Atta colombica: 108693250
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Entry
108693250 CDS
T11098
Name
(RefSeq) PERQ amino acid-rich with GYF domain-containing protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108693250
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108693250
Surveillance factors
Other surveillance factors
108693250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
108693250
NCBI-ProteinID:
XP_018057586
LinkDB
All DBs
Position
Unknown
AA seq
1396 aa
AA seq
DB search
MTDSMKFGPEWLRKVSSGDSCNTGSGGGGTTTLSTPRYQLAEHRYGREEMLALFDRNCKP
SEPLTTFPLYVEKTQLPLALTTMTDDETRMWNGGITNIGSSRGRGSSVDRGRGRTGRGGL
YSSHYSRGVGFDDSGDGIRTESQSFQGRNRTFDRSQSERGWSERNGASDPVEWNGSTSPR
KDINRGSSNSSLMESNWRRHRGSGEDDDSWRKWGKNNWREGGSMDRDRLDRNEGDGEEGR
GGPGRWEHRGNHRPSHDSGHHPPPRTARTWESNHHDNHDNLPEWATENPSESGSFDASGA
FHGGMYSDDDEDGAAGASQQGRTRRVSEGSASNVVRSNSKSLAFGTGSVQSLNRHTNNTI
ANTLSKERSKPLDSLEDKDDSMQKERRCTSPSVKSTTVPSTESIPTKTLASSSDLLQKKT
IGSTNMDKIETLGEKSSEPPSGSHNKENVQPEIKTEPQIAAVTNRQVPLEHPKLVHNTGT
ANVRQRTEDDLDRMKEEADALVAKLMADEENHKEKTAATSVPPAIGNQSSTVSSTGNPEK
WFYRDPQGEVQGPFLASEMAEWYKAGYFTTGLFVRRTCDERYVTLGDLIKMFGRVPFTPG
PPIPPLKQLAEQVIPPPVPNTVPAGLAPGVIPKAGLEDPLLLMTYQHMQMLHNQMLFRQM
RTSAIAKLSQSEHWSTLTPVEQNQLILQYVIQDGMQEIPEVPIATNPFVPHLTSQATNPV
MQLFTQMQQAKTQPETHLPMNPHTTASAHPTAMDPIQQLIQQMGGLQNLPTMQQPNIAPT
PTPTQEDNPIKSLLRQLNVNTNGHPQATTHMDTVWPQPPPQMVPQFNAQNWLAQVGPIPA
MPPGQLPGSLWDLHAKDMKTEQQILEEQNLKLQEDRKKEELRKQEQLQRQVEEENAKRKQ
KEEQARQAEEAKRKDEERKRKEDEKKRKEEEKRKQEEEQKKKEEKKRKEEEKKREEKRKQ
EEENFKKRQEEEKRKREEFKKQEEKLKREEEKKKKIEEEQRRQEDERLRKEAKIRRQTEI
EEQARRAEQRRREAEALRKLQERTKSPWAQAPRTLAPATHTASLAEIQRLEREKKAEDQR
LQLLMQQQLAQQKAVEAAQEASVIDSSKRLQFKWAEKAITASKPLQVKSLAQIQQEEQER
VVKVKQERERLEKASQKESANMLQNSGIWGTASQCLNWANSNASSSQVWSTNSGTTGFWD
PTPVKSSTPMKQPAKQTVITKSASSQQQQQNNNNKASKSKNKREEELVKKLFEQNTAKTD
EFTQWCNKALSSIQASVDIPTFVGFLRDIESAYEVKEYVRVYLGDTKQSTEFAKQFLEKR
SKWRSAQRPQAQADDLCKPAPAVNPNAPAEFQEVKGKSKKPKKGKMFKVDNRILGFSVTA
APDRINVGDRDYGEGV
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgactgattccatgaaatttggtccagagtggttacgcaaggtttcgtcaggagacagt
tgcaatactggtagtggtggtggagggacaacaaccctaagtacacctcgttatcagtta
gcagagcatagatatggccgggaagagatgctggccttgttcgatcgcaactgtaaacct
tcggagccattgacaacttttccactgtatgtggagaaaactcaacttccattggctctc
acaaccatgacagatgatgaaacgcgtatgtggaatggagggataactaatattggtagt
agccgtggaagaggcagcagtgtggatcgtggacgtggtagaactggaagaggaggcttg
tattcgtctcattattcacgcggagttggttttgatgattccggtgatgggatacgaacc
gagagccaatcattccaaggaagaaataggacgtttgatagatctcaaagcgaacgcggc
tggtcagaaagaaacggcgcttcagatccggtagaatggaacgggtcgactagtcctaga
aaggatataaatcgcgggtctagtaatagttcgcttatggagagtaattggagacgtcat
cgtggaagcggagaggatgatgatagttggcgcaaatggggaaaaaataattggcgcgaa
ggtggcagtatggatcgggatagattggatcgaaatgagggtgatggagaggagggtaga
ggtggaccgggaagatgggagcatcggggaaaccatagaccttcccatgattctggtcat
catccaccacctcgcactgctcgcacttgggaatctaatcatcacgataatcatgacaat
ctacctgaatgggcaacggaaaatccaagcgagagtggcagttttgatgcttcgggtgca
tttcacggtggaatgtattcggatgatgatgaggatggtgcagccggtgcttcccaacaa
ggcagaactcgacgcgtctcggaaggaagtgcttcgaatgtagtgagatctaatagcaaa
tcattagcttttggaacaggttctgttcaatccttgaatcgccatacaaataatacaata
gccaatacattaagcaaggaacgatcaaaaccattggattcgcttgaagataaggatgat
