Atta colombica: 108694561
Help
Entry
108694561 CDS
T11098
Name
(RefSeq) transient receptor potential-gamma protein
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
acoc Atta colombica
Pathway
acoc04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
108694561
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acoc04040
]
108694561
Ion channels [BR:
acoc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108694561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
Ank_5
Ank_KRIT1
Holin_BhlA
TAFII55_N
Motif
Other DBs
NCBI-GeneID:
108694561
NCBI-ProteinID:
XP_018059613
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MASDTTRGRITAVAGGFLRGSAGQHVNFDPEAPPLPPTHVVQTTCLLERPEIDKKVKRHS
IHGMMEEENVVRPHQEMASLSLQEKKYLLAVERGDVASVRRMLQKAHEADININCVDPLG
RSALLMAIDNENLEMVELLIEHKVDTKDALLHAISEEFVEAVEVLLEHEETLHRNGEPHS
WEALPPDTATFTPDITPLILSAHRDNYEIIKILLDRGSILPMPHDVRCGCDECVTSRMED
SLRHSRSRINAYRALASPSLIALSSKDPILTAFELSWELRRLSFLEHEFKCEYQELRRQC
QDFATALLDHTRSSYELEVLLNHDPTGPAFEHGERMHLNRLKLAIKLRQKKFVAHPNVQQ
LLASIWYEGLPGFRRKNMFLQALEIVRIGVLFPFFSVAYIIAPHSMIGKTMRKPFIKFIC
HSASYFTFLFMLILASQRIESVIGNWMGHDVVEHEPAPTKRGAAPTIVEWFILAWVSGLI
WSEVKQLWDVGLEEYVNDMWNVIDFVTNSLYVATVALRVVAYYRVLKENKDQVPGSVIEL
QREQWDTWDPMLISEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVMDIMKFFFLY
VLVLFAFSCGLNQLLWYYADMEKKQCPSAMPYATNVSAINADPNACTVWRRFANLFETIQ
TLFWAVFGLVDLDSFELDGIKVFTRFWGMLMFGTYSVINIVVLLNLLIAMMNHSYQLISE
RADVEWKFARSKLWISYFEEGGTVPPPFNIIPTPKSVWYVAQWIYRKLCGHSRAAKKEHM
RTIRRKVKQASERDFRYQSIMRNLVRRYVTVEQRKAEGEGVTEDDVNEIKQDISAFRCEL
IEILKNSGMNTSTAASSGTDGSLKELSVGAGGKKNRQKERRLMKGFNIGPQPGGSSTLPP
VAEFIASLQQAQHENSHDLFGSTLSGIFGPGTTPKKSPHHTSTNSVPGLATGSRQSHSIR
SSSRKKRWGTLIEAAKAGRVSRLIGRSRSEDSVYSPASEDGGSRSEGSSDSKSSLEGASH
DVQSSQHPHHSHSHHAHHQAQHQEAHHMFTHGLGPALAALRKKRKKFSASRSSTPAMTSS
INTNPADSSTTSSVATVLAARISSKKQLQRASSVPTRGPELTPHSSIMTSRRHDVTQSQQ
PSLDVVEITISEHINAQQGVIVPLTPSTTEESVVASGSTSITAKRNGSATQLQRLPGIEP
ISGHDVSAGWL
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgacacaaccaggggtcgaatcaccgccgtcgcaggcggcttcttacgaggc
tccgccgggcagcacgtgaacttcgaccccgaggcgcctccactgccgccaacacatgtc
gtacagacgacttgtctgctcgaacgaccggaaattgacaagaaagtcaagagacacagc
atacacggcatgatggaggaagagaacgtcgtgagacctcatcaggaaatggccagtctg
tcgcttcaggaaaagaaatatcttctcgctgtcgagcgcggagatgtggcttccgttaga
agaatgctccaaaaagcccacgaggccgacattaacattaactgcgtggatcctctcgga
cgatcggctctcctcatggcaatcgataatgaaaatctagagatggtagagcttttaata
gagcacaaggtcgataccaaggatgcactccttcatgctatctccgaggaattcgttgaa
gcagtggaggtccttttagagcatgaggagacccttcacaggaatggcgagccgcacagc
tgggaggctctacctcctgatacagccacgttcacgcccgacatcacgccattgatcctg
tcggcccacagggacaactacgaaattataaaaattctcctagatcgtggatcgattttg
ccgatgccacacgatgttcgctgtggatgcgacgagtgcgtgacatcgagaatggaggat
tccctgaggcattcgaggagccgaataaacgcctatcgggcattggcgtcgccgtctttg
atagcattgtcgtctaaggatcctattctgactgcttttgaactctcttgggaacttcga
cgactttcgttcttggagcacgaattcaaatgcgaatatcaggaactccgaagacagtgc
