KEGG   Atta colombica: 108695136
Entry
108695136         CDS       T11098                                 
Name
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
acoc  Atta colombica
Pathway
acoc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:acoc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108695136
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acoc03400]
    108695136
Enzymes [BR:acoc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     108695136
DNA repair and recombination proteins [BR:acoc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     108695136
SSDB
Other DBs
NCBI-GeneID: 108695136
NCBI-ProteinID: XP_018060389
LinkDB
Position
Unknown
AA seq 972 aa
MPTDDEDQQQQGEEKPFAVERAKTGRAKCKKCKCPIEKDEIRIAKYVASFFSDGKLMPAW
HHVICLFEAFAKQRASTKRIEDPAEDIKGWEQLSDDDKKIIQDKLEEFERSFPTKTPKKA
ATPRKAAASNNSSGETAKKTSDQKRVATDDKEKDKQKVDKQGKSKVPSKDDSFREFRRVC
SNVADVDAYTDKTAIIKRMFTKGSLGDGFKGDIVLWCKLLLPGAVKRIYNLQSKQLIKLF
ARLLLQDEDAMLEHLEQGDVAETISVFFENSAAASPCAASVLTIQDVDLFLKNLSRLTKE
EEQIQHFRSILDKCTANDLKMIIRLIKHDLRINAGPKHMWDIQDNELNKEYESKALIFYY
IIGFTIPLHAEACTSVEMAMRKCPNGMLSEVKYDGERVQVHKSGNDFRYFSRSLKPVLPH
KVNLFKDYIAQAFPDGDDLILDSEVLMVDNETGQPLPFGTLGIHKKAEFKNANVCLFVFD
CLYYNGEILIDKSMLERRNILKDRMTEIPNRITLSEVHEVHDPQDLAGRIVHVLKLGLEG
LVLKDIDSKYEPGKRHWLKVKKDYLCGGAMADSADLVVLGAWYGTGNKGGMLSVFLMGCY
DEKHDKWLTVTKVHTGHDDATLTMLQDQLDMVKIGKDVERLPSWLHAKKPMVPDFVAKDP
KKQPVWEITGAEFTNQGVHTADGISIRFPRVTRIRHDKDWSTATTLDELRVLFKRKPESV
DFGRLLDTLTDVKTSLRKKSFDPTKNTSPKKIESSRTNFWDEPSTSSRAKKELPKDIKEE
FEEIPLQERTLKRRKGNDCDKESFDKVRLEKKKLKREIKGKTENSSSTKLKKEEKSNSRM
EGSFDSLFDASSIDSNGEVKKFSNVLQEVRASLAPDFDTSRKKDTRRKLKTLGATIVTLA
NGHDSTATHVIHTRAEIPSSAILGEYAVFPRTVRHVNVSWLEETAAQSRRQDEVRHAVQL
AGDYCDCPCTHR
NT seq 2919 nt   +upstreamnt  +downstreamnt
atgccgactgatgacgaggatcaacagcagcaaggggaagagaaaccgttcgctgtggag
cgcgcgaaaaccggccgtgcgaaatgcaaaaagtgcaaatgtccgattgaaaaggacgag
atacgtatcgccaagtatgtggcgagtttcttctcggacggcaaactgatgccagcctgg
caccacgtcatttgcctgttcgaggcgttcgcgaaacaacgcgccagcacaaagaggatc
gaggatcccgcggaggatatcaaaggctgggagcaattgtccgacgatgacaagaagatt
atccaggacaagttggaggaatttgaaagatcctttccgactaaaacaccgaagaaagct
gcaacgccacgtaaagcggctgcctctaataattcttcgggagaaacagcgaagaagact
tcagatcagaagagggtcgcaacagatgataaagaaaaagataagcagaaggttgataag
cagggaaagagcaaagtcccgtcgaaggatgactcctttcgcgaatttcggcgcgtgtgc
agcaacgtcgctgacgtcgacgcctacactgacaaaaccgcgattattaagaggatgttc
acgaaaggatcactcggagacggttttaagggtgacatcgtgctctggtgtaaactgttg
