KEGG   Atta colombica: 108694982
Entry
108694982         CDS       T11098                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
acoc  Atta colombica
Pathway
acoc03030  DNA replication
acoc03410  Base excision repair
acoc03420  Nucleotide excision repair
acoc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acoc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108694982
   03410 Base excision repair
    108694982
   03420 Nucleotide excision repair
    108694982
   03430 Mismatch repair
    108694982
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acoc03032]
    108694982
   03036 Chromosome and associated proteins [BR:acoc03036]
    108694982
   03400 DNA repair and recombination proteins [BR:acoc03400]
    108694982
DNA replication proteins [BR:acoc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    108694982
  DNA Replication Termination Factors
   ELG1-RFC complex
    108694982
Chromosome and associated proteins [BR:acoc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    108694982
DNA repair and recombination proteins [BR:acoc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     108694982
  Check point factors
   HRAD17(Rad24)-RFC complex
    108694982
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 AAA_16 RuvB_N AAA_14 AAA_11 DUF815 ResIII AAA_5 AAA_19 AAA_24 AAA_30 AAA_7 PhoH DEAD ATPase_2 AAA_assoc_2 AAA_13 RCF1-5-like_lid TniB TIP49 bpMoxR MCM FtsK_SpoIIIE AAA_3 Mg_chelatase nSTAND3 MTR4_beta-barrel AAA_25
Other DBs
NCBI-GeneID: 108694982
NCBI-ProteinID: XP_018060170
LinkDB
Position
Unknown
AA seq 328 aa
MTSSNEQQVNLPWVEKYRPKSLDELISHETIIKTINKYIDENQLPHLLLYGPPGTGKTST
ILACARKLYTSAQFNSMVLELNASDDRGIGIVRGQILSFASTGTMYKSAFKLIILDEADA
MTIDAQNALRRIIEKYTDNVRFCIICNYLSKIIPALQSRCTRFRFLPLAAEQIIPRLNHV
IEAENLKVTEDGKQALITLSGGDMRKVISVLQSTWFAYGAVNEENVYNCVGHPLPRDITS
IVNWLLNESYDTCYKKIQELKLNKGLALQDILTEVHSYVIKIDFPDQLFTDLLCKMAEIE
KRLASGCRDNIQLNSLISAFYSVRDIET
NT seq 987 nt   +upstreamnt  +downstreamnt
atgacatccagcaatgaacaacaagtaaatttaccatgggtcgaaaaatatcgtcctaaa
agcttggatgaacttatttcccatgagacgataataaagacgataaacaagtacattgat
gagaatcaactgccgcatcttcttctctatggaccacctgggacaggaaagactagtact
atactggcgtgtgctcgtaaactctatacttcagctcagttcaattcaatggtattagaa
ttaaatgcttccgatgatagaggtataggcattgtgcgaggccaaatcctgagttttgct
agtacaggcactatgtataagtctgcgtttaaattaattatcttggatgaagctgatgct
atgacgatcgatgctcagaatgcacttagaagaattattgaaaaatacacggataatgtg
cgtttctgtattatatgcaactacctcagcaagattattccagctctgcagtctcgttgc
accaggtttagattcttacctcttgcagcggaacaaataataccaagactgaatcacgtc
attgaagcagagaatttaaaagttacggaagacggcaagcaagcattgataacgttaagt
ggtggtgatatgagaaaagtaataagcgtacttcaaagtacatggtttgcttatggtgct
gtgaacgaagagaatgtgtataattgtgttggacatccgttaccaagagatataactagt
attgtaaactggttgttaaacgagtcttatgacacatgctacaaaaagattcaagaactg
aaattgaacaagggtcttgcgctgcaagatatattaacagaagttcactcatatgtaatt
aaaattgattttcctgatcagttatttactgatttattatgcaaaatggcagagatagaa
aaaagattggcttctggatgtcgcgacaacattcaattaaattctcttatatctgcattc
tacagtgttcgcgatattgaaacgtaa

DBGET integrated database retrieval system