KEGG   Atta colombica: 108693000
Entry
108693000         CDS       T11098                                 
Name
(RefSeq) nucleoporin Nup37 isoform X1
  KO
K14302  nuclear pore complex protein Nup37
Organism
acoc  Atta colombica
Pathway
acoc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:acoc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108693000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acoc03019]
    108693000
   03036 Chromosome and associated proteins [BR:acoc03036]
    108693000
Messenger RNA biogenesis [BR:acoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     108693000
Chromosome and associated proteins [BR:acoc03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    108693000
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz WD40_RFWD3 Beta-prop_EML_2 ANAPC4_WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML EIF3I Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th NBCH_WD40 TAF1C_beta-prop Beta-prop_Nup120_160 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 108693000
NCBI-ProteinID: XP_018057113
LinkDB
Position
Unknown
AA seq 322 aa
MDEAVTTPPTFKRSFSERIYCVEFSPYEWSQHLICIALAKEIVVGTVKFQDEDDAVEEMA
YSPIRTFHHDARPHAIAWSPETSLSIVPKIVTFCVAGSDFKIRLYNSNLNDVNMFEILEG
HKDYMNAISYEPEGELLASVSDDHTCKLWAVKENQKCVSTFYLTSPGTSVCWHNEESGKL
LVAEKNGLIRMYNVRSHQAIMSLDSGVVPLTAADWGPNPLKVASIAAGELLLWDVSRPSR
PLDERTLHVEGGLTVKISHANENLISSIGWPDNLLKVVNLKSKVVVLCGKVKLIGGTTWH
YKLPYVCAGSDRELCFWRINVN
NT seq 969 nt   +upstreamnt  +downstreamnt
atggacgaggcagtcaccacgccgcctacatttaaacggagtttctcagaacggatttac
tgtgtagagttttcgccgtacgagtggtcgcagcacttgatctgcattgccctcgccaag
gagatcgtcgttggtactgttaaatttcaggatgaagatgatgctgtggaagagatggca
tatagtcctattagaacatttcatcacgatgccaggccccatgcgatcgcttggagccca
gaaacctccctgagtattgtccccaaaattgtcacattttgcgttgctggatcagatttc
aaaataagactatacaatagcaatctgaatgacgtcaatatgttcgagattttagaaggc
cataaagattatatgaatgcaatctcctatgaaccagaaggtgaactattggcatcagtc
tctgatgatcatacatgtaagctgtgggctgttaaagagaaccaaaagtgtgtatctaca
ttttacttaacgtcacctggaactagtgtatgttggcataatgaagaatctggcaagctc
ttagtagcagaaaagaacggtttaatacgtatgtacaatgtcagaagtcatcaagctatt
atgtctcttgattcaggagttgttcccttgactgcagctgactggggacccaatccctta
aaagttgcatcgatagctgctggagaattgttgctttgggatgtgtctagacccagtcgt
cctcttgatgagcggacacttcatgtggaaggtggtttaacagtaaaaatctcacatgcg
aatgaaaatctgatatcaagtattggatggccggataatttattgaaggttgttaattta
aaatcgaaagtagtagtattgtgtggaaaggtaaagttaattggtggtacgacatggcat
tataaattaccatatgtttgtgctggaagtgacagagaattatgtttctggagaataaat
gtaaattag

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