Atta colombica: 108694498
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Entry
108694498 CDS
T11098
Name
(RefSeq) breast cancer type 2 susceptibility protein homolog isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
acoc Atta colombica
Pathway
acoc03440
Homologous recombination
acoc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108694498
03460 Fanconi anemia pathway
108694498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoc04121
]
108694498
03036 Chromosome and associated proteins [BR:
acoc03036
]
108694498
03400 DNA repair and recombination proteins [BR:
acoc03400
]
108694498
Ubiquitin system [BR:
acoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108694498
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
108694498
DNA repair and recombination proteins [BR:
acoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
108694498
FA (Fanconi anemia) pathway
Downstream FA components
108694498
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA-2_OB3
BRCA-2_OB1
BRCA2
BRCA2DBD_OB2
Tower
Motif
Other DBs
NCBI-GeneID:
108694498
NCBI-ProteinID:
XP_018059536
LinkDB
All DBs
Position
Unknown
AA seq
1736 aa
AA seq
DB search
MDLSETDNAEDDSDELFSDDEQKKEIRHRSNICQDTSVLSLSETPLSLLDYSPSMIMPTD
AIIPSTPLSLLPFLNKINEQWSSDLETPQAQPHMISTINATTEETPRGEQRTPDVSSVKS
VEKIISDSPVIASKASRRRSKRRIFRSSISIDPLAVTDNEDTTANVQVETPIISDDANSV
AQDDTTNAAISTSLETVLKDDEPKVFGKNQDTCNDEESKNVTNDVPDNLNTSTQEFFSNV
SFSKIDELCLDTFNNQKTIETTVTQCNYEQNIDKERNIEEDENIGFVTACGTSINISKQA
LFKAKRLFADMDESTFDMNEMQTKNCEPPTKRNKSNEEKDRHLLFSSFVNNVSVNIAKEV
LPKPKPLRNIEQLKNYDKVYTADCKKPLVSKSSNEEVNEAPILLSTASGNPINISKKALL
KAKALLTDDLPSSSFVNNVSVNIAREALSKPKPLIEQLKNYDNVYTADCKKPLVSKSSSE
EVNETPILLSTASGNPINISKKALLKAKALLADESHNIDDDELIKYYERSTDNKSTTIKI
KTLPSFSATSGKFILGESPVKARTLFAEHLDDTVEVVVAEETNAYNKETKGLEIKMSNIK
FKSPGSAVGISEQISKVKIFDKQLDDQVEPVIANKVNKINEIENMQEIKIPSIGFQTAGG
TYIDISERALSRAKVLFAELDCSLEMDIIKNSDRDEEKIKKHDLAIPYGGLQTASGQEVP
VSNNAALTARELFSNDCLDESNPDLGRASLQKRKLSETNVDGSTPQGRNYTSETKRARLS
SEFQGRKLFFDNTSIRTNNDENRDPDKKRQASSVVESTSGSPKTDSIESTESETAGSPII
GRQSSLRKRKSLGYQRDESNASRADNKMLDNENATLQENVVQGSATCGKIEDDKLNTEEP
TQVTQEKAKGNNAGLSEYGNTQMMMDFIDQSTKVLQDRLAAALEQEAIITAKRRRAQSEG
SKQSMGHLYRYKQINSNARLSMRQIGGGAPPIPCSYQELIDRRISPRILEITAATAATYK
FRCSDFYGDDVAHRNVRGIEMEDSVRLILDENGYTGIWEFLRAFLASPGVDPNLVPARWV
ENHYRWIVWKLASMDRMKFGSVKLPRALTPSYVMAQLKYRYDREIDRSQRPAIRRILEKD
DVPSKRMTLCVSSIIENNNVSMEIGKSPRIGVSKWRIELTDGWYSTNASIDIGMVKNIST
GKIREGTKLLLSGAELLNCDQGFYPLEAPADVCLKLHTNSTRRARWDTKLGYAPRSGPIP
IKLRNVCPSGGLIGKMTIVVARMYPMLYYEKTASGDSIVRNAKSEEKAQNKYEQQCWSKI
ESFYAQAEDFQGKGLSGETDDMAIQLSEDYENLSTEESVSKKRHDELLQELRQKEERFKQ
KMQSKLRESLPGPRQVSQLLKVRVCDKNANAILSVWSPSEEIVDALKEGACVSLCNIVAS
GKRGTELQLTARRSAIFKPGRMRDASYPARVCTSLDEIANSEFVPPYGEFDTVGLVCSVG
PAPYGMRDFDAVHLAYCKAGSNESSYLSILFWQGIPSYGYTEILTVGSIVACSNLEWRRA
