Aphelocoma coerulescens (scrub jay): 138098107 Help Entry 138098107         CDS       T10543                                  Symbol DCHS1 Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism acoe  Aphelocoma coerulescens (scrub jay) Brite KEGG Orthology (KO) [BR:acoe00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:acoe04515]     138098107 (DCHS1) Cell adhesion molecules [BR:acoe04515]  Cadherins   Cadherin related    138098107 (DCHS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th RET_CLD1 Cadherin_4 PepSY CADH_Y-type_LIR Motif Other DBs NCBI-GeneID:  138098107 NCBI-ProteinID:  XP_068861818 LinkDB All DBs Position 1:246996..287945 Genome browser AA seq 3266 aa AA seqDB search MEQMKRSTMLLLELLILGGLRAGMGSAVLGTLDLQIDEEQPAGTIIGDISAGLPPETSAY MYFISAQEGSGVSTDLGIDENTGIIKTARVLDRETRDRYSFIAVTPEGITVEVNIQVNDI NDHAPAFPKQHSTFQIPEHTPIGSRFPLDPAFDADSGLLNTQGYMIKGGNVGQAFRLETR RGPNGVLYLDLVVSNVLDRENRSSYSLLLEAYDGGSPPRSTQMTLDVSIQDINDNAPSFN QSRYHTLISENLKPGSSILQVFASDADEGDNGDVIYEINRRQSDPDQYFTIDARTGVIKL NKGLDYEVRKVHELVVQARDKAVHPEVTTAFVTIHVRDYNDNQPTMTIIFLSEDGSPQVS EGAQPGQYVARISVSDPDYGEYSNVNVTLEGGDGKFALTTKDNIIYLICVDQLLDREERD SYDLRVTATDSGTPPLRAESAFVLQVMDVNDNPPLFDQQEYKQSIPEVVYPGSFVLQVTA RDKDQGPNGEVQYSILHGRDTHSSWFTIDPATGIITTAAPLDYEKDPQPQFTVLATDRGT PALSSSAVVHVALQDVNDNEPVFRSNFYNVSLKENTPVGTCFLQVTATDADSGAFGSLSY SIGSGIGSVVPTQFSIDKHSGQLCTVQPLDRDEGTSAYDFTITAVDGGGLNSMVYVKVFL EDTNDNRPVFYPLEYAASISTQSMPGTAVLRVTAHDKDEGLNGRVTYRIVLGNSPPLFSL NKDTGIISLSWSLSGKANTLVQLVISAQDGGGLHAQPNARVNISIVEGTVSPPVFEQAQY FFTVPEDVPQGASVGAVQAQNPPGHADDIFYSISSGDPHGYFSIDSASGQLRTSLPLDHE SQSVLILDVQARSGSPPAYSNTRVKISVSDVNDNVPAFPTPSDSILLPEATEPGTTVYTV QAEDRDSGANGQVTFELVSGGEGTFVVERASGAVRLLGALQYEASSAYSLAIMARDSGIP QLSSTFTLLVHVQAEDDNGPIFDTLTYRVEVQEGVPVSTRFLQVRALAHDVESTALTYHL RADGDAASFGIMPESGWLYVKSALDRETRDLYVLTVLASVGGTGAAADTRKTGTSTVRIS VTDENDNSPRLSEERYFFTVPENQVPGSSVGRVMASDRDAGQNSRLTYRLLQHDPNFLIH TQTGEVSTKHSLDREQQSSFQLLVIVQDGGAPPRSATGTIYVTVLDENDNAPAFLHVGSG QELPVQVLEEKPSGLLVASLQAKDPDEGENGTIIYSLIGAWAERFTLHVATGELRTATVL RRTERAEYIFTVTASDRGTVPRSTSAIVRVQVLPSSRVLPRPDATVLTLHPLEGVKPGSV IGSVAPLDAPAQGQLTYMVVGGGGDGTFVVDSMTGEIYAARELDYEAGARHVLQVSAEDM QHGYPSSRLVLVQIHVQDCNDQAPTFPEDPITIVVPESAQAGSSIFTFQALDGDGVGPNS QVRYALLHLEPPGAPFQLDSRSGQLTLRQGLDREAAASFLLVVEATDQARNVSQRRSAAV