Atta colombica: 108692868
Help
Entry
108692868 CDS
T11098
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
acoc Atta colombica
Pathway
acoc03022
Basal transcription factors
acoc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108692868
09124 Replication and repair
03420 Nucleotide excision repair
108692868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoc03021
]
108692868
03400 DNA repair and recombination proteins [BR:
acoc03400
]
108692868
Transcription machinery [BR:
acoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108692868
DNA repair and recombination proteins [BR:
acoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108692868
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
108692868
NCBI-ProteinID:
XP_018056889
UniProt:
A0A195AVR0
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MSSTITGKNLLRPNSLQCTNLQEYLKSRSPDTLNKLYHKPPICLAVFRELPVIAKHYVMR
LLFVEQPVPQAVIASWCSKLYFEEHQKVVQVLNELYVWKEASIPGGLPGWTLNSTFKKNL
KIVLLGGGKPWTMSNQLEIDSKPRDVAFLDSYALERWECVLHYMVGSQQQEGISADAVRI
LLHAGLMKRDEADGSPIITQAGFQFLLLDTASQVWYFILQYLDTIESRGLDLVECLTFLF
QLNFSTLGKDYSTEGMSEGLLTFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGETKPL
TRDTDKEGYIIVETNYRVYAYTNSNLQVALLGLFCEMLYRFPNVVVSILTRDSVRQALKS
GITASQIVGYLRQHAHSKMIEAGPPILPPTIVDQIKLWENERNRFLFSEGVLYSQFLSQT
DFEVLRDHAVSIGVLIWQSERKRTMVVTKAGHDDVKKFWKRYSKGSS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtacaataaccggcaagaatctgttacggccaaatagtttacagtgcacgaat
ctacaggaatatttaaaatctcgtagtcctgacactctgaacaaattgtatcacaagccg
cctatatgtctagctgtattccgtgagttgcctgttattgccaagcattatgttatgaga
ttgttgtttgttgagcaaccagtaccacaggcagttatagcatcctggtgctccaaactc
tatttcgaggagcatcagaaggtggtacaagttttgaatgagctatatgtatggaaggaa
gcgtccatacctggtggactacctggttggactttgaacagtaccttcaagaagaactta
aagattgtattgctgggtggcggcaaaccatggactatgtccaatcaactagaaattgac
agtaagccgagagatgtggcctttttggattcttatgcgttggaaaggtgggagtgcgtc
ttacactacatggttggttctcagcagcaggagggcatatctgccgatgctgtaaggatt
cttttacatgccggtttaatgaagagagacgaagctgatggaagcccaattataacgcaa
gctggttttcagtttctgctcttggatacagcttcgcaggtatggtattttattctacaa
tatcttgacacaattgaatcacgtggtcttgatttggtagaatgccttacctttctgttt
caattaaatttttccaccctcggtaaagattatagtaccgaaggcatgtccgaaggactc
ttaacatttttacaacatttaagagaatttggacttgtatatcaacgaaaacgaaaagca
ggaaggttttatccaactcgattagcgttaaacatcgctactggtgaaactaaaccttta
accagagatacagacaaggaagggtatataattgtggaaacaaattatcgagtttatgct
tatacaaactcgaacttgcaagttgcactgcttggactcttctgtgaaatgttatatagg
tttccaaatgtagttgtttcgatattaacaagagattcggtaagacaagcattgaagagt
ggaataactgcttctcaaatagtaggctatttgcgacaacatgcacatagtaagatgata
gaagcaggaccacctatattaccgcctacaattgtagatcaaattaaattatgggaaaac
gaaagaaatagatttttgttcagcgaaggagttttatatagtcaatttctttcacaaact
gacttcgaagttctcagagatcatgcggtctcaatcggagtattaatttggcaaagtgaa
agaaaaagaacgatggtggttaccaaagctggtcacgatgatgtaaaaaagttttggaaa
cgatattcaaaaggctcaagttaa
DBGET
integrated database retrieval system
