Atta colombica: 108694284
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Entry
108694284 CDS
T11098
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acoc03009
]
108694284
Enzymes [BR:
acoc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
108694284
Ribosome biogenesis [BR:
acoc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108694284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
108694284
NCBI-ProteinID:
XP_018059162
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MGRKGKFDKDLSGRGRKAKKQSDPTFPKGILGKESTLSHRQKQRARKRLLKNQQLKENAK
KLLKKKTTVEEQVQSKNVSKLSKKTKQNKKLKSMTNKSKTNIKSENYNDNNYSEDEEMEI
YSNKQVTKLGKKAKQSKNKNMKVKTSIKNESFSINNHSEDEEMETYSNKQVTKLGKKVKQ
SKKKKNMKVKRNEESESDDDNMLFNDDDIEEDKDEQMNEVNTSEDEEHMSEDENETSENE
ENMSENEEDTSENKEDTSENEEDTSENEEDTSKDDNQLLSATKSKKNLKKTKKFMEDNIE
SDSEEIVSNDEEESTEDEQMEEDGEENDESDDDDLLPIEKANKKLKKKKEKEQKLAKEEM
EDMMTHQSVFSFPNDEEFTNVTNLKDIQQRIRDVIMVLSDFKKLREKNRSRSEYTELLRM
DLCTYYSYNDFLMEKLMQMFPLDELLEFLEASEVQRPMTIRTNTLKTRRRDLAEVNLXXX
VNLDPIGKWTKIGLVVYSSQVPMGATPEYLAGHYMIQGASSFLPVMALDPKENERILDMC
AAPGGKASHIAAIMKNTGTLFANDLNKERLKAVIGNFHRLGIVNCVICSYDGRKFPTIIK
GFDRVLLDAPCTGTGVVAKDPSVKANKAEVDIQRCCTLQRELLLAAIDCVNARSESGGII
VYSTCSILPEENEWIIDYALKKRDVKLLPTDLEFGTDGFTSYRQYRFHPSLKLTKRFYPH
VHNMDGFFVAKLKKFSNNILNQKNVKEEMSD
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcaaaggaaaatttgataaagatcttagtggtcgtggaaggaaggcaaagaaa
cagagtgatccaacatttccaaaaggaattctaggtaaagaatctacattaagtcaccgg
cagaaacaaagagcaaggaaaagactattgaagaatcaacaactaaaagaaaatgcaaag
aaattgctcaaaaagaaaactactgtagaagaacaagtacagtcaaaaaatgtttcaaag
ctaagtaagaaaaccaaacaaaataaaaaattgaaaagcatgactaataaaagcaagacc
aatataaaaagtgaaaattataatgataataattatagtgaagatgaagaaatggaaata
tactctaataaacaagtaaccaaactaggcaaaaaagcaaagcaaagcaaaaataaaaat
atgaaagttaagactagtataaaaaatgaaagttttagtattaataatcatagtgaagat
gaagaaatggaaacatattctaataaacaagtaactaaactaggcaagaaagtaaagcaa
agtaaaaagaagaaaaatatgaaagttaagcgcaatgaagaaagtgaaagtgatgatgat
aatatgttatttaacgatgatgacattgaggaagataaagatgaacaaatgaatgaagtg
aatactagtgaagatgaagaacatatgagtgaagatgaaaatgaaacaagcgaaaatgaa
gagaatatgagcgagaatgaagaggatacgagcgagaataaagaggatacgagcgagaat
gaagaggatacgagtgagaatgaagaggatacgagcaaggatgataatcaattgctttct
gcaacaaagtcaaagaaaaacttgaagaaaacaaaaaaatttatggaggataatatagaa
agtgatagtgaagagatagtttccaatgatgaggaagaatccaccgaagatgagcaaatg
gaggaagatggagaagaaaatgatgaaagtgatgatgatgacttacttccaatagaaaaa
gctaataaaaaactgaaaaagaaaaaagaaaaagaacaaaaacttgctaaggaagaaatg
gaagatatgatgacacatcaaagtgtattctctttcccaaatgacgaagaatttactaat
gttactaatttaaaagatattcaacaacgaatacgagacgttatcatggtgttatcagat
ttcaagaaattacgggagaaaaataggtcacgttctgaatatactgaactacttcgaatg
gatttatgtacatattacagttataacgattttctaatggaaaaattgatgcaaatgttc
ccactagatgagttactagaatttttggaagcgagtgaagtacaaagacctatgactatc
cgaacgaatactttgaaaaccagacgacgcgatctagctgaggtaaatttannnnnnnnn
gttaatcttgatccaataggaaaatggacaaagatcggtttggtagtatattcctcacaa
gtacctatgggtgcaacaccagaatatctagctggacattatatgatacaaggcgcttct
agcttcttgcctgtaatggcgttagatccgaaagaaaatgaaagaattcttgacatgtgt
gctgcaccaggcggaaaagcctcgcacattgctgctattatgaaaaatactggaactcta
ttcgctaacgatttaaataaagaacgattgaaagctgttattggcaatttccatagactt
ggtattgttaattgtgtaatctgtagttacgacgggcgaaagttccctacgattataaaa
ggcttcgacagagtcttattggatgctccgtgtacaggtacaggagtagtcgcaaaagat
cctagtgtaaaagcgaataaggcagaagtagacattcaacgctgttgcacattacaaaga
gagctgttattagctgcgattgattgtgtgaacgcgcgttcggaatcaggtggtattatt
gtttattcgacttgctcaattttaccagaggagaacgaatggataatcgattacgctctt
aagaagcgcgatgttaagttattacctactgatttggaatttggaactgatggtttcacg
agttacagacaatatcgatttcatccctcactgaaattaactaaacggttttacccgcat
gtacacaatatggatggtttctttgtagcaaaattaaaaaaattctccaacaatattctt
aatcaaaaaaatgtaaaggaagaaatgtctgattaa
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