TARVFVTDENDNVPVFLSPATVSIMEDQPTGFVALHVVAQDSDLGENGRVSYSLRAGNSD GRFHLNPNTGALSIVRALNREEVAQHNLTVVATDHGFPRLSATQLLSVLVLDVNDEAPAF EKPEYEAHIMENLPAGSPVLQVLATDRDLGANGQVSYGGLSGGPFSIHPQTGLIVTTRPL DREEQEQHVLTVYARDAGLPPSLTKATVRVTVGDENDHAPHLESESCSVEVPENQSRVAL YTLRATDPDGGENGRLEYRVAGGDPGQDFSLDPVSGVLSTAHALDREQIASYSLIVVVQD HGSPPRSATMSVTVQVLDLNDNAPGFAQAAYTVEVPEDLPVGDLVLQLVAEDPDEGTNGQ VSYYLGNESLGMFQVEPQSGHIRSAQALDRERQPTYSFLAMAVDSAPWEPRSTAVRITVV VRDVNDHVPAFLHSPLTVNLSRHTPLKQVVATMRAEDRDAGANASILYRFAMPSSAFAIN SYTGDIQLLQPLGTLSQRQRTLFVLATDLGQPALSSTGVVVIHVQEEPYQGLRFPRSTSD VALAENATPGTEVASVQAMHMGGSSGHITYSIISGNERNTFLIQPSSGAISVQDSSSLDF EASPRLRLVIQAETTASFGFMAINLNLQDVNDNLPRFQLQNYVAFIWESQSYDSPVIQVL ADDLDQGANGQVTYAINQSLPMPGLYHIDPQTGTITTAAILDREIWSQTRLVVTAMDRGT PPLMGSATLTVVVMDVNDNSPTIPVPWEIRVPENTLLGTQIAQLTGNDVDSGPALSYTLL LEGDAADTFGVLRYGGHVALTGPLDHEQRSRYTLTLRASDTRHETEANLTVLVEDVNDNV PTFTQVFYQVLLPEHTPAGSVILTVSATDPDSGSNGDITFHLAVPSPDVAIDPSNGTLFT TRQVEFNVSQPTLDLVVEARDHGSPSLSSWATVQLQFLDINDHSPRFQEPCYNASVPEDL HPGTTVLTLEAGDADLSRENAGFDYTIVSGNGGNAFQVESRVAWAGGQLRTQGALVLVES LDFESIPVYNLTVAASDRGLPQRSATVPVLITVQDVNDNPPVFTRAEYRAAVSEAALPGT ELLRVAAHDADSGPRGCIHYTISSGDQHGLFQLHESTGALSLARPLDREVQALHTLVVRA TDTPGGHFALVPVAIEVKDINDNKPYFPVEVLSTSIRENLPPGTLVTTLRAIDADTGTFG ELRYMVLEQAVGDPTIGDGRDAFAVNGSSGELRSRLTFDYERAKAFQLLVRATDAGNASA TVTVRVLVTGEDEYDPIFLSSSFNFEVPEGARKGQSIGRVLATDEDEGADGVVLYTLAKP SPYFAINQTTGFIYLRVDSQPQAGAGRAKREPREMSLEVQARSPLPASRVASAQVTIDIT HTSFGLAADLNLLLVAVAASLGVVVVLAAVAIVLALVRSRQRRGHKKAEGEGALAHAQSG SLQKLGREEPALPGAEHIYHQALPGYGTEPAGPYTRGGSLDPSHSSGRGSAEAAEDDEIR MINEYPRVASITASMQEHIAARGPDSGIQQDADQLSDISCEPAALESTQWFKSKKGSGLL LPGPPLQLYHEDGGGSAFLGVRCGLSVSSQPQDYAFPEDGKPSVEGSLTAIVASDEELRG SYNWDYLLNWCPQFQPLASVFTEIARLKDESSLRKPFPAKPKAEPKPRIDPPPLITSVAH PGAKSVPPKPPPGRTFPHPSSLRRSPISHEGSISSSAMSPSFSPSLSPLAARSPVVSPFG ISQGPSTSTISAEHSLEPPEEAELRI NT seq 9801 nt NT seq  +upstreamnt  +downstreamnt atggagcaaatgaagaggtcaacaatgcttctgctggagctgcttattcttgggggcctg agagcagggatgggctctgctgtcctgggcaccctggatctacaaatagatgaggagcag ccagctggcaccatcattggggacatcagtgctggcctaccccctgaaactagtgcctac atgtatttcatctcagcacaggagggcagtggcgtctccactgacttggggatagatgag aatactgggatcatcaaaacagctcgtgtcctggaccgggagactcgagaccgctacagc