Atta colombica: 108693670
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Entry
108693670 CDS
T11098
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
acoc Atta colombica
Pathway
acoc03013
Nucleocytoplasmic transport
acoc03015
mRNA surveillance pathway
acoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108693670
09122 Translation
03013 Nucleocytoplasmic transport
108693670
03015 mRNA surveillance pathway
108693670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108693670
03041 Spliceosome [BR:
acoc03041
]
108693670
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
108693670
Spliceosome [BR:
acoc03041
]
Common components
Common spliceosomal components
Cap binding complex
108693670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
108693670
NCBI-ProteinID:
XP_018058213
UniProt:
A0A195ATW7
LinkDB
All DBs
Position
Unknown
AA seq
165 aa
AA seq
DB search
MSIKLNATSSPSVELSSYRDQHFKGTRAEQDRLLRNSCTLYVGNLSFYTTEEQIYELFSK
CGDIRRIIMGLDKYKKTPCGFCFIEYYNRADAESCMRYINGTRLDDRIIRTDWDAGFIEG
RQYGRGKTGGQVRDEYRSDFDSGRGGYGKIIQQKVTSLSDGGFGR
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaaactaaatgcaactagctcgccatcagttgaattaagctcttatcgtgat
caacatttcaagggaacaagagctgaacaggacagattactaagaaattcctgtacttta
tatgtagggaatctgtccttttatacgacagaggagcaaatatacgaattattttccaaa
tgtggagacataagacgaataattatgggtcttgataaatataagaagacaccatgtggt
ttctgttttattgagtactacaacagagccgatgcagaaagttgcatgaggtatataaat
ggaacccggttagatgaccgaatcatcagaaccgactgggacgcgggctttatcgaaggc
cgacagtatggtcgtgggaaaacaggaggacaagtgagggacgagtaccgttcagatttt
gatagtggacgaggtggttatggtaaaataatacaacagaaagtaacatcgctttctgat
ggtggatttggacggtga
DBGET
integrated database retrieval system
