Atta colombica: 108693199
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Entry
108693199 CDS
T11098
Name
(RefSeq) nuclear pore complex protein Nup133 isoform X1
KO
K14300
nuclear pore complex protein Nup133
Organism
acoc Atta colombica
Pathway
acoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108693199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108693199
03036 Chromosome and associated proteins [BR:
acoc03036
]
108693199
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108693199
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108693199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
108693199
NCBI-ProteinID:
XP_018057501
LinkDB
All DBs
Position
Unknown
AA seq
1138 aa
AA seq
DB search
MDRPNMTSPLGKTVASPRKRLSIIQSLKKNSSYFIFSTTSIAGRTNQSIQVICRTQSHVV
ENFGSPLPVLVTEALTFVDRNTTVSVNISEEGWAWLVYGRKLLVWQCKANIHSKQRRTFK
SQCRELLLPQSDLAHKADCIAVWVLPGHQVPSCMAVSPEGVVRFWASVAHEGSSVETSAE
LAGQEVDCLIHVPGHGCILATTTCTVALLQPQFNNGKNNITCQVLRTSQGWLGGIGRKMT
SLIFGAIPQSPVTETKLVKVTCTLLNDRGSRVLILAGSSLQYWFFSHNEQEKMEFDEDIT
DIVQQAFQRKIWESSPQNMSTWFVDMQTCEEGIILLMAAHCADISIQIHFALGLLPLVGI
TLSNSFKWFIPVKIDPIFYHNDIESKLVSYHFILCGWEAIIYNRHNVLVINTASEVEQDK
IDLVRGSEDGILGGAICSATPVLFTKSIGLVSIVPVDFAVQDFNTGYTDTTMSMDYTYKV
NQTAQNFSTLISNDELQDMYCSSDTVTQLRAAFLLSLRQNKAQCNEILSQLFPLQEDPIM
DIDAILDTLVLKIAKDLIDDYPANDPRWAHHRDLSITMNAVTSMQIPHQLEGKQKALDLF
IMFLKEHNLWNRFCAVTCRGTIMSTSHMLGEYAEKIVAAVTLYSLQNRYAEIIDAVVNQT
LNEKEAYVSDELTVCDVFYREVSTVHLFLPILVEKAYEVTQSERPLQQVGQYIMQVNTIL
LTVLYEVVKYRQYNAERFVPAKFSNEITEYLPWTAAPGKDGLRSCLNTMQSITIKHGITG
TGDSTVRNELYEQLISLIDLILDGRKCHLESIRGTEKFEVLLKQYETERANLIQPLIKEE
QYDNAAMLAEKYCDFPSLVQICELTDNKNRLDGYIEKFAVQDFAGFLFSWYVKDGRQGQL
VERCRRSGIAELTEKLSEHPTLSWVQAALTDELRFAANTLHTLAVQESELVTRKKSMLSL
AKLALLASDESEDKVMDCVKTIDNELTLIAYQEDLPAQVLTTYGYDIKKLRVLTPRELIM
LYTSNDNVIANEYDFKKALDLLDYIEHEEDKSSLRLQIWARAARRNQWDNVEKNPEQQVQ
ETLLFKLMDLTYFMGGKVDEFLPHIDMLLKEPELGELATSNNFQFLIKLIYEYAYRSY
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtccaaacatgacaagtccattgggaaaaacagtagcctctcctagaaaacga
ttgtcgattattcaatcgctaaagaaaaatagctcttatttcatctttagcacaactagt
atagctggacgtacaaatcaatccatacaagtaatatgcaggacacagagccatgtagtg
gaaaattttggttctccattaccagtcctggttacagaagcactcacatttgtagatcgg
aatacaactgttagcgttaatatatctgaagaaggttgggcctggcttgtttatggccgt
aaattacttgtatggcagtgtaaagctaatattcattccaaacagagaagaacctttaag
agtcaatgtcgtgaattgttgctgcctcaaagcgatctagctcataaagcagactgtata
gcagtctgggtgctgcctggtcatcaggttcctagttgcatggcagtctcgccagaagga
gtggtacgtttctgggcaagtgtggcacatgaaggatcttctgtagagacaagtgctgag
ctcgcaggacaagaagtcgattgtcttatacatgttccaggccatggatgtattctagcc
actaccacatgtacggtagcgctcttacagccgcaattcaacaatggaaagaacaatatt
acatgccaagtgcttcgaacgagtcaaggatggctcggtggtataggtcgcaaaatgacc
tccctcatttttggagcgataccacagtcgcctgttacagagacgaaattggtaaaagtt