ttcattgctgtcaccccagagggcatcacggtagaagtgaacatccaagtgaatgacatc aatgatcatgccccagcctttcccaaacagcacagcacctttcagatcccagagcacaca cccattggcagcaggtttcccttggacccagcctttgatgctgacagtggcctcctgaac acacaaggctatatgattaagggagggaacgtggggcaggccttccgcctggaaacgcgt cgaggacccaatggggtcctatatttggacctggtggtcagcaacgttctggatcgggag aaccgttcgtcatactcgctgctgttggaagcctacgatggtggttctcctccccggagc acccagatgacactggatgtgtccattcaggacatcaatgacaatgctcccagcttcaac cagagccgctatcatacactcatttcagagaatctgaaacctggcagcagcatcctgcag gtctttgcctctgacgcagatgaaggtgacaatggggatgtgatttatgagatcaaccga cggcagagtgatcctgaccagtacttcaccattgatgcccggactggggtcatcaagctc aacaagggtctggactatgaagtgaggaaggtgcatgagctggtggtgcaagcaagggat aaggctgtccatcctgaggtcaccacagcctttgtcactatccatgtgcgtgactacaat gacaaccagcccacaatgactatcatctttctgagtgaggatggctccccacaggtctca gagggagctcagcctggacagtatgtggcacgcatttctgtttccgatccagactatgga gagtactccaatgtcaatgtcacactggagggaggagatggcaagtttgccctcactacc aaggacaacatcatctatctgatctgtgtggaccaacttctggatcgggaagaaagagac tcctatgatctgcgggtgacagctactgactcaggaacacccccgctccgggcagaatca gcctttgtgctgcaggtgatggatgttaatgacaatcccccgctcttcgaccagcaggag tacaagcagagcatccctgaggtggtgtacccaggcagctttgtcctgcaggtgacagct cgtgacaaggaccagggtcccaacggagaggtgcagtacagcatcctgcatggccgtgac acccactctagctggtttaccattgaccctgccactggcatcatcaccactgctgcccca ctggattatgagaaggaccctcagcctcagttcactgtgctggccacagaccggggaacc cctgccctctcttcctcagctgtggtgcatgtggccttgcaggatgtcaacgacaatgag ccggtgttcaggagtaacttctacaatgtgtccctgaaggagaacacccctgttgggacc tgcttcttgcaagtgacagccacagacgcggacagtggcgcatttggctccctttcctac tccattggctctggcattggcagtgttgtccccacacagttcagcattgacaagcactca gggcagctatgcacggtgcagcccctggaccgcgacgagggcacatctgcctacgacttc accatcactgctgtggatgggggcggcctgaactccatggtgtacgtgaaggtgttcctg gaggacacaaatgacaaccggccagtgttttacccgctggagtacgctgccagcatcagc acacagagcatgccagggacagctgtgctgcgtgtcactgcccatgacaaggacgagggg ctgaatgggagagtgacataccgcatcgtcctgggaaactcacccccgctcttctccctg aacaaggacacaggtatcatctctctgtcatggtctctgagtggcaaagccaacaccttg gtgcagctggtgatctctgctcaggatggggggggcctgcacgcacagccaaatgcccgg gtaaacatcagcatcgtggagggcacagtctcaccccctgtctttgagcaagctcagtac ttcttcaccgtgcccgaggacgtgccacagggtgccagtgtgggggctgtccaggcccag aacccaccaggtcatgctgatgacatcttctattccatctcctcgggggatcctcatggc