ctgcctggcgccgtgaagagaatttacaatctacagagcaaacaactgataaagttattc
gcgcggttgctgctccaggacgaggacgcgatgctggagcatttggaacaaggcgacgta
gccgagacgatcagtgtgttctttgaaaatagcgctgccgcatcgccttgcgccgcaagc
gtattgactatccaagatgttgatctctttttgaaaaacctatcgcgtttgaccaaggag
gaggagcagatccagcattttcgatctatcctcgataaatgtaccgccaatgatctgaag
atgatcatacgtctgattaagcatgatctgaggattaacgccggaccgaaacatatgtgg
gatatacaagacaacgaactaaataaagaatacgaaagcaaagcacttatattttactac
ataataggttttactattccattacacgcagaggcgtgcacgtccgtggaaatggcgatg
cgaaagtgtccgaacggaatgttgtcggaggtcaagtacgacggcgagcgtgtgcaggtg
cacaaaagcggaaacgactttcgatacttcagcagatctctcaagccagtcctgccgcac
aaggtgaatctcttcaaagattatatagcgcaggcgtttcctgatggtgacgatttaatt
ctcgattccgaagttctcatggtcgacaatgagactggacaacctttgcctttcggcacc
ttaggaattcacaaaaaagccgaattcaaaaacgccaatgtatgcctttttgtcttcgac
tgtttgtattacaatggcgaaatacttatagacaaatctatgctggagcgcaggaacatt
ttgaaggacagaatgacggagataccgaatagaataacgttgtcggaggttcacgaagtg
catgatccgcaagatttagcgggaaggattgtccatgtattgaaactgggtcttgaaggt
ttggtcctgaaagacatcgatagcaaatacgagccgggaaagaggcattggttgaaggta
aaaaaggattatctgtgcggtggtgcgatggctgatagcgcagatctcgtcgtgcttggt
gcatggtacggcacaggcaacaaaggtggcatgctatcggttttcttaatgggctgctat
gacgagaagcatgacaagtggttaactgttactaaagtacacacagggcacgatgatgct
accctgacgatgctgcaggatcagctggacatggtgaaaatcgggaaggatgtggagaga
ctaccgagctggttgcatgctaagaaacccatggtaccggatttcgtggcgaaggatcct
aagaagcagccggtatgggagataacgggcgccgagtttacgaaccaaggggtgcacacc
gcggacggcatcagcatccgatttccgcgtgtcacacggattcgccacgacaaggactgg
tcgacagccaccaccctggacgagttgcgtgttctcttcaaaaggaagcccgagtctgtt
gatttcggccgtttgctcgatacgttaactgatgtaaagacttctctgaggaagaaatcg
ttcgatcccacaaagaacacatcgccgaagaagatcgagagttcgagaacgaacttctgg
gacgagccatcgacgagctctagggctaagaaggagctaccgaaagacatcaaggaggaa
ttcgaggaaataccgcttcaggaaagaactctcaaaagacgaaaagggaatgactgcgac
aaagaatcgttcgataaagtccggttggaaaagaagaaattgaaacgtgagattaaggga
aaaacagagaattcctcgtcaacaaaattaaaaaaagaagaaaaatcgaattcgaggatg
gaaggatctttcgattccttgtttgatgcgagttctattgattcgaacggtgaagttaaa
aaattcagtaatgtgctgcaagaggtgcgagcgagtctcgcgcctgatttcgacacgagc
agaaagaaggacacgcgaaggaagcttaaaacactcggcgccacgatagttacgctggcg
aacggacacgattcgacggcaacccacgtcatccacacccgcgcggaaattccgtcctcg
gctatcctcggggagtacgcggtcttcccgcggaccgtcaggcacgtgaacgtctcttgg
ctggaggaaaccgccgcgcagtccaggaggcaggatgaagtccgacacgcggtccaactg
gccggcgattattgtgattgcccatgcacgcatcgttaa

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