccttggttaaatactatggacaagatgtcacttacagatatatatataagacgactcgaa
aaggattctcgtataataacagcgatattacaagattcgaaagtaattttgcaaatgcct
agaggaaatctagaatgtatacagccaagggcattatcattgcatatattaaaattttat
ctcgataactgtaattatttgacggcactcgatatcatgactaaacaacgtataaactta
aacttaatatacgatcacaatccacaattatttatagataacgtaaaaaaattcgtggaa
gatattatacaacataaaaaactgaattggttgaatctgtttttgtcagaattacaagat
gaaaatgtcatcagtacgatgtacgcgaattgttatgtagatcatactgtcaaatctgac
attaaaagtaacgaaactaatgataacgaaataattaataaggtagataaaatctgtaaa
ttattaagagatgttatggagaaacatcatgatgcagataatttaatacaaccaatattg
ataagtttggtaaaaaatcaacaaagacagggtttggaaaatgcacttagtaaaataaag
caagtaaaaatgttggaggaatcacaaaaattaacgctacacaaatcttccgtatctgcc
tacgaagcacttaagtatttactgcattttgtaaatattgatgtattatatgatactgca
ttaggcatgtatgattttgaacttgcaatgtttatagcgtctaaatcatcgaaagacccc
aaagaatatgttccattcctgaacaatttaaaaaaattaaacacaaattacatgaagtat
tctattaatgtatatcttaaacgttatgaatcagcattagagtttttatctaaagagcca
gccaagtttgaagaatgtttagatttcatacataatcaaaaattgtataagacggcaatg
aaattgtttgagaaaaatactatacagcataaaaaagtagctgcaatttatggagaatat
ttatcaaatgaacggaaatatttcgaagctggtatgatgttttatagaagtggcaatctt
gataaagctttagaaacctttagtatgtcaagtgataattgggaggacgtaatcgccata
ttaaaagaaatgaaattaagcccagtagatttacatgaacgttataagatactagttgaa
catttgaaagcagggcgtaaatatgaacacgcagctgtaatattaaaggaatatttaaat
gacatcgaagaagcagttgcagtattatgtgaaggaagaatctggaaacatgcaatacgg
ataacgattgatattcaacgtttagatttgaatgaaacacatattaaacctggagtgaag
gaacacgcagaacacgtgatttcacaattgaataaaatgaagaccgattttctaaatcat
aaatcacgccttgctgtagtaagaacagaaatgaaagcaaaacaagcacaattattatgt
gaaaagatttataatgatgaaccagaatataataaagaaattccagattctattagtgac
acaatcagtattgcagattctgtttcaagtcgaatatcgcaattgtcaatatcttctagc
aaaagctatcgatcaagtaagaaccgtagaaaacaagcaagaaaacttttaaatttaaag
cacggcagtatgtttgaagatttaggtttaatacatgccctttatcaaattattagtaat
gcatacaaagatagagacgaatggtatcaattggtgcaagtgctaatacgattcgaattt
gatgaaagtgcagtaaaaatcttagcagaggaaaaggagttctttgaattagtggaaaat
agtaaatctgaaatttgggacagatcagctcctacaagtttagctgatatagaaaaaagt
gcaattcatacacaagcacaacttcaagaaattattgcacccattaaattaatggaacgc
tatataatgtttccacctgaggctgataaaccaccacgcgtgctaaacattttttaa
DBGET
integrated database retrieval system
