Atta colombica: 108695068
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Entry
108695068 CDS
T11098
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
acoc Atta colombica
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoc03041
]
108695068
Spliceosome [BR:
acoc03041
]
Common components
Common spliceosomal components
General mRNP proteins
108695068
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
PRP38_assoc
Nup35_RRM_2
RRM_7
RRM_10
DUF8400
RSRP
Motif
Other DBs
NCBI-GeneID:
108695068
NCBI-ProteinID:
XP_018060306
UniProt:
A0A195BZ42
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MRGVSESSPTRVMAEDLDVEAMLEAPYKKGEQDSSSKDKSSKENGSSRKSSGKSKHRSRS
RSRSRDRDRRDKDRRDRERDRDRDRDRDRDRDRDRDRRRRSRSRERRDRERDRDSDRDRD
RRDRDRDRDRRRKRSLTPLTLPRARPPFGKGHSPLGINDELTPEERDARTVFCMQLSQRI
RARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIV
VQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIM
DPETGRSKGYGFLTFRNADDAKKALEQLNGFELAGRPMKVGNVTERTDLIQGPSLLDTDE
LDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANALNMAPVMAQPQPPPQAAPPIATQCF
MLSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVA
AVNSLHGRWFAGRVITAAYVPVVNYHSLFPDAMTALQLLVPSAPRRGM
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcgtttcagagagctctccgactcgcgtaatggcggaggatttggatgtcgag
gcaatgctggaggcgccgtacaagaaaggggagcaggactcctcttccaaagacaagtcc
tccaaggagaatgggtctagtcgcaaatcatctgggaagagcaaacatcgttcgcgttca
cgttcacgatccagagatcgcgatcgccgagacaaagatcgacgggatcgcgagagagac
agagaccgggatcgcgatcgggacagagatcgcgatcgcgatcgtgaccgtcggcgcaga
tccagatcgcgcgaaagacgggatcgggaaagggatcgtgacagcgatcgggacagggac
aggcgagacagagatcgggatagagacagaaggaggaagagatcgctgacaccgctaacc
ttacctagagcccgaccgccatttggtaaaggtcacagcccattaggaataaacgatgaa
ttgacaccagaggaacgagatgctcggactgtcttttgtatgcagttaagtcaacgaatt
cgtgcgcgtgatttagaagaattcttttcaagcgttggcaaggtacaagatgtcagactt
atcacatgcaacaaaactcgaagattcaaaggtattgcctatgtggaattcaaagatcca
gaaagtgtgacacttgctcttggtttgtctggtcaaaagcttcttggagtgcctattgta
gtacagcatacacaggctgagaagaatcgtatgggtaattcaatgccaaacctaatgcct
aagggacaaacaggacccatgcgattatatgtaggatccttgcattttaatatcacagaa
gatatgcttcgtgggatcttcgaaccatttggaaagattgacaacatacagttgattatg
gatcctgaaacagggcgcagcaagggttacggtttcttgactttcagaaatgcagacgac
gcaaaaaaagcattggaacaactaaatggattcgagctcgctggtagacctatgaaagtt
gggaatgtaacggaacgaactgatctgattcaaggaccttctctacttgatactgatgag
ttagatcgtagtggaattgacctcggagcaactggaagattacaactgatgttcaaattg
gcggaaggtaccggtctggaaattcctcccgctgcagcaaacgctttaaatatggcacca
gtaatggcgcagccgcaaccaccacctcaagccgcgcctcccattgcgacacagtgtttc
atgttatccaacatgttcgatccgcaaaatgagacgaatcctaactgggcaaaagagatc
cgcgatgatgtgattgaggaatgtaacaagcacggtggcgttctgcacgtatatgtggac
caagcatcaccacaaggcaatgtttacgtaaagtgcccgtcaatcgcgactgccgtggcg
gctgtgaactcgctgcatggtcgatggtttgccggccgcgttataaccgcagcttatgtg
ccggtagtgaattatcattcattatttcccgatgcaatgaccgcgttacaattattggtg
ccgagcgcgccgcgaagaggaatgtga
DBGET
integrated database retrieval system