caagacttcgcgactgcattgctggaccacactagaagttcctacgagcttgaagtcctg
ctgaatcatgatccaacgggaccagcttttgagcacggagagaggatgcatcttaatcgc
ttaaaattagctattaagctaagacaaaagaagttcgtagcgcatcctaacgtacagcag
ctactggcatcgatctggtacgagggtctgccggggtttcgaaggaagaacatgttcctc
caggcgctggagatcgtcaggatcggtgtcctttttccattcttcagcgtagcttacatt
attgcaccccatagcatgatcggcaaaaccatgaggaagccatttatcaaattcatctgt
cactctgcgtcatatttcacttttctattcatgttaatactggctagtcagcgaatagag
agcgtgatcggtaattggatgggacatgatgtcgtggagcacgaaccagcgccgacgaaa
agaggtgccgcaccaacgattgtggaatggtttatattggcctgggtgtcgggattgatc
tggtcggaggtgaaacaattgtgggatgtgggcctggaggaatacgtgaacgatatgtgg
aacgtgatcgacttcgtaacgaattcgctatacgtagccacagtggcgctcagagtcgta
gcttactacagggtgctaaaggagaataaggatcaggtgccgggttcggtgatcgaactc
cagcgtgagcagtgggacacttgggacccgatgctcatctctgagggcctcttctccgcc
gctaacatcttcagttcgctaaagctagtctacatattctccgtgaatcctcatctcggt
ccgctgcaagtttctttatcgaggatggtcatggacattatgaaattctttttcctctac
gtgttggtcctcttcgctttctcgtgcggtctcaatcaacttctctggtattatgccgac
atggagaaaaaacagtgtccctcagcaatgccatatgcgactaatgttagcgcaatcaat
gctgaccctaacgcgtgcactgtttggcgtagattcgcaaatctgtttgagacaatacaa
acgctcttctgggcagtttttggcctggtggatctcgacagctttgaactagatggcatc
aaggtattcaccagattctggggcatgttaatgtttggtacttactcagttattaacatc
gtcgtccttctgaatcttctgattgctatgatgaatcattcctatcaactaatctcggaa
cgcgctgacgtcgagtggaagttcgcgagaagcaagctctggatcagctattttgaggaa
ggcggtaccgttcctccaccgtttaacatcataccgaccccgaaaagcgtctggtacgtc
gcacaatggatatatcgaaagctctgtggacacagcagagcagccaaaaaggagcacatg
cgaacaatcaggcgaaaggtcaaacaagcttccgagcgggactttagatatcagagtatc
atgagaaatttggtgaggcgatatgtcacggtggagcaacgcaaagcggagggtgaaggt
gtcacagaggatgacgtaaacgagatcaaacaagacatcagtgcgtttcgttgcgagctc
attgagatactgaagaattccggcatgaacacctccactgcagcgagcagcggtactgac
ggtagccttaaagagctgtccgtaggtgcgggtggcaagaaaaaccgtcagaaggagcgg
cgcttaatgaagggtttcaacattgggccacagccgggcggaagcagcaccctaccgcct
gtagctgaattcatcgcgtcccttcagcaagcgcagcatgagaattctcatgacttattt
ggctcaactctgagtggcatatttggaccgggcacaactccgaagaagagcccacatcat
accagcactaatagcgtgcccggactagctacagggtcgcgacaaagccacagcatcaga
agtagctctcggaagaagcgttggggcactttgatcgaagctgcgaaagctggaagggtc
tccagactaatcggtagatctcgttccgaggactcggtatattcgccggcgtccgaggat
ggcggctcacgatccgaaggctcctcggactcaaagtcctcattggagggtgctagtcac
gatgtacaaagctctcagcatccccatcactctcattctcatcacgcacatcatcaagca
caacatcaagaggcgcatcacatgtttactcacggcctgggcccagctttggccgccctg
aggaagaagcgcaagaagttctccgcctcgaggtcatctacgcccgcgatgactagcagc
atcaacacgaatcccgcagactcaagtacgacatcttcggtcgccaccgtcctggcggcc
aggatctcctcgaagaagcagttgcaacgcgccagcagcgtgcccactcgaggtcctgaa
ttaacgccgcattcgtcaataatgacgtctcgacggcacgatgttacgcagagtcagcaa
cccagtctcgacgtcgttgaaatcaccatcagcgagcacattaacgcgcaacaaggtgtt
atcgttccactgacaccatcgaccaccgaagaaagcgtagtagcgagtggctcgacgtcg
atcacggcaaagcgaaacggatcggcgacacagctgcaacgtcttcccggcatcgagccg
atttccggccatgacgtgtccgccggctggctctga
DBGET
integrated database retrieval system
