Atta colombica: 108694658
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Entry
108694658 CDS
T11098
Name
(RefSeq) ATP-dependent helicase brm isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
acoc Atta colombica
Pathway
acoc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108694658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoc03021
]
108694658
03036 Chromosome and associated proteins [BR:
acoc03036
]
108694658
Transcription machinery [BR:
acoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108694658
Chromosome and associated proteins [BR:
acoc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
108694658
Chromatin remodeling factors
BAF complex
108694658
PBAF complex
108694658
GBAF(ncBAF) complex
108694658
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
ResIII
QLQ
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
108694658
NCBI-ProteinID:
XP_018059755
LinkDB
All DBs
Position
Unknown
AA seq
2058 aa
AA seq
DB search
MASPSPQSSPMPPPQAPSPMGPPQQAPSPSNAQGSPMGPPQHHPHSPTQGYQGGPPIPPG
GPPMSQPPQQPPPQQQSYPPHPQQMPPNMGPQNQSGPVVPTSQGPGGTMVPGQMGPNGPQ
SGSHMMQSPNQMGSNGPGQMGPGGQMGPGGPGQMGPGGPGQMGPGGPGQMGPGGPGQMGP
SHMVQGGGPPGGPHMNQTGPGQMGPGGPVPGSQMGSGGPQNSQMVPGGPGHMGGPPSHMN
TSGPPGPGHITPGGPPGHMAGAGPPVSGHMNASGPPGSGHMNASGPPGPGHMNTSGPPGS
GHMNSGPPISSHMNASGPPVSTHMNATGPGSHMGPGAPGQMPTSGPTVHSMGPNQMGPNG
PNHQNQMMANSQTQMGPGGPMGPIGPTGQIGPNGPGQMGHNGPSQMGPNGPQMGMGGPPG
QMSMNAPGGQIGPSNQMGPAGAGNQMGPNAGSQMGPTGPGQMGPGSGPVGQLGPNSLGQM
GPGSGPGSVPMTTSSGPVSIGPNGPTGICVMSGPGGQMTSSSGPGGQMGATGPGGSSGGQ
MGPGNGPGVQMNVGSGPGGQMVPGGIPGQMGSGSGQMGHGSSGPGQMGPGSGPGGQMGPG
SGPGQMGPGGQIPSSGPGQMMQGGPGAQMGPNASSNQMGPGGPNSQMGLCGPNNQISHTS
ASGQMGPNGPNVQPPTTQIGPGSQNQGQVPNSTAPLGSGAPVNQMSQTGSGQIGPTGPTG
PPGSGQENLNALQKAIDSMEEKGLQEDPRYSQLLALRARQGSGMGDKQAFNSQQLQQLRA
QIMAYRLLARNQAVPQQVALAAQGGAPPPPGMSQRPIDPSQGPVTTSGPQIPGPNVIGPT
GAPRPGCQTPQQQQQQPQSGAKANRVTSVGKPAGLDPLLILQERENRVAARISLRMEQLS
NLPTNMPEDLRIQAQIELRMLRVLNFQRQLRSEIIACTRKDTTLETAVNVKAYKRTKRQG
LREARATEKLEKQQKLEAERKRRQKHQEFLSSVLQHGKDFKEFHRNNVAKLARLNKAVLN
YHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTE
MVKQHKIEQKRKQVEEQKRKKKKKKLQDGENAEDGGANDDTRIGVIETATGRTLTGDEAP
LMSQLSAFLEAHPGWEPIESDSEEDEDDDEEENGENESKDKSMGDSEEEKVKKTIHKAKV
EDDEYKTEEQTYYSIAHTVHEVVTEQASIMVNGKLKEYQIKGLEWLVSLFNNNLNGILAD
EMGLGKTIQTIALVTYLMEKKKVNGPFLIIVPLSTLSNWVLEFEKWAPSVVVVSYKGSPA
GRRTIQSQMRATKFNVLLTTYEYVIKDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQVLNT
HYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEE
ETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGVLLT
DGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQAIEEKYCEHVGTQGSGVITGPDLYRA
SGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLRLDGTTKAEDRGDL
LKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE
VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQSILHQDDADD
EEENEVPDDETVNQMIARTEGEFEIFQKLDLERRREEAKLGPNRKSRLLEEAELPDWLVK
DDDEVERWTYEEDEDRFLGRGSRQRKEVDYTDSLTEKEWLKAIDDDGAEYEEEEEDDKKK
KKTRKRKKKGEEDDEPMPKKRRGAGSLVDPKMKRAMKKLITLVVNYTDSSDGRLLSEPFM
KLPSRRELPDYYEIIKKPLTINKLLQKIEEGKYADLDELEKDFMQLCKNAQIYNEEASLI
HEDSIVLQSVFTNARQRLEEEGNNSDGDDKDGEDGSDADSSVRMKIKLKGRKGEGRGGRR
KRVTKKYISDDDDDADDN