tacttctccatcgactcggcctcagggcagctccgcaccagcctgcctctggatcacgag tcccagtcagttctcatcctggatgtccaggcccggagtggttcaccccccgcctacagc aacacacgtgtgaagatctctgtatcagatgtgaatgacaacgtgccggcattcccaact ccctctgactccatcttgctgccagaggccacagaacctgggactacagtctacactgtg caggccgaggaccgtgacagtggtgccaacggacaggtgacctttgagctggtgtcgggg ggtgagggcacctttgttgtggagcgtgcctcaggggcagtgcggctccttggggccctg cagtatgaggccagctcagcctacagcctggccataatggcccgggacagtggcattccc cagctcagctccaccttcacgctgctggtgcacgtgcaagccgaggacgacaacggaccc atttttgacactctcacctaccgtgtggaggtgcaggagggtgttcctgtctccacccgc ttccttcaggtgagggccctggcacatgatgtggaatccacagcccttacctaccacctg cgtgcagatggggacgctgccagcttcggcatcatgcctgagagtggctggctatacgtc aagagtgccttggaccgggagacacgggacttgtatgtgctgacggtgctggcctcggtg ggaggcactggggctgcggcggacacacggaaaactggcaccagcaccgtgcggatcagc gtcactgatgagaatgacaacagccctcggctgagcgaggagcggtacttcttcaccgtg cctgagaatcaggttcctggcagcagtgtgggaagggtgatggcaagcgaccgggacgca gggcagaacagccggctcacctaccgcctgctccagcatgatcccaacttccttatccac acacagacaggagaggtcagcaccaagcacagcttggatcgggagcagcagtccagcttc cagctcctggtgattgtgcaggatgggggagcaccgccccgcagtgccaccggaaccatc tatgtcacggtgctggatgagaatgacaatgctcctgctttcctccatgtcggcagtggt caggagctacctgtgcaggtgctggaagagaagccatcaggactcctggtcgcctccctg caggccaaggaccccgacgaaggggagaatgggaccatcatctactcactgataggagcc tgggcagagcgtttcactctgcacgtggctaccggagagctgcggacagccacagttctg cgccggactgagcgtgccgagtacatcttcactgtgacagccagtgaccgtggcaccgtg cctcgcagcacatcagccatcgttcgtgtccaggtgttgccatcctcccgtgtgctgcca cggcctgatgccaccgtgttgaccctgcatcctctcgagggggtcaagccagggtctgtg attggttcagtggcccctctggatgcccctgcacaaggacaactgacctacatggtggta ggaggtggtggggatggcacctttgtggttgatagtatgacaggggagatttatgctgcc cgtgagctggactatgaagctggggcacggcacgtgctccaggtgagtgccgaggacatg cagcatggctatccctccagccggttggtgctggtccagatccacgtgcaggactgcaat gaccaggcacccaccttccccgaagaccccattaccattgtggtgcctgagagtgcccag gctggctcctccatcttcaccttccaggcgctggatggggatggagtgggccccaacagt caggtgcgctatgctctgctgcacctggagccgcccggagcccccttccagctcgacagc cgctcagggcagctgaccctgcgccagggcctcgaccgggaggctgctgcctccttcctg ctggtagtggaggccacagaccaggcccgcaatgtcagccagcgccgctcagctgccgtc acagcccgtgtgtttgtgaccgatgagaacgacaacgtgcccgtcttcctctccccggct accgtcagcatcatggaggaccagcccacaggctttgtggcactgcatgtggtggcccag gacagcgacttgggagagaacggacgtgtgