Atta colombica: 108695098
Help
Entry
108695098 CDS
T11098
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
acoc Atta colombica
Pathway
acoc03008
Ribosome biogenesis in eukaryotes
acoc03013
Nucleocytoplasmic transport
acoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108695098
03015 mRNA surveillance pathway
108695098
03008 Ribosome biogenesis in eukaryotes
108695098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoc03019
]
108695098
03009 Ribosome biogenesis [BR:
acoc03009
]
108695098
Messenger RNA biogenesis [BR:
acoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108695098
mRNA cycle factors
Stress granule specific factors
108695098
Ribosome biogenesis [BR:
acoc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108695098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
NTF2
LRR_8
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
108695098
NCBI-ProteinID:
XP_018060345
UniProt:
A0A195BRQ2
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MPKKSNKSWGSRNNRGNEDKDYFGHDDRVFLKGRQGRDRRLHGPIKHRVSFKTHTPNNMS
RNLAFANLDDDIPMTSNNNTRQVILNPSNRERSDRSWRNVSRGRNSPMPNRNFKGGQSGS
RRPPPLRESSWYRVTIPYGQKYEKDFIINTLLNYITPDVFVPILYKTSTTDASFYIDDYK
TAVALQSCDYKITMSDGFKLQVKVKPGFPVYDIDDKLKERLKQAMGKRYVQDTNALNLSK
FHRDPDLCSDYFCALFHPIMLITVLDIVAEHIPNLEALNLEGNKLQNIERLSILTKKFSK
LKILFIGDNKIRDIYQLDAIKDLKLDELKLTGNPVCNKYKSRQNDYISDVRRRFPRLLRL
DGTELPRPIVFDVVDEAAKTPPSQRMFVTDAKAQEIASQFLQQYFTIFDSENRQPLLDAY
NEHALFSMTINTSNNNKLNGYFLENRNLFRINDTVRRQKFLKQGRLPVVSFISEMPHTRH
LLNTFTMDLSLVTQTIMFITITGYFQQLDNKEELIRYFNRTFIIVPEGEGYCIRNEQLHI
SQPSEVQLKELHQQLNQLNTQQTQPETQTLSSTEAKPVPTELDDEVKKQMTLMLSQQTNM
NLEWSLKCLQETQWIYDNAIAAFQEFFKRGQIPPQAFAK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaagtcaaacaagtcgtggggcagtcgcaacaatcgaggaaatgaggataag
gattattttggtcatgatgaccgggttttcctaaaaggaagacaaggaagagatagaaga
cttcatggtccaattaagcatcgtgtatcattcaaaactcatacacctaacaacatgtct
cgtaatttggcatttgctaatttggatgacgacattccgatgacttctaataacaatacg
agacaagtaatactcaatccgagtaatagagaacgatctgatagaagttggcgaaatgtt
tctcgtggaagaaacagtcctatgccaaatagaaatttcaagggaggtcagtcaggttct
aggcgacctcctcctttgagagaatccagttggtatagagttactataccatatggccaa
aaatatgaaaaggattttattataaatacccttttgaattatataacgcccgatgtattt
gtacctatattatacaagacatcgacaactgacgcaagtttctacatagacgattacaag
acggcagttgcattgcaaagctgtgattataagattacaatgagtgatggatttaaactg
caagtgaaagtgaaaccaggatttccagtttatgatattgatgataaattaaaagaaaga
ttgaagcaagcaatggggaagagatatgtacaagataccaatgctttgaatttatccaag
tttcatcgtgatcctgatctttgctctgactacttttgcgcattgtttcatcctatcatg
ttgataactgtgttggatattgtggcagagcacatcccgaatttagaagccttgaacttg
gaaggaaataagttgcaaaatattgagagactcagtatattaaccaagaagttctcaaaa
ttgaaaattctctttatcggcgataacaagatcagagacatttatcaattagatgctatt
aaggatctaaaactggacgaattgaagttaaccggaaatcctgtctgtaacaagtataaa
tctcgacaaaatgactatattagtgatgttcgaaggagattcccaaggttactacgccta
gatggcacagaattaccgcgaccaattgtcttcgatgtagtcgatgaagctgccaagact
cctccatcgcaaagaatgttcgtcactgatgcaaaagcacaagaaattgctagtcaattt
ttacaacaatatttcacgatatttgatagtgaaaatcgtcaacctctactggatgcatat
aatgaacatgcattatttagcatgacaataaatacttctaataataacaagttaaatgga
tactttttggagaatcgaaacctattcagaatcaatgatacggttagaagacagaaattt
ttgaaacagggtagattacctgtagtatctttcatatcagaaatgccgcatacaaggcat
ttgctgaatacttttaccatggacctttcccttgttacacaaacaattatgtttattacg
ataacgggctatttccaacaactcgataacaaggaagagctcattcgctacttcaatcgc
accttcataattgttccggaaggtgaaggatattgtattcgaaatgagcagttgcatatt
agtcaaccatctgaggtgcaattgaaggaattgcaccagcaactgaaccagttgaatact
cagcaaactcagccagaaacgcagacgctgagttccacagaagcaaaacctgtaccaacg
gaactcgatgacgaagtaaagaagcagatgacattaatgttaagtcagcagacaaatatg
aatttggaatggagcttgaagtgcttacaagaaacgcagtggatctacgacaatgcaatc
gctgccttccaagagtttttcaaacgtggacagataccaccacaagcgtttgcaaaataa
DBGET
integrated database retrieval system
