Atta colombica: 108693252
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Entry
108693252 CDS
T11098
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
acoc Atta colombica
Pathway
acoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108693252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108693252
03036 Chromosome and associated proteins [BR:
acoc03036
]
108693252
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108693252
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108693252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
108693252
NCBI-ProteinID:
XP_018057592
LinkDB
All DBs
Position
Unknown
AA seq
1907 aa
AA seq
DB search
MFGQTGNTSFSGFSTATQNSPFGQSAFSKSITTTSFGSGATPVFGSSNTSSLFSSKPTGS
TTGGLFGNTTTPPAFRQPTNTQSFGGFGTTNTSTNLFGTQQNAGTNLFGTSTGTSAFGQA
NKPGFNFGTTSGTNLFGQPQQNAQQTTPFGQTNTTTNTNLFGTTTGFGNTNPTTIPAGTA
VKFTPVITTDSMSKNGISHSISARHCCIASMKEYESKSYEELRFEDYQLGRKGPQTGLFG
TSAQTSPFGSAAAGTSTTGTGFGSMTGGFGTTSQSGSTGLFGKPISNFGTPATTTTNSFA
FNSTPTTNLFGTNTQTKPFGTAAPTPLFGTSSTNQTAGTGFGNINTGQNTGFGSTFGSTQ
SNQSIGLFNQNKSAFNIPSTSTSTVFTGFGQPATNTTPLFGNKTTTTGFGTTSTFGATAS
STFGTNTGFNSGSNAGSSLFNSSFKPAGQTSGFSFGTTPASSSGLGTSTGLNLSGGSSLF
GQKSGSLFGNAGNNTTFNTSGTFGSSTFGTTSNMISGTGMSSLSGGVANQTKTNGSVPVH
QQILALVSAPFGDSPLLKNLLPASGKTEELLKPTNPASKILNNPQYRVTANNKSPKIKAR
VVSSTQLSKKSLFDGLEEEDPVITEAFQPRPSAKRLVLRPKLATNSSVQSPTENMESVTN
DTADDRTDTNIIHSNNIEVNDKENHSQDNNQFANDQRSSASWLKSTLPRKNKISNDELLE
GQQSPFSGINVSEEVNNTVVELRTQNNISNHLDPINLIEVPLNSTFDEKNSVNLTMQSAE
SGQETDENSFSMLQSNWSMNMAKVTLRRAGYYTIPSLDKLDDFVCGETCIVPNFTIGREG
YGNVYFPDSFDVYGLNLDEIVHFRHKEVIIYPDDEKKPLVGQGLNRKAQVTLDKVWPHDK
SLHEPIMDPQRLAAMNYEGKLRRVSAKHDTRFLEYRPETGSWVFKVDHFSKYGLSDSDED
DSQIPSTSEAKKLKGFSTAIQKGKLVDPSSMINKEMINGAINGTLDGTKIGNSKHLSMIE
SNFLRKVPINHFAYSDHNYEERGMIVSPVEETPLSCSGFVSRDYNYEKRMTISPIGDNAR
VTGTDSHKLQLMKASFFDVNDEDINDKTSNGIFSSVQKTLTNYFPDVTETKNNEVSYNAT
LRATLIANKALSACPENGFYTSSRKSHLSCIGVKDKQFIEKTIPPPVITPVTNVLKYHYE
VVPLEESRLNKLRFRCVADTGIYMGRTFRPSWGAGLTLLSLSTQEQAIKMQLRNTFSQLS
HYVSGRLSDDVSSTVIVQRLQIVGGDKYDMKMFKDSIECHLRIQLDHCVMSHEGDCPTFD
VMPDSVNEALRLHCTLAQDFVEKEQRPSEDVNDEQMQCGSATERSYRQYASIVWTLCVAL
WGNYIDQDTANNANEEHYNVIVRREAVGEWLRNVVQKTIEQEIKNIDIVTKNSHEKIILS
LLSACKLEDACQEARKAGDHCLALLMAQLRSGATVKKLIKQQLALWQETNVDENLTIDRL
KLFMLIAGEPLISSKHGTINVCEDLDWKRAFAIHLWYLSPPTSSITDALDLYETSFNTME
AQAYAAIPEPEYRENDYDAELNNGKRIHDLCFQLLKLYCTGNHDLGELLNPLSYTANPLD
YRLSWLMQQTLVTLGYTHLSAHVAALTHTNFATQLEAHGLWHWAIFVVLHLRDSSRRRIA
VQDLLLRHIEIDDTPEYVKREQFLKEELGISLVWIYQAKAIKSSINKRYGEAAWYYIQAE
QWTQAHEIIIEHLAADAIINENYEYLKSLLSSLVPTECSGTISGWSYQGQLLWEYMEITS
EIQSLLKSTPDYCGLTYQLETLKPRLTNLCHKIDQFPCLTAKHKLCQAEIAKRTLHLARN
MLLLQKNEQRSVTKLLVRLISQLPLPEDYAQQELRPIVNMRVTEVMP
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacaaactggaaatacatcattcagtggatttagtacagcgacgcaaaacagt
ccatttgggcaatctgcatttagtaaatccattactacaacaagttttggtagtggcgca
acacccgtctttggtagtagcaatacttcatcactctttagttctaaacccacaggttct
