Atta colombica: 108692935
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Entry
108692935 CDS
T11098
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
acoc Atta colombica
Pathway
acoc03020
RNA polymerase
acoc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108692935
09124 Replication and repair
03420 Nucleotide excision repair
108692935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoc03021
]
108692935
03400 DNA repair and recombination proteins [BR:
acoc03400
]
108692935
Transcription machinery [BR:
acoc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108692935
DNA repair and recombination proteins [BR:
acoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108692935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
108692935
NCBI-ProteinID:
XP_018057006
LinkDB
All DBs
Position
Unknown
AA seq
117 aa
AA seq
DB search
MNAPPTFESFLLYEGEKKIIKEQDTKVPNAAIFTINKEDHTLGNMIRNQLLKDPQVLFAG
YKVPHPLEHKFVIRIQTTSDYTPHEAFMHAITDLIAELSLFEEFFKEAIKEKKEGLD
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacctccgacttttgagtcattcttattatatgagggagagaaaaaaattata
aaagaacaggataccaaagtaccaaatgctgcgatttttacgattaacaaggaggatcac
acgttgggaaacatgatccgcaatcagttactgaaggatcctcaagtattatttgctggc
tacaaagttcctcatcccctggaacacaaatttgttattagaatacagacaacttctgat
tatactccacatgaagcgtttatgcatgccatcaccgatttgatcgcagaactctcattg
ttcgaagaattttttaaggaagcaataaaagagaagaaagaaggcttggattaa
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