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtccttcgccacaatcttcgcctatgccaccaccacaagcacctagtcccatg
ggacctccacaacaggcaccatccccatctaatgcacaaggtagtccaatgggaccgccg
cagcatcatcctcatagtccaacacagggttatcaaggtggtccacccataccaccaggt
ggaccacccatgtcgcaaccaccacaacaaccaccaccccaacagcagagttatccaccc
catccacagcaaatgccacctaatatgggtccacagaatcaaagcggcccagttgtacct
acctctcaaggtcctggaggaacaatggtacctggacaaatgggtccaaatggaccacaa
agtggatctcatatgatgcaaagtcccaatcagatgggttctaacggacccggacagatg
ggtcctggtggacaaatgggacccggtggacccggtcaaatgggtcctggaggacctgga
caaatgggaccaggaggcccaggacaaatgggtcctggaggtcctggacaaatgggtcca
tcacatatggtgcaaggtggtggtcctcctggtggacctcatatgaatcagactggacca
gggcaaatgggtcctggcggacctgttccaggatctcaaatgggttctggaggccctcaa
aattctcaaatggttcccggtgggcctggccatatgggtggtcctccaagtcacatgaat
accagcggtccaccaggaccaggccatataactcctggtggtcctcccggacatatggct
ggcgcaggacctccagtatcaggacacatgaacgctagtggaccacccggatcaggacat
atgaatgcgagtggaccacctggaccaggtcacatgaacacaagtggacctcctggatca
ggtcatatgaatagcggaccaccgatttcaagtcacatgaacgcgagtggtccaccagta
tctacacatatgaatgcgaccggtccaggaagtcatatgggtcctggcgctcctggtcaa
atgcccacaagtggtcctacagtgcacagtatgggtccgaatcaaatgggcccaaatggc
ccgaatcaccagaaccagatgatggcgaacagtcaaacacaaatggggcctgggggaccg
atgggtcctattgggccaacaggacaaattggaccaaatgggcctggacaaatgggtcat
aatgggccgtcacagatgggtccaaatggacctcaaatgggcatgggcggtccacctgga
caaatgagtatgaatgcgccaggcggacaaattggccctagtaatcaaatgggacctgca
ggggcgggtaatcaaatgggaccaaacgcaggtagtcaaatgggacctaccggtccaggt
caaatgggaccaggaagcggtcccgtaggccaattaggaccgaatagtcttggacaaatg
ggtcctggaagtggtccaggtagcgtaccaatgacaacaagtagtggacctgtttctata
ggacctaatggacctactggaatatgtgtaatgagtggccctggtggacaaatgacttct
agcagcggtcccggaggacaaatgggtgcaacaggtcctggaggcagctctggaggacaa
atgggaccaggaaacggtcctggagtgcaaatgaatgtcggcagtggacctggcggtcaa
atggtacccggaggcatacccggacaaatgggatcaggcagtggacaaatgggacatggt
agtagtggacctggtcaaatgggaccaggaagcggacctggtggacaaatggggccaggt
agtggtcctggtcaaatgggaccaggcggacaaattccatcaagtggtccaggacagatg
atgcaaggaggtccaggtgctcaaatgggcccgaatgcttcgagtaatcaaatgggtcct
ggtggtccgaatagtcaaatgggactgtgtggtccaaataatcaaattagtcatacaagt
gcgagtgggcaaatggggcctaatggaccaaatgttcagcctcctactactcaaataggt
cctggcagtcaaaatcagggtcaagttcccaatagcacagcaccattaggatccggtgct
ccagtaaatcaaatgagtcaaactggaagtggacaaattggtcctactggacctacagga
ccacccggatcaggacaagagaatctgaatgcgcttcaaaaagcaattgattctatggaa
gagaaaggattacaagaagatccgcgatattctcaattgttagccttaagagctcgtcaa
ggcagtggtatgggtgataagcaagctttcaattcgcaacaattgcaacaattacgagct
cagataatggcatacagattgctagcaagaaaccaggctgtacctcaacaggttgcacta
gctgctcagggtggcgcgcctcctcctccagggatgagtcaacgccccatagatccgtct
caaggccctgttacaacatctgggccacaaataccaggtccaaatgttattggtcccaca
ggtgctcctagaccaggttgtcaaacgccgcaacaacagcaacagcaacctcaatctggc
gctaaggctaacagagtgacaagtgtaggaaaacctgcaggattagatccattgttaata
ttgcaagaacgagaaaacagagttgcagcccgaatatcgcttagaatggagcaacttagc
aatctaccaacaaatatgccagaagatcttcgtatacaagctcagatcgaattgcgcatg
ctaagagtactaaacttccagagacaattaagatcagagattatagcatgtactcgaaaa
gataccactttagaaactgcagtgaacgtgaaagcttataaacgtacaaaacggcaaggg
ttgcgtgaagctagagctaccgaaaaattagaaaaacaacagaaattagaagcagaacgt
aaacgaagacagaaacatcaagaatttcttagttctgtgttacaacatggcaaagacttt
aaagaatttcatcgcaataatgttgcaaaattggctaggcttaacaaagcagtgcttaac
tatcacgcgaatgctgaacgggagcagaagaaagaacaagaacgcattgagaaagagcgt
