Atta colombica: 108693514
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Entry
108693514 CDS
T11098
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoc03021
]
108693514
03036 Chromosome and associated proteins [BR:
acoc03036
]
108693514
Transcription machinery [BR:
acoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
108693514
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
108693514
SLIK complex
108693514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_CHD1_Hrp3
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
DEAD
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
108693514
NCBI-ProteinID:
XP_018058012
LinkDB
All DBs
Position
Unknown
AA seq
1810 aa
AA seq
DB search
MIDFQKTLESESGKESGSDSENESKSDSSSSGSNSGSGSGSESDSSSSSGSGSGSGSDSE
KSEKSDAPAAQSDSFQSKGSNHSTEAKLRVKHESSREWDENPDIYGIRRSGRSRKEPDRL
ATNRESDSDGRKKFKKKSSHNSWNSESSDSESDETENRRPPPSKSLNRRAAQKAKEKARV
RKKRISDSSDNSSFDSDDNRRQINRRAGTAVSYKEESEEGTDSEDLVEVDESTAASTEPD
NAETIEQILGQRMGKKGVTGNITTIYAVEDNGDPNPEDLSNLETEVQYLIKWKGWSHIHN
TWESDESLKAQKVKGLKKLDNFIKRERVIEYTREHAEPEELDYLECQLELKQDLLKSYNN
VERIIADYKKPDSVYPDYFCKWENLSYAEATWEDGILIVKKWPEKIKEFCDREDSKRTPS
KHCKVLKSRPKFYQLNEQPTYMGKEKDLILRDYQMDGLNWLIHSWCKENSVILADEMGLG
KTIQTICFLYYLFHTQHLHGPFLLVVPLSTMTSWQREMSQWAPDINFVTYLGDINSRNVI
REYEWCYQDSKRLKFNVILTTYEIVLKDKTFLGALNWAVLLVDEAHRLKNDDSLLYKALT
EFHTNHRLLITGTPLQNSLKELWALLHFIMPSKFASWEEFEKQHDNAAQKGYSKLHKQLE
PFILRRVKKDVEKSLPAKVEQILRVEMTSVQKQYYKWILTKNYEALRKGVKGSTTTFLNI
VIELKKCCNHAFLTKPIDAEREKTNEDYLQQLIRGSGKLVLLDKLLVRLRDTGHRVLIFS
QMVRMLDILGEYLQRRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGI
NLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNKVNIYRLVTKKSVEEEIVERAKQKMV
LDHLVIQRMDTTGRTVLDKKNAGTNSNPFNKEDLNAILKFGAEDLFKDEEDGDEEPTCDI
DEILRRAETRDEGPTTVGDELLSAFKVASFKTAFEEDLEPINQPNDNDDESKDWAEIIPE
NFRRKVEEEEKSKEMEDLYLPPRSRKTLQQLNQSEGKGKKRKKVQDDSEDGEESGSEAEG
SDDDRPKKRGRPRVTPRENIKSFTDIEIRRFIKSYKKFPAPLKRLEDIATDADLQEKPMT
ELRFLGEQLMSRCDACLVEFENTAKENKGGEEEGKGPGRKRGRGPTFKIGGVMVNAKSFS
AAVKELEPLEQALPSDPEQRANWHLDIKLKPANFECEWTSEDDARLLKGIYQHGMGSWEA
IKTDTSLKLGDKIFPNGNKVQLKRVNARAEYLLKILKKQIDLKLGVTRMRKPRKPKEVKA
ITKEIVEDNDSSGDENKKSKSKIDKVSFKRERVNVTKKDIKEEIDDVPDEKKKDKKVKKE
KKDNKKVKKNKQAAGPMHFTANNEPRAVDVIGELDPPVFDECKEKMRPVKKALKALDTPD
MSLSEEERVARARRSLYQIGNHIDSCLAEYKTPEQSKEWKSNLWYFASKFTTFKAKKLYR
MYKNLIKKKDGDSNGGATSSPDKKEDTSSTTKKHNLEKISHEKHFDKQQADNSNKDSRIM
KRKVDDIEENSNSSTQSKKHLSSISAVSSNISSTSTVTIGAITITPITSTPNSTSNTTNS
ADTSRHKEQKESKHKDMKRDRDRDRDRDRGHDRGDRLSMNKDDRIRRDGGYNMGHYSGSR
EDDHWLSRDGRDMRDSRYGFGDHKRDRFDLYGRMSGGYHRDRDRDRDRGMHMNDKRSDYY
RYSSGPPSYGYGPGGYGGSSGGGGYPPTDIASSHFRSRGYAGDGYSNDWRPNKDYRRDYD
RRPPPPNANS
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgattgacttccagaaaacattagaatccgaatctggtaaggaatccggatctgattct
gagaatgagagtaaaagcgatagctcttcttccggtagtaacagcggttcaggatctgga