tctatgcagaaagagaggagatgtacctcaccttctgttaagtcgactactgtgccgtcg
actgagagcattcccacaaagactttagcatcgtcctcagatctcttgcagaagaagact
atcggatctacaaatatggataaaattgagactttaggtgagaaatctagcgagcctccg
agcggatctcataataaggaaaatgtacaaccagagattaaaacggagccgcagatagct
gctgtgaccaatcgacaagttcctttagagcatccgaagctcgtacataatacaggaact
gctaatgtcaggcagagaacagaagatgatctagatagaatgaaggaggaagccgacgct
ttggtagccaaattaatggcagatgaggaaaatcacaaggagaagacagccgctactagt
gttccgcctgcaattggtaaccaatcttccacagtttcctccacgggtaatccggaaaaa
tggttttaccgtgatccgcagggtgaagttcaaggaccatttttagctagtgaaatggct
gaatggtataaagctggttacttcactacgggattatttgtgagaagaacttgcgatgag
aggtacgtcacacttggtgatttgattaagatgtttggaagagtaccattcacgcctggt
ccaccaatacctccattaaagcaattagcagaacaagtgattccaccacctgttcctaat
accgtaccggctggattagctcctggtgttattccaaaggctggattagaagatccatta
ctattgatgacatatcaacacatgcagatgctacacaatcagatgttgttcaggcaaatg
agaacatcagcgatagcgaaattgtcgcaatcagagcactggtctacactaactcctgtg
gagcagaatcaattgattctacaatacgtcatacaagatggaatgcaggaaattccggaa
gtgccgatagcgacaaatccgtttgtgcctcacctaacgtctcaggcgactaatcctgtt
atgcaacttttcactcaaatgcaacaagcgaaaacgcaacctgagactcatttaccaatg
aatccacatacaacggcgtcggcccatccaacagcaatggatcctatacagcaacttatt
caacagatgggcggtttacaaaatttgcccactatgcaacaaccaaatattgctccgaca
cctacaccgacgcaggaagacaatccaataaagtctttgttacgtcaacttaatgtcaac
acaaacggtcatcctcaggcaaccacccatatggatactgtttggccgcagcccccgccg
caaatggttccccaatttaatgcgcagaattggttagcgcaggtcggacccattcccgcg
atgccaccaggtcaattacctggttctctctgggatttacatgctaaagatatgaaaacc
gagcagcaaatattggaagaacaaaatcttaagttacaagaagacagaaaaaaggaagaa
ttacgaaaacaagaacaattgcagcgtcaagtggaagaggagaatgcaaaaagaaagcaa
aaggaagaacaagctagacaagctgaggaagcaaaacgtaaagatgaggaaagaaagaga
aaggaagacgaaaagaaacgaaaagaggaggaaaaacgtaagcaggaagaagagcaaaaa
aagaaagaagagaagaaacgtaaagaagaagagaaaaagcgtgaggaaaaaaggaagcaa
gaagaggaaaactttaagaagagacaggaagaggaaaagagaaagcgagaagagtttaaa
aaacaagaagaaaaactaaagagagaagaggaaaaaaagaaaaaaatagaagaagaacaa
agaaggcaagaagatgagagactcagaaaagaggccaaaatacgccgacaaacggaaata
gaagagcaggcgcgtcgtgcagaacaacgacgaagagaagccgaggcattgcgtaaactt
caagagagaactaaatccccgtgggctcaagctccacgcacattggctcccgccactcac
actgcttcgcttgctgaaattcagagactcgagagagaaaagaaagcggaagatcaacgg
cttcagttattgatgcaacaacagttggcacagcagaaggcagtagaagcagcacaagaa
gcatcagtaatcgactcttcaaagcgattgcagttcaaatgggcggaaaaggctattacc
gctagtaaacctctgcaagtgaagagtctcgcgcagattcagcaagaagagcaggagcgc
gtcgttaaggtaaagcaggaaagagaacgactagaaaaagctagtcagaaagaatctgcg
aatatgctgcagaattccggaatatggggtacagcatcacagtgcttgaattgggctaat
tcgaatgcgtcaagcagccaagtgtggtccacaaattccggtactaccggcttctgggat
cctactcctgttaagtcgtctacccccatgaagcagcccgctaaacaaactgtaattaca
aaatctgcctccagccaacaacagcagcaaaataataataacaaagcgtccaaaagtaag
aataagagagaagaagaactagtgaagaaattgtttgaacagaacactgccaagaccgac
gaattcacgcaatggtgtaataaagcattgagtagtatacaggcgtctgtggacatccct
acgtttgttggatttttgcgagacatcgaatcggcgtatgaagttaaggagtacgttcgc
gtttatcttggagataccaagcagagcacggaattcgccaagcaattccttgaaaaacga
agcaaatggcgatcagcgcaacgtcctcaggcacaagcagatgatttgtgtaagccagca
cccgctgttaatccaaatgcacctgcagaatttcaagaagttaagggaaaatccaaaaaa
ccaaagaagggaaagatgttcaaagtagataacaggatccttggcttcagcgtaactgct
gctcccgatcgtattaacgtaggtgatcgcgattatggcgaaggcgtctga
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