atgcgtcgtcttatggcggaagacgaagagggttacagaaaattaattgatcaaaagaag
gataaacgtttagcattcttgttatctcaaaccgatgagtatatcagtaatcttacagaa
atggttaaacaacataaaatagaacaaaagagaaagcaagtcgaagaacaaaagcgtaag
aagaaaaagaagaaattacaagatggtgagaatgctgaagatggcggagctaatgatgat
actcgtattggtgtaatagaaacagccactggtcgcacattaactggcgatgaagcacca
ttaatgagtcaattatcagcatttttagaagctcatcccggatgggagccaattgaatca
gatagtgaggaggatgaggacgatgacgaagaggagaatggagaaaatgagagcaaagat
aaatcaatgggtgattctgaagaagaaaaagtaaagaaaacaatacataaagcgaaagtg
gaagatgacgagtataaaacagaagaacaaacatactatagtattgctcatacggttcat
gaggttgtcactgaacaagcaagtatcatggtgaatggaaaattgaaagaatatcaaatt
aagggtctggagtggttagtgtcactgtttaacaataatctaaatggtattttggcagac
gaaatgggtctcggtaaaacaattcagactattgctttagtaacatatcttatggaaaag
aagaaagtcaacggtccatttctcattatcgttcctttatcaacattatcaaattgggtt
ctggaatttgaaaaatgggcaccaagtgttgttgtagtgtcgtacaaaggttctccagct
ggcagaagaacgatacaatctcagatgcgagctacaaaatttaatgttcttttaacaact
tacgaatatgttataaaagataaaggtgtgttagccaaattgcagtggaaatatatgatt
attgatgaaggacacaggatgaaaaatcatcattgcaaacttacccaagtgctaaataca
cattatttggctcctcatcgactattgttaactggtacaccattgcaaaataaattgcca
gaactgtgggctcttttgaatttcttgttaccttcaatctttaaatcctgcagtacattc
gagcagtggttcaatgctcctttcgcaactactggcgaaaaggtggagctgaacgaagaa
gaaactattttgattattcgtcgtttgcacaaagtattgcgacctttcttattgagacgc
ttgaaaaaagaagtagaatcgcaattacctgataaagtggaatatattattaaatgcgat
atgtctggcctacagaaagttctttataagcatatgcaaagtaaaggtgtactactgaca
gacggatcggaaaaaggaaagcaaggaaaaggcggtgccaaagctcttatgaatacaatc
gtacaattgagaaaactatgcaatcatccatttatgtttcaagctatagaagagaaatac
tgcgaacacgtcggcacgcaaggttccggtgttattactgggcccgatctatatcgtgca
tctggaaaatttgaacttctcgatcgtattcttcctaaattgaaggctacaaatcacaga
gtattactgttttgccaaatgactcaattaatgacaattatggaagattatttaagttgg
cgaggatttatgtatttacgattggatggtacaacgaaagcagaagatagaggagattta
ttaaagaaatttaacgatcccggttcagaatatttccttttcttgctatccacacgtgct
ggtggtcttggtttaaatctccaagctgctgatacagttatcatttttgattctgattgg
aatcctcaccaagatttgcaagctcaagacagagcacacagaatcggacagaagaacgaa
gtgcgtgtactccgattaatgactgttaattctgttgaagaacggatattagcggcagct
aggtataaattaaatatggatgagaaagttattcaagctggtatgttcgatcagaagtcc
actggctctgagcgacagcaatttcttcagagtattttacaccaagacgatgctgacgat
gaagaagaaaacgaagtacccgacgatgaaactgtaaatcaaatgattgctaggacagaa
ggtgaattcgaaatattccagaaattagatttagaacggcgacgtgaggaggccaaatta
ggtccaaatcgcaaatcacgactgctagaagaagctgagttgcccgattggttggttaag
gatgacgatgaagtggaaagatggacctacgaagaggatgaagatagattccttggaaga
ggttcaaggcaacgtaaagaagttgattatacagatagtttaaccgaaaaagaatggttg
aaggcaattgatgatgatggcgctgagtatgaagaggaagaagaagatgataaaaagaaa
aagaagacacggaaacgtaagaagaaaggcgaggaagatgacgagcctatgccgaagaaa
cgaagaggtgccggatctttggtcgatccgaaaatgaaacgggctatgaaaaaattaatc
acattagttgttaattataccgacagtagcgatggccgattattgagtgaaccttttatg
aaattaccttcacgaagagaattaccggactactatgagattattaagaaacctttaact
attaataagttattgcagaaaatcgaagagggcaaatatgctgatttagacgagcttgag
aaagatttcatgcaactttgtaaaaacgctcaaatttataacgaagaagcatcactaatt
cacgaagactcgatagtgttacaatccgtttttacaaatgcgcgtcagcgtcttgaagag
gaaggtaataattccgatggagatgataaagatggcgaagacggctcggatgcggattct
agtgtaagaatgaaaattaaactaaaaggaagaaaaggtgaaggaagaggcggtcgtaga
aagagagttactaaaaaatatatatctgacgatgatgatgatgctgatgataattaa
DBGET
integrated database retrieval system