accacaggtggcttgtttggaaataccacaacaccaccggcatttagacaaccaactaac
actcagtcttttggaggttttggaacaacaaatacaagtaccaatcttttcggcacccaa
caaaatgctggtacaaatctttttggtacaagtacagggacttcggcatttggtcaagcg
aacaaacctggttttaactttggcacaacatctggaactaatctatttggacaaccacaa
cagaatgcacagcaaactactccgttcggtcaaaccaatactaccacaaatacaaatctt
tttggtacaaccacaggttttggcaatactaaccccactactataccagctggaaccgct
gtaaaattcacacctgtcattacaactgattctatgtcaaaaaatggaatatcacacagc
atttcagcccgtcactgttgcattgcatctatgaaggaatatgaatctaaatcatacgag
gagttacgttttgaagattatcaacttggaagaaaaggtccacaaacaggtctttttggg
acatcggcgcagacatcaccgtttggtagcgcagcagctggtactagcacaactggaaca
ggatttggatcaatgactggaggatttggtactactagccaatcaggatcaactggacta
tttggcaaacctattagtaattttgggacaccagcaactacaacaacaaatagttttgca
ttcaattctacacccactacaaatttgtttggtactaatactcaaacaaagccatttggt
acagctgccccgacgccgctttttggtactagcagcacgaaccaaactgctggaacaggt
tttggtaacattaatactggacaaaatacaggatttggatctacatttggctccacacaa
tctaatcagagtattggattgttcaatcagaacaagtctgcttttaatattccatcgaca
tcgactagtaccgtctttactggttttggtcaaccagctacaaataccacaccattattt
ggaaacaaaactactactacaggatttggaacaacatctacgtttggtgcaactgcgtct
tccacattcggaactaatacaggtttcaattctggctctaatgctggatcttcattgttt
aactcgtcttttaaaccggctggccaaacatcagggttttcctttggaactacacctgcg
tcttcaagtggacttggcacaagtactggtttaaatttgagcggtggttcttcattattt
gggcaaaagtcaggcagtttgtttggaaatgctggaaataatacaacgtttaacacttcc
ggaacatttggttcttctacttttggaacgacttctaatatgatatctggaacaggaatg
agttcgctcagcggaggagtggcaaaccaaactaaaacaaacggttcagtaccagtacat
cagcaaattttggctctcgtttctgcaccattcggtgattcaccattattgaagaatctt
ttaccagcatctgggaagactgaagaacttttaaaacctacaaatccagcatcgaaaata
ttgaacaatccacaatatagagttactgcaaataataaatctccgaaaattaaagctaga
gttgtcagttctacacaactatctaagaaatctttgtttgatggtctcgaagaagaggat
cccgtgataactgaggcttttcaacctcggccaagtgcaaaacgtttagtattacgaccg
aaattagcgacaaattcttcggttcaatctcccacagaaaatatggaatccgtgacaaat
gataccgcagatgataggacagatacaaatataatacacagtaacaatattgaagttaat
gacaaagaaaatcatagccaagataataatcaatttgcgaatgaccaacgatcatctgca
tcttggttgaagtcgacacttccgcggaagaataaaatttcaaatgatgaattgcttgag
gggcagcaatcacccttttctggaataaatgtatccgaagaggtgaataatacagtggtc
gaattaagaacacaaaataatatatcaaatcatttagacccaattaatttgatcgaagtg
ccactaaattctacttttgatgaaaaaaattctgtgaatcttaccatgcaaagtgcagaa
tccggccaggaaacggatgaaaattcattttcgatgttacaatcaaactggtctatgaac
atggctaaagttacattacgacgagcaggctattatactattccatcgctcgataaacta
gacgattttgtttgcggcgagacgtgcatcgtaccgaactttaccatcggtcgcgaaggt
tatggcaacgtatactttccggattcgtttgatgtttatggcttgaatcttgatgaaatc
gtacattttcgtcataaagaggtgattatttatcccgacgatgagaaaaagccactagtg
ggacaaggtctgaatcgaaaggcacaggtcactttagataaggtatggccgcatgacaag
tcgctgcatgagccgattatggatccacagcgactcgccgcgatgaactacgaagggaaa
ttacgtagagtatctgcgaagcatgacacccgtttcctcgagtatcgaccggagacgggc
tcatgggtattcaaggtcgatcacttttccaagtatggtctcagtgattcagacgaggat
gacagtcagattccgtcaacttcagaagcaaagaaattgaagggattctccacggccata
caaaagggcaaacttgttgatccatcgtcgatgataaataaggaaatgatcaatggagcg
