Atta colombica: 108693107
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Entry
108693107 CDS
T11098
Name
(RefSeq) nucleoporin GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
acoc Atta colombica
Pathway
acoc03013
Nucleocytoplasmic transport
acoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108693107
03015 mRNA surveillance pathway
108693107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108693107
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108693107
BRITE hierarchy
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
108693107
NCBI-ProteinID:
XP_018057300
UniProt:
A0A195AV66
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Position
Unknown
AA seq
703 aa
AA seq
DB search
MSFHSERTKVEINKMNDIDITSDFTRLKVSVLEKASRISATTKVDRITIGPQSTLYEEDS
NKADNIENEQNSCNIKSPQITIISPKHNMVATSNGIHFSVNKIDAESELQRKEEVWKVID
RRIQHMNENVRVIQEQMANSRSSMARERERRSEEKLAYFLAEEERLAEQEEIKRRHEQQL
QAQRAQEQKEKLEREMEEYRRKMKEKERLMKTVSVHRDQFTAKYCDLVALSKTCKDQQAF
SAIFTANNTMIRDMFQRIEAIDEKIRNGELVAADENLIESLVCHFSDILNVFRIETEKIN
AQYEAELARKAQAANLIQSVEETDNIPVSNAILCQQPDESNVVENKEDDSSNVITNQEAI
VTSVNEVVAPSVSDPQLEETTKNSACKKDDPFEYIDQESFDIYIRSHQFLKYYRETCKDF
LQSPATKKFRFECQKAINIPVNAISGVSEQHLRDKYDRLQNLLTGQLLPNVTHHPQGVIF
CKNHLAKKIVSQGETLVSSKPEMAFPVAMIVVALWNEHPDFGELFLAHLHEACPFTIPIF
LQQQEGQSNEDYYKSLGCKYSEDGTVEKQDKFLKRMSGLIRLYASITVTKQRKNVTKIHP
YGLQHSWRWLAAVLNIEPRADICDLCATLILDMLEVAGNVLWTAYPKQFYKLLTLLMEQY
FPRMRHVAGGGGGPLVRLEEFLNNALSTGFIRLADGMLPPNFL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttcattcggagaggacgaaagtggaaatcaacaagatgaacgacatagacatc
acatcagactttactcgcctcaaagtatctgtattggagaaggcgtcacgtatatcagca
actacgaaagtggatcgtatcacgatcggacctcaatcgacactgtatgaagaagattct
aacaaagcagacaacattgagaatgagcaaaattcctgtaacattaaaagtccacagata
actattattagtcccaaacataacatggtggctacttcaaacggcattcatttctcggtc
aataagattgatgcagagagtgaactgcaaagaaaagaagaagtctggaaagtaatagac
cgtcgcattcagcatatgaacgaaaatgttcgggtaattcaggaacaaatggcaaattcg
cgctcatcgatggcacgtgaacgcgaacgccggagtgaggagaagttggcgtacttctta
gctgaagaggaacggttggcagaacaggaagagatcaagaggcgacatgagcaacaattg
caggcacagcgtgctcaagagcaaaaagaaaagcttgaacgagagatggaagaatatcga
agaaaaatgaaagaaaaggaaagactgatgaagactgtgtcagtccatcgagatcaattc
acggctaaatattgtgatctcgtggcattatccaagacctgcaaagaccagcaagcgttc
agtgcgatatttaccgcaaataacacaatgataagagatatgttccaacgaatcgaagct
atagatgagaaaatcagaaatggagaattggtagctgcagatgaaaatcttattgagagt
ttggtttgccacttcagtgatatattaaatgtatttcgtatagaaacagaaaaaattaat
gctcaatatgaagcggaattggctcgaaaagcgcaagctgcaaacttgatacagtcagtc
gaagagacagacaatattccagttagtaatgcaatactttgtcaacaaccagatgaaagc
aatgttgtggaaaacaaagaagatgatagttctaatgtgataacgaatcaagaagcaata
gttacatcagttaacgaagtagtcgcaccgtctgtatctgatcctcagttagaagaaaca
actaaaaattctgcatgtaaaaaagacgatccctttgagtatatcgaccaggaatcgttc
gatatttatattaggagccatcaattcttgaagtattatagagaaacttgcaaggatttt
ttacaatcacctgcaacaaagaaatttcgcttcgagtgtcaaaaggcgatcaatattcct
gtaaacgcgatttctggtgtaagcgagcaacacttgagagacaaatatgacagactgcag
aatcttttgactggacaattgttacctaatgtcacacatcatccacaaggagtaattttc
tgtaaaaaccatctggcgaaaaagatagtcagccaaggagagactttggtgtctagcaaa
ccagaaatggcattccctgtggcgatgattgttgtggctctttggaacgaacatccagac
tttggcgaactatttctggcacatcttcacgaagcatgtccattcaccataccaattttt
ctgcagcaacaagagggtcagtccaatgaggattattacaaatctcttggctgcaaatat
tctgaagatggtaccgtcgaaaagcaagacaaattcctaaagaggatgtcgggattgatc
agattgtatgcgtcgattaccgttacgaaacagcggaagaatgttaccaaaattcatcct
tatggtcttcagcattcttggagatggctggcagccgttttgaatattgaaccacgagcc
gatatttgtgatttgtgcgcgactttgatactggatatgctcgaggtcgccggtaatgtg
ctgtggactgcctacccgaaacagttttataagttgctgacgttgttgatggaacagtat
tttccgcgaatgcgtcatgtcgcgggcggtggtggtgggcctctagtacgactggaggaa
tttctaaacaacgccctgtcaactggtttcattcgtctcgctgatgggatgcttccgcca
aactttttgtga
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