Atta colombica: 108694176
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Entry
108694176 CDS
T11098
Name
(RefSeq) WD repeat-containing protein 43 isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
acoc Atta colombica
Pathway
acoc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108694176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acoc03009
]
108694176
Ribosome biogenesis [BR:
acoc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108694176
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Utp12
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_DCAF4
EIF3I
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Beta-prop_WDR11_2nd
Beta-prop_RSE1_1st
WD40_MABP1-WDR62_1st
TAF1C_beta-prop
WDR54
Motif
Other DBs
NCBI-GeneID:
108694176
NCBI-ProteinID:
XP_018058984
UniProt:
A0A151I5U5
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MASTGCSAFSQDGQYYAFCGNDGKLKIWETASGRLKHEYTPNRHLSSPCSVIGWIFVSPQ
SAGNVSPSPRKRRRRKSISEQVDRKAVVAMGSMSGKITLYDIAAASVSTTLENGHSSTIT
AIAWSAHAGLITAANDYHIVEWNLQENGIKCKWKSGKAKVTALAIPSNGKSLLSAEKIIK
WWNLTTKQLIRTFTGHANHVTFLHTIQIDSATSYLISAAHADNHLSVWILDKNKNDKASI
ATLAIQDEATSISILVAEELQVGILVTTQSGQAQLFKYQPNGHTKPVKPSLNIAVAADIN
QKETVQQIPILAGHLTEDEKLLLAYGSYFNLTFEKVMPDFSDKVQCLIRSERLDTKKSKE
RKEEAISKVKPTAIEEDVEYLAPGIQVSTQKRNRTTSGSQLLLKDRLENLSLNADANTPG
RTPTKGANMTQLLMQALNSKDKTILTTVLFTKNEAVIRNTIARLPVQAIIPLLKELTIML
QGKTYANKIAVMWLQTLIMTHAAHLMSRPDIAEILSPILSFIDAKLALLTAIQRLKGRVS
LITGQISQANEEHNKDITEESLLVYQDPDSSDEGADKDDVDLSSESDDNWEEMSDQDVQD
EHDEEDNKSVKFDDDDVDDNESIHS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcacgggatgttccgctttctctcaggatggacaatattacgcattttgcggc
aatgatggcaagttgaaaatctgggagactgcaagcggccggttgaaacatgaatatact
cctaatcggcacttatcatcaccctgcagtgttataggatggatctttgtgagcccacaa
tcggcgggcaatgtatcgccttcgccaagaaaaagacgtaggaggaagtcaatttcggaa
caagtcgatcgcaaagctgttgtggcaatgggttcgatgagtggaaaaattactttgtac
gacatagctgctgcatctgttagcactactttagagaatggtcattcttccactatcaca
gcaatcgcttggtcagcacacgctggattgattacagcagctaatgattatcatatagtg
gaatggaatcttcaagagaatgggatcaaatgtaaatggaaatctggcaaggcaaaagtc
acagccttggcaattccatcaaacggaaagtccttactatctgctgaaaaaataatcaag
tggtggaacttaacgacaaagcaattgatccgcacgtttactggacatgccaatcatgtc
acttttcttcatactatacaaatagacagtgcaactagttacttaataagtgctgcccat
gcagataatcatctttctgtatggatattagacaaaaataaaaatgataaagcgtcgata
gcaacactagccattcaagatgaggctacatccatctcgatacttgttgcagaagaattg
caagtcggcatattggttactactcaatcgggtcaagcacaattattcaagtatcagcca
aatggtcatactaaaccagtgaaaccatctcttaacattgcggtagcggcagatatcaat
cagaaggaaactgttcaacagattccaattttagcaggtcacttaactgaagatgaaaag
ttattactggcgtatggtagttattttaacttaacattcgagaaagtaatgcccgacttt
tccgacaaagtgcaatgtttaattagatcggaaagattagatacaaaaaaatcaaaagaa
aggaaagaagaggcaatttctaaagtaaaacctactgcgatcgaagaagatgttgaatat
ctcgcaccaggaatacaagtttcaacacaaaaaagaaatagaactacttcaggctctcaa
ttacttttaaaagatagattggaaaatcttagtttaaatgcagatgccaacacaccaggg
aggacaccaacgaaaggagccaatatgacgcagttattgatgcaagcattaaatagcaaa
gataaaactattttaacaacagtgttatttacaaaaaatgaagctgtaattcgtaatacc
attgcaagattaccagtgcaagcaattataccgttgcttaaagaattaactattatgttg
caaggcaaaacatatgcgaacaaaattgcagtaatgtggttgcaaactttaataatgact
catgcagcgcatttaatgtcgcgaccagatatcgcagagatactcagccctattcttagt
tttattgatgcaaagttagcacttttaacagctatacaaagattaaaaggcagagtttct
cttataacaggacaaatatctcaagctaatgaggaacacaacaaggatataactgaggaa
agtttgcttgtttatcaagatccagattcatcggatgaaggtgccgataaagatgatgtt
gatttaagcagcgaatccgatgacaattgggaagagatgtccgatcaagatgttcaagat
gaacatgacgaagaagataacaaaagcgttaaatttgatgacgatgatgtggacgataac
gaatctatacacagctga
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