atcaacggaacgcttgacggtacgaagatcggaaacagcaagcatctgagtatgattgag
agcaattttttaagaaaggttccaattaaccattttgcctacagcgatcacaattacgag
gaacgaggaatgatcgtcagtccagtcgaggaaactccacttagctgttctggctttgtt
tctagagattataattacgaaaaacgaatgaccattagtccgatcggtgataacgctcgt
gtaaccggtacagacagtcataaattgcaacttatgaaagcaagctttttcgatgtaaat
gatgaagatataaacgacaaaacaagcaatggtatattttcttctgtacagaaaaccttg
acaaattatttcccagatgttacagaaaccaagaacaatgaagtttcatacaacgcgact
ttacgagcgactcttatcgcaaacaaagcactatctgcgtgtccggaaaacggattttat
acgtcgagtagaaaatcacatttatcttgtatcggtgtcaaagacaaacagtttattgag
aaaactattccaccacctgtgattacaccagtgacaaacgtattgaagtatcactatgaa
gttgttccgcttgaagagtccaggttgaataagttgcgatttcgttgcgttgccgacact
ggtatatatatgggcaggacgtttcgaccgagttggggtgccggtctgacattgttatct
ttgagcacgcaggaacaagcaatcaagatgcaactaaggaacacatttagtcaattaagc
cattacgtctctggtcgtctgtcagatgatgtctcatcgactgtaattgttcaacgttta
caaatcgtaggtggtgacaagtatgacatgaagatgttcaaggatagtatagaatgtcac
ttgagaatccaactggatcactgtgtgatgagtcatgagggagactgtcccacgtttgac
gtaatgcctgacagtgtgaacgaagcgttgcgattacattgtacgctagcgcaggatttt
gttgaaaaggaacaaagaccaagcgaggatgtcaatgatgaacagatgcagtgtggcagt
gccaccgaaagatcatatcgtcagtacgcaagtatcgtgtggactttatgcgtagcactt
tggggaaattacatcgatcaagacacagctaataacgccaatgaggaacactataacgtc
atagtgagaagagaagccgtaggtgagtggttaaggaatgtggtccagaaaacaatcgaa
caagagatcaaaaacatcgacattgtaactaagaattctcatgagaaaataatattgtcg
ctactttctgcttgcaaactggaagatgcttgtcaggaagcacggaaggccggagaccac
tgtctagcattactgatggcgcaattacgaagtggtgcgacagtcaagaaactgattaag
caacaactcgcgttatggcaggaaaccaatgtagatgaaaatctcacaattgatcgtcta
aagctattcatgttgattgcgggcgaaccgcttatctctagcaaacacggcactattaat
gtgtgcgaggatctggactggaaacgggcatttgccattcatctatggtatttgtcacca
ccgacttcctcaatcactgatgccttagatctctatgaaacatctttcaatacaatggaa
gctcaagcgtacgcggcaattcctgaacctgaatatagagagaacgattacgatgccgag
ttaaataacggcaaacgaatacacgatctctgttttcaacttttaaaattgtactgcacg
ggaaatcatgatttgggcgaacttctgaatccactgtcatataccgccaatcctttggat
tacagattgagctggttgatgcaacaaacactcgtaactttgggctacacgcatctctct
gcgcatgttgccgcattaacacatacaaactttgcaacacaattggaggcacatggactt
tggcattgggcaatattcgtagtattgcatctacgagattcatctaggcgacgaattgct
gtgcaggacttgctgttacgtcatatagaaatagacgatactccggaatacgtgaaacgt
gagcaattcttgaaggaagagcttggtatatcattggtttggatttatcaagccaaagct
attaaaagtagcatcaataagaggtatggcgaagcagcttggtattacattcaggcggaa
caatggacccaagcccatgaaattattatagagcatttggcagccgatgctataataaat
gaaaactacgaatatttgaaatcattgttaagttcactagtaccaactgaatgtagcggc
acaattagcggatggtcatatcaaggacagctcttgtgggaatatatggaaataaccagc
gagattcagagtctattaaagtccactcctgactactgtggactaacttatcaactggaa
acgctgaagcctcgattaacgaacttatgtcataaaattgatcaattcccgtgtttaact
gctaaacataaattatgccaagctgaaattgcaaaaagaactctacatttagctagaaat
atgctattgctgcagaaaaatgaacagagatctgtcacgaaattattggtccgtctgata
tctcagttaccattaccggaagattatgcacaacaagaactgcgacccatcgttaatatg
cgtgtaacagaagtaatgccataa
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