acgtgcacattactgaacgatagaggttcaagagttctcattcttgctggatcttctttg
caatattggttcttttctcataatgaacaggagaaaatggaatttgacgaagacatcact
gatatcgttcagcaggcatttcaaagaaaaatttgggaatcaagccctcaaaacatgagc
acatggttcgttgatatgcaaacgtgtgaagaaggaataatccttttaatggcagcccat
tgcgctgatatttctatacaaattcattttgcactcggactattacctttagttggcatc
acactatccaactcatttaaatggtttataccagtgaaaattgatccgatattttatcac
aatgatatagagtcgaaattagtttcttatcatttcatattgtgcggttgggaagcaatt
atatacaatcggcataatgtactcgtgattaacactgcatctgaggttgagcaagataag
atcgatctagtgagaggcagcgaggacggtatactcggcggtgccatatgttcagcaact
ccggtattgttcacaaaaagtatcggtcttgtgtccattgtaccggtggattttgcagtg
caagatttcaacactggatacacggacactaccatgagtatggattacacttataaagta
aatcaaacggctcaaaacttttccactcttataagtaacgacgagttgcaagatatgtac
tgcagttctgatacggtcacacaattacgtgccgcctttcttctcagccttcgacagaat
aaggcacaatgtaatgagattctgtcccaactgttccctctgcaggaggatccgataatg
gacatcgatgctatccttgacacacttgttttaaagattgcgaaggatctaatcgacgat
tatccagccaatgatccgagatgggcccaccatagagatctgtcaataacaatgaacgcg
gtcacttctatgcaaataccacatcaactggagggtaagcaaaaagcgttagatctcttt
ataatgttcttgaaagagcacaacttatggaatagattttgtgcggttacatgtaggggt
actattatgtccacatcccatatgcttggtgaatacgcagagaaaatagttgcggcagtg
acattatacagtctacaaaatagatatgcagagatcatagatgctgttgtgaaccaaacg
ttgaatgagaaagaagcatatgtgtctgatgagctgacagtgtgtgatgtattctatcgt
gaggtaagcacagtgcatctattcctgccaatattggtagagaaggcgtatgaagttaca
cagtctgaaagacctttgcaacaagttggacagtatatcatgcaagtcaataccatttta
ttgactgtattatacgaggtagtaaaatatcgtcagtacaatgctgaacgctttgtccct
gccaagttttccaacgaaataacagaatacctcccttggacagctgcgccgggtaaagat
ggcttgagaagctgtcttaatacaatgcagagtatcaccatcaagcatggtataacagga
actggcgactctactgtgaggaacgaactgtatgagcaattgattagtctgattgattta
atattggatggaagaaaatgtcacttggagagcattcgtggcacagaaaaattcgaggtt
cttctaaagcaatatgagacagagcgcgctaatttgatacaaccgctgataaaggaggaa
caatatgataacgctgcaatgcttgctgaaaaatattgtgactttccatcgctagtacag
atctgcgaattaaccgacaataagaatcgactagatggatacattgagaaatttgcggtt
caagatttcgctggcttcttattctcttggtatgtaaaagatggacgtcagggtcaactg
gttgagagatgcagacgcagtggtattgcggagctaacggaaaagctatcagagcatcct
actctgtcctgggtgcaagctgcgttgactgacgagctgcgatttgccgccaacacactt
cataccttggcagttcaagaatccgagctagtcactcgtaaaaagtcgatgctatcgttg
gccaaactggctctactcgcatcagacgaatctgaggataaagtaatggattgcgtgaaa
acgattgacaatgaattaacactcatagcttatcaggaagatctgccggcacaagtgctc
acaacatatggctacgatattaagaagctgcgggtgctcacaccacgagaattaattatg
ctgtacacttcgaatgacaacgttatcgccaatgagtacgatttcaagaaggcccttgat
ttgctcgattatatagaacatgaagaagataaatcgtcgctgagattacaaatatgggcg
cgcgcggctcgacgaaatcaatgggataacgtggaaaagaatcctgagcaacaagttcaa
gagacgcttcttttcaagttaatggatcttacatactttatgggtggaaaagtagatgaa
tttttgccacacattgatatgcttctgaaggaaccagagcttggggaacttgctacttcc
aataactttcagtttcttataaaattaatatatgaatatgcttatcgaagttattga
DBGET
integrated database retrieval system