tctgaaagcgactctagctcctcgagtggttctggttccggatcaggctccgactcggaa
aagtcggagaagtcggatgcacctgctgcacaaagcgatagcttccagagcaaaggctcg
aatcacagcaccgaagcaaagcttagagttaaacatgagtctagtcgcgagtgggacgag
aatcctgacatatacggcattaggaggtccgggcgttccaggaaagaacctgataggctc
gcaacgaatcgcgagagcgacagtgatggtcgcaaaaagtttaagaagaaaagttcacac
aattcgtggaattcagaaagttcagattcagaatctgatgaaactgagaatcgtagacct
ccacctagcaaatccttgaacagacgcgcggcacaaaaagcaaaagagaaagctagagtg
cgaaagaaacgtatttctgattcttctgataattcttcctttgacagtgatgataataga
aggcaaattaatagacgggcaggtacggcagttagttataaagaggaaagtgaagaaggt
actgatagcgaagatttggttgaagttgacgaatcgaccgctgcgtcaacagaacctgac
aatgcagaaactattgaacaaattttgggacagaggatgggcaagaaaggagttaccggc
aacataacgacaatctacgctgtcgaagataatggtgatcctaatccagaggatttaagt
aatctggaaactgaagtacaatatttgatcaaatggaaaggctggtctcacatacataac
acatgggaatcagatgaatctttaaaagcacaaaaagtaaaaggattgaagaagttagac
aattttatcaaacgtgaacgtgtaattgaatatacgagagagcacgctgagccagaggag
ttggattatttagaatgtcaattggaacttaaacaagatcttctgaaaagttacaacaat
gttgagaggattattgctgattacaagaaaccagactcggtatatcctgattatttctgt
aaatgggaaaatttgtcatacgctgaagctacatgggaagatggaattttgatagtgaaa
aaatggccagagaagataaaggaattttgtgacagagaagattccaaaagaacaccgagc
aaacattgcaaagttctcaaatctagacctaagttttatcagttgaatgaacaacctact
tacatgggcaaggaaaaagatttaatattgagagattatcaaatggatggacttaattgg
ttgatacactcttggtgcaaagaaaatagtgttatattagccgatgaaatgggtctcggt
aaaacaatccaaacgatatgcttcctttattatttatttcacacgcaacaccttcacgga
ccatttttactagtagttcctctgtcaactatgacttcctggcaaagagagatgtctcaa
tgggcacctgacataaattttgtcacttacttgggtgacatcaattctcgtaatgtcatt
agggaatacgaatggtgctaccaggattcgaagagattgaagtttaacgtcattcttacg
acgtatgagatagtacttaaagataaaacatttttgggtgccttaaattgggcggtattg
ctagtagacgaagctcatcgattgaagaatgatgattctttattatacaaagcacttacc
gaatttcataccaatcatcgtttattgattactggtactccattacagaatagcttgaaa
gaactgtgggccttattacattttattatgccttcaaaatttgcttcttgggaagaattt
gaaaagcaacacgataatgctgcacaaaagggatactccaagttgcacaaacaattagaa
ccatttattctgcgtcgagttaagaaagatgttgaaaaatctttgcctgctaaagtcgaa
cagatcttacgagtagaaatgacgtctgtgcaaaaacaatattacaagtggatattgaca
aaaaattatgaagcattgcgaaaaggcgtgaaaggatctactacgacattcttgaacatt
gttattgaattgaaaaaatgctgtaatcacgcctttctcacgaaaccgattgatgccgaa
agggaaaagactaatgaagattatttgcaacaattaattcgtggttctggcaaattagtg
cttctagataaattactagtgagattgcgtgatacgggacacagagtactgatattcagt
caaatggtcagaatgttggatattcttggtgaatatctacaaaggaggcatttcccattc
caaagattagatggaagtataaagggggaattaagaaaacaagcgttggatcacttcaat
gctgaaggatcgcaagatttttgttttctattgtcgacacgagccggtggtctcggcatt
aatcttgccactgcagacactgtgataatttttgattctgactggaatccgcaaaatgat
ttgcaggcacaggccagagcgcatcgaataggacaaaagaataaggtaaatatttatcga
ttggttactaaaaagtcagtcgaggaagaaattgttgaacgcgcgaagcaaaaaatggtc
ttagaccatttagtaatacagcgaatggatacaactggtaggacagtgctagataaaaag
aacgcaggaaccaatagtaatccatttaacaaagaagatttgaatgctattttaaaattt
