KEGG   Atta colombica: 108692839
Entry
108692839         CDS       T11098                                 
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 16-1
  KO
K17890  autophagy-related protein 16-1
Organism
acoc  Atta colombica
Pathway
acoc04136  Autophagy - other
acoc04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:acoc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108692839
   04136 Autophagy - other
    108692839
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:acoc04131]
    108692839
   03029 Mitochondrial biogenesis [BR:acoc03029]
    108692839
Membrane trafficking [BR:acoc04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    108692839
 Others
  Specific organelles associated proteins
   Auto phagosome
    108692839
Mitochondrial biogenesis [BR:acoc03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    108692839
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 ATG16 WD40 Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd EIF3I WDR55 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_Aladin ANAPC4_WD40 DSE1_N NBCH_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_EIPR1 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st CFAP251_N Beta-prop_WDR19_1st WD40_RFWD3 ASA1 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_DCAF12 PAC11 RMC1_N Beta-prop_HPS5 Beta-prop_ACSF4 Beta-prop_SCAP Beta-prop_Vps41 CCDC18_2nd Beta-prop_IFT140_1st Cytochrom_D1 UCP007778 Ge1_WD40 UCH DUF4407 Big_4 ODF2_C Fez1
Other DBs
NCBI-GeneID: 108692839
NCBI-ProteinID: XP_018056836
LinkDB
Position
Unknown
AA seq 608 aa
MTSNEVAVSLGVAREDINWRKDLISQLRERNRSQTNCFADLISLHNRLFENANTLRNSNM
QLTIANETLRREAANGGIGMGGNPDLEARLLKQAEELAMLHKRKGEHTQQIVDLNNKLQE
MTKELHGKEVSLAESSEANTNLRLEITKCLAREKDLEGINQMLKDEHQALQLAFASLEEK
LRKTQEENRQLIERLIKYKARDAEKMNEENDNFLSFTSPTTFLMHTLSKFGKRQAKMQKE
LEDAARDTRPVSPDRLSLKEVAGLPTAVPTKVSVTFSAHEGEVFAVKWSPTDRILATGGT
DRKVKLWSINKDTSENKGILVGSNAGVMSVDFDSTGTLILGASNDYASRVWTVSDLRLKH
TLTGHCAKVMAAKFLGEPSKVVTGSYDRTLKIWDLRSKACIETKFAGSSCNDLVTSDGAG
STIISGHFDQRIRFWDTRAESSSNDILLEGKVTSLDLSRDANYLLSCVRDDTVKLIDLRM
KKIVGSFSADGFKVGFDWTRAVFSPDGQYIAVGSADGSVFIWSIVTNAIETILKEHTXFV
HWLSEHGKRKREKSVKRERSAMQRESGIDSNISCPRAFSALSPIRITLMDTLIGGISRRM
QYKDRSYY
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgacctcaaacgaagtagccgtgtcgctcggtgttgcccgggaagacatcaactggcgg
aaagatttgatttcgcaattacgcgagagaaacagatcgcaaaccaattgttttgcagat
ctcattagcctacacaatagattatttgaaaatgcaaatacattgcgaaattcaaatatg
caattgacaattgcaaatgagactcttcgtcgcgaagcagccaatggtggtattggcatg
ggtggaaatcccgatctcgaagctagactcttaaagcaagcggaagaattggcaatgctg
cataaaaggaaaggagaacatacgcaacaaatagtagatctcaataataaattgcaggaa
atgacaaaagaacttcatggaaaggaagttagtcttgcagaaagttcggaagctaatact
aacttacgtttagaaataactaaatgtcttgctagagagaaagatttagaaggcattaat
cagatgctcaaagatgaacaccaagccttgcaacttgcttttgcatctttagaagaaaag
cttagaaaaacacaggaagaaaatcgacagctgatcgagcgtttaataaaatataaagcc
agagatgcggaaaagatgaatgaagaaaatgataactttttaagttttacgagcccaaca
acctttttgatgcataccttatcaaaatttgggaagagacaagcaaagatgcaaaaggaa
ttggaagatgcagcccgagatacgcgacctgttagtccggatcgtttaagcttaaaagaa
gttgctggtcttccgacagcagtgccaacgaaagtatccgtaacgtttagtgcccatgag
ggggaagtattcgctgttaaatggtcgcctactgatagaatattggctactggaggtact
gacaggaaggtgaagctttggagcattaataaagatacatcggaaaacaagggtatcctc
gttggcagtaatgccggtgtgatgtcggtggactttgattcaacaggcactcttattctt
ggagcatccaacgattatgcgagccgcgtttggaccgtcagtgatcttcgcctaaagcat
acactcacgggccactgtgcaaaggtgatggcagcaaagtttcttggcgaaccatcgaaa
gtagttacaggaagttatgatcggactttaaaaatctgggatctgcgcagcaaagcatgt
atagaaacgaaattcgccggttcgagttgtaatgatctcgtaacttccgacggagctggt
tccacgataatcagtggtcattttgatcaaaggatcaggttttgggatactagagccgaa
tccagctcaaatgacattctattagaaggaaaagttacatctttagatttatcccgtgac
gcaaattaccttttgagctgcgtaagggatgacacggtgaaactgattgatttacgaatg
aagaagattgtcggatcgttcagcgctgacggttttaaagtgggattcgattggacaaga
gctgttttcagtcctgacggacagtacatagcggttggttctgctgacggttccgttttc
atctggtctatagtgacgaatgcgatcgaaacaatactgaaagagcatacgtaatttgtc
cactggctctcagagcacggaaagcgaaaacgcgaaaaatccgtgaaaagagaaagaagc
gcgatgcagcgagaaagtggcatagacagcaacatatcttgtccgcgtgctttcagcgcc
ctttcacctatacgaatcacgttgatggacacgttaatcggcggtatctcacggagaatg
cagtataaggatcgctcctactattga

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