Atta colombica: 108694322
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Entry
108694322 CDS
T11098
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
acoc Atta colombica
Pathway
acoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108694322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108694322
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
108694322
U7-dependent histone pre-mRNA processing factors
108694322
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
DUF908
DUF8400
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
108694322
NCBI-ProteinID:
XP_018059227
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MSNSTISDQTLMDKSMRSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGY
GFCEYKDQETALSAMRNLNGYEIGGRTLRVDNACTEKSRMEMQSLLQGQSTENPYGEAVQ
SDKAPEAISKAVASLPPEQMFELMKQMKLCVQNNPNEARQMLLQNPQLAYALLQAQVVMR
IVDPHTAVSMLHKANPIPGILTPSEKPTQQVQPRIEEPWAQRPPPPINAPTPIFAGQDVD
LRLERQIDPCVTRKNQDLRGSLDKEFKLKIESVKTGQDVDLRLDRQIDPRVARLDQDLRG
SPQTQPAPVSAPVIPVTTDLRGANAFNMADNLLSVEGIERSHIHIYVYIYIYIXXYISDS
RDLRDSRPIDPRITKPPPAPVAPPIVPRPVVAPTVPASSTVTSNTTGSSAAALSQPASSA
TSRLVAGMSPAGSIPSGASDQEKAALIMQVLQLSDEQIAMLPPEQRQSILVLKEQIAKST
QR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattcaactatttcggatcaaacactgatggacaagtcgatgcggagtgtcttt
gtcgggaatatcccgtacgaggctacggaggagaatctgaaggatatcttcagtgaggtt
ggaccggtgctttcattcaaattagtatttgaccgtgagacaggcaagcccaagggatat
ggcttttgtgaatataaagatcaggagactgctctaagtgctatgagaaacctaaatgga
tatgaaattggtggacgaacattacgcgtggacaatgcttgcacagagaaaagtcgtatg
gaaatgcaaagtctcctgcagggtcagagtacagagaatccttatggagaagccgttcag
tcggataaggcaccagaagcgataagcaaagctgtggcatctttgccaccggaacaaatg
tttgaactgatgaaacagatgaaactttgtgttcaaaataatccaaatgaggcacgtcaa
atgctcctgcagaatccccagttggcgtacgctctgctccaagcacaagttgtcatgaga
atagtggaccctcatacagctgtcagtatgttgcacaaggctaatcctatcccaggtata
ctaacaccatcggagaaaccaactcagcaggtacaaccacgaatcgaggagccatgggca
cagcgacccccaccacctattaatgctccaacacctattttcgcaggtcaggacgtagat
ctccgactagagagacagatagatccgtgtgtaactaggaagaatcaagatttgagagga
tcactggacaaggaatttaaattaaaaattgaatccgtaaaaacaggtcaggacgtagat
cttcgactagacaggcagatagatccgcgtgtagctagattagatcaagatttgagagga
tcacctcaaacgcaacctgcgccagtcagcgcgccggtgataccagtcaccaccgatctg
agaggggcaaatgcatttaatatggcagacaacctactttctgtggaaggaattgagagg
tctcatatacatatatatgtgtatatatatatatatatatagtgatatatctcagattcg
agagatcttagagattccaggcccatcgatcctagaatcaccaaacctcctccggctcct
gtcgcgcctccgattgttccgagaccggttgttgcaccaactgtgccagcatcaagtact
gtaactagcaatacgaccggttcgtctgccgctgcgctttcgcagcctgcgagttctgca
acttcgagactagtggctggaatgtctccagcgggaagtattcccagtggtgcgtctgat
caggaaaaggcggccttgataatgcaagtattgcaattgtcagatgagcaaattgcaatg
cttccacctgaacagagacaaagtattctagtgctaaaggaacagattgcaaaaagtaca
caacgttaa
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integrated database retrieval system