ggcgccgaggatttgttcaaagacgaagaagatggagatgaggaaccaacttgcgatatt
gatgaaatattaagaagagctgaaacgagagatgaaggaccgacaacggttggcgatgaa
ttgttgtccgccttcaaagtcgccagttttaaaacagcatttgaagaggatttggaacct
attaatcagccaaatgataacgatgatgaaagtaaagattgggccgaaatcattccggag
aattttcgaaggaaagtagaagaggaggaaaagtccaaagaaatggaggatctgtatcta
ccaccgagaagtcggaaaactcttcagcaactcaatcagagcgaagggaaaggtaaaaag
cggaaaaaagtacaagatgatagtgaggatggcgaggaatcgggtagcgaagcggaagga
agcgatgatgatagacctaagaaaagaggcagaccgagagttacgccgcgcgagaatatc
aagagtttcactgatattgagatacgacggttcatcaagagttataaaaagtttccagcg
cctttaaaacgattagaagatatcgcaactgatgctgatttacaagagaaaccgatgaca
gaattgcgcttcttgggcgagcaattgatgtctagatgcgacgcatgtttagtagaattt
gagaataccgcgaaagaaaataaaggtggcgaagaagaaggcaaaggaccaggtcgtaaa
aggggacgaggacctacttttaagataggtggtgtaatggtgaacgcaaaatcattctca
gccgctgttaaagaactcgagcctttagaacaagctttgccatctgatcccgaacaacgt
gctaattggcatcttgatattaaattgaaaccagccaatttcgaatgcgaatggacttct
gaggatgatgctagactgttaaagggtatatatcagcatggcatgggttcatgggaggca
ataaaaacagatactagtttgaaactcggcgataagatttttcccaatggcaataaagta
caactcaaacgtgtgaatgcacgtgcggaatatctcttgaagattttgaagaagcaaatt
gatcttaagttaggagtgacgcgaatgaggaaaccgagaaagcccaaagaagtgaaagca
attaccaaagaaattgtagaagataacgatagctccggtgacgaaaataaaaaatcaaaa
tctaaaattgacaaagtaagttttaaaagagagagagtaaacgttacaaaaaaagatatc
aaagaagaaatcgatgatgtacctgatgaaaagaaaaaagataaaaaagttaaaaaggag
aaaaaagataacaaaaaggtgaaaaagaataagcaagccgcaggtcctatgcattttact
gcaaataatgaaccaagagctgttgatgtaatcggtgaattagatccgccagtatttgat
gagtgcaaagaaaagatgagaccagtaaagaaggcgttaaaggccttagatacaccagat
atgtctctgagcgaagaagagcgagttgctcgcgcacgtcgaagtctttatcaaattggg
aaccatatcgactcgtgtctggcggaatataaaacccctgaacaaagcaaagaatggaaa
agtaatctttggtactttgcttccaagtttacgaccttcaaagcgaaaaagctttacaga
atgtataagaatctaataaaaaagaaggatggcgacagcaatggcggtgccacatctagt
cctgataaaaaagaggatacttctagtactacaaagaaacacaatctggaaaagatatct
cacgagaaacatttcgacaagcaacaggcagataacagtaataaagatagcagaataatg
aaacgtaaagttgatgatatcgaagaaaactcgaatagcagtacgcaaagtaagaaacac
ctttcaagtatttccgctgtcagcagcaatatcagcagcacgtccacagttactatcggt
gctattacgattacgcctataacgtcaacgccaaattccacatcgaatactactaatagc
gcagatacatcgcgacataaagaacaaaaagaatcgaagcataaagatatgaaaagagat
agagatcgtgatagagatagagatagggggcatgacagaggtgatagattaagtatgaac
aaggatgatagaattaggagagacggtggatacaatatgggacattatagtggtagtagg
gaagatgatcattggttatccagagatggaagagatatgagagacagcaggtacggattc
ggagatcataagcgcgatcgcttcgatctttatggtcgaatgtcgggtggttatcacagg
gacagagacagagatcgagatcgtggtatgcacatgaatgataaaagaagtgattattat
cgatactcgtcgggaccaccgagttacggatatggaccaggtggctatggaggtagcagc
ggtggtggtggttatccgcccacggatattgcatcaagtcatttcagaagtcgtggttat
gcaggagatggttactccaatgattggcggccgaataaagattacaggcgggactacgat
agaagaccaccgccgccaaacgccaactcctag
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integrated database retrieval system