TSWNIPAAYCTDRSTFTLNPRRNHLYESFENLRNRITDPIKYAESCTFELNVELQKKSTP
TRYSAGKNTPIKMYSSTSSADKKLVDYTSPLATPKLGMDNRLSFNPSNPSIKKRLEKLQQ
YGEAPQLSPIILRNSKRICLDFRSPILPISDINSTKETTKANQPEELKSSISEKHS
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggatctatcagagactgacaatgccgaagatgactctgacgaattgttctcagatgat
gaacaaaagaaggagattagacatagatccaacatctgccaggatacctcagttttaagt
ctgtctgagacacctttatcgttacttgattacagtcccagtatgataatgccaactgat
gccataattccatctacaccattgagtctgttgccatttctaaataaaataaatgaacaa
tggagtagtgacttagagaccccacaagctcagcctcatatgatatcaaccattaacgca
acaacagaagaaacacctagaggtgaacagcgtacacccgatgtttcaagtgttaaaagc
gtagaaaaaattatttctgattctcctgttattgcttctaaagcgtcgcggagacgttcg
aagcgtcgtatatttagatcttctatatctatagacccattggctgtaactgacaatgag
gatactactgcaaatgtacaagtagaaacacctattatttctgacgatgctaattctgta
gcacaagatgacactacaaatgctgcaatatctacttctcttgagactgttcttaaagat
gacgaaccaaaagttttcggtaaaaatcaagacacatgtaatgatgaggaatcaaaaaat
gttacgaatgatgtacctgataatttaaacacatccacgcaagagttctttagcaatgtc
tcatttagtaaaatagacgagttatgtttggacacttttaacaatcaaaaaacaattgag
actactgtcacacaatgtaactatgaacagaacatcgacaaagaaaggaacattgaggag
gatgaaaatatagggtttgttactgcttgtggtacttcaattaatatatcaaagcaagcg
ttatttaaagcgaagagactattcgcagatatggatgaatccacctttgatatgaatgaa
atgcagacgaagaattgtgaaccacccactaaaagaaataaatctaatgaagagaaagat
agacatttattattctcttcattcgttaataacgtttccgtcaacattgcgaaagaagtg
ttacccaaaccgaaaccgcttagaaacatagaacaattgaaaaattatgacaaagtgtac
actgcagattgtaaaaaaccacttgtaagtaaaagttctaatgaagaagtcaatgaagct
cctattttattatcaactgctagtggcaatcctattaacatatcgaagaaagcgttatta
aaagcaaaagcattattaacggatgatttaccatcctcttcattcgttaataatgtttcc
gtcaatattgcgagagaagcattatccaaaccgaaaccacttatagaacaattgaaaaat
tatgacaatgtgtacactgcagattgtaaaaaaccacttgtaagtaaaagttctagtgaa
gaagtcaatgaaactcctattttattatcaactgccagtggcaatcctattaacatctca
aaaaaagcattgttaaaagcaaaagcgttattagcggatgaatcacacaatattgatgac
gatgaattaataaaatattatgagagatctaccgataacaaatctacaacaataaaaatt
aagaccctaccatcattttctgcaactagtggtaaatttatcttaggagaatcaccggtc
aaagcaagaacattgttcgcggaacatttggatgatacagtagaagtagtcgttgcagag
gaaaccaatgcttataataaagaaacgaaaggattagagataaaaatgtcaaatattaaa
tttaaatctcctggtagcgctgttggtatttctgaacagatatcgaaagtaaaaatattc
gataaacaattggatgatcaagtggaaccagtaattgcaaataaagttaataaaatcaac
gaaatagaaaacatgcaagagataaaaattccaagtattggatttcaaaccgctggtgga
acatacattgatatctcagaacgagcgttatccagagcaaaagtattatttgcagaatta
gattgctctttagaaatggatattattaaaaatagtgatcgcgatgaagaaaaaattaaa
aaacacgacttggcaattccatatggtggattgcaaactgcaagtggtcaagaggtaccg
gtttcgaacaatgctgcattaacagcacgagaattattctccaacgactgcctggatgaa
agtaatcctgacttggggcgcgcatcgttgcaaaagcgcaaactaagcgagactaatgta
gacgggagcacaccgcagggcaggaattacacgtccgaaacgaaaagggctcgtctcagc
agcgaatttcaaggaagaaaattattttttgataatacgagtattaggacgaacaacgac
gaaaatcgagatcctgataaaaaaaggcaagcctcttctgttgtagagtccacctcagga
tcgcctaaaacggactcaatagaatcaacagaatcagaaacagcgggtagtcctattata
ggaaggcagtccagcttgaggaagcgaaagagtttaggatatcaaagggatgaatctaat
gcatcgcgagctgataacaagatgttagataatgaaaatgcaacattgcaagagaatgtt
gtgcaaggaagcgcgacttgtggaaagattgaggacgataaattaaatacggaggaacca
acgcaagtcacgcaggaaaaagcaaaaggcaataatgcgggattgagcgagtatggcaac
actcaaatgatgatggattttattgatcaatcgacgaaggttttacaggatcgcttagca
gccgcgttagaacaggaggcgataatcaccgcgaaaaggagacgagcacaatcggaagga
tcgaagcaatcaatgggtcacctgtaccgttataagcagattaattctaacgctcgtttg
tcgatgaggcagatcggcggtggcgcaccgcccataccgtgttcctatcaggagcttatc
gatcgacggatatcaccgagaatcctggagatcaccgctgcgaccgccgcgacatacaaa
ttccgttgctcggacttttatggggacgacgtggcacatagaaacgttcgcggaatagag
atggaggacagtgtacgtttaatcctggatgagaatggatatacgggaatctgggagttc
ctccgtgcatttcttgccagtccgggtgtagatccgaatctcgttcccgcacgctgggtc
gagaatcattaccgatggatcgtgtggaaattagcgtcgatggaccgaatgaagttcggt
tcggtcaaattacccagggcattaactccttcatacgttatggcacaattaaagtatcgg
tacgatcgagaaatcgaccggtctcagcgaccggcaataagacgcattttggaaaaggac
gacgttccgtctaagagaatgactttatgcgtgtcatctataatagaaaataataacgta
agtatggaaatagggaagagtccgcgtataggagtttcgaaatggagaatagaattaacc
gatggctggtacagtacaaatgcctctatcgatataggtatggtgaagaatatatcaact
ggtaaaataagagagggcacgaaattgctgttgtccggcgcagaattactcaactgcgac
caaggtttctatccactcgaggcaccggctgacgtgtgtttaaaattgcacacgaattca
accaggcgcgcacgatgggacacgaaattaggatacgcgccgcgttcggggccgataccc
atcaagttacgtaacgtgtgtccgagcggcggtttaatcggcaaaatgacgattgtcgtc
gctagaatgtatccgatgttatattacgagaaaactgcatccggagattcgattgtcaga
aacgctaaaagcgaagagaaagcgcaaaataaatacgagcagcaatgttggtccaagata
gagtcgttttatgctcaagcggaggactttcaaggaaaaggactttctggcgaaactgat
gatatggcaattcaactgagcgaagattacgaaaacttgtctacggaggaatccgtctct
aagaaacgacatgatgaattgctgcaagaattacgacagaaggaggaacgattcaaacag
aagatgcagtcaaaattgcgcgagagcttgccgggaccgcgacaggtttctcagttgctc
aaagttcgcgtgtgtgataaaaatgcgaatgccattctttcagtttggtcgcctagcgag
gagattgtcgatgctctgaaagaaggcgcgtgtgtttcgctctgcaacattgtggcttcc
ggaaagaggggtaccgaattgcaacttaccgcgcgtcggtctgcaatctttaaaccggga
aggatgcgcgatgcgtcttatcccgctagagtgtgcacatcgctagacgaaatagcaaat
tccgagttcgttccaccttatggagagtttgatacggttggtcttgtctgttcagtcggt
cctgctccttatggtatgagagactttgatgctgtacatttggcatattgtaaagcaggt
tcaaacgaatcttcgtacctttcaatattattttggcaaggaatacccagttacggttat
acagagattcttactgtcggatctatcgtagcttgcagcaatttagaatggcggagagcc
acttcatggaatatcccagcagcgtattgcacggatagaagtacttttacgctcaatcct
cgccgaaatcatttatacgaatccttcgaaaatctgcgaaaccgaatcacggatccaatt
aagtacgctgaaagctgcactttcgagcttaatgtggaattgcaaaagaagtcgacgcct
actcgctactcggcgggtaaaaatactccgattaaaatgtacagttcgacgtcaagcgcc
gacaaaaaattggttgactatacgtcgccgctggcgacgccgaaattgggaatggacaac
cgcttgagttttaacccatctaatccttcgattaagaaacgactcgaaaaactccaacaa
tacggcgaggcgccccaactatctcctattatactaagaaattcaaagaggatatgtttg
gattttcgatcacctatccttcccatttcagatataaactcgacaaaggagacaacgaaa
gctaatcaacccgaggaattaaagtccagtatctcggaaaagcattcatag
DBGET
integrated database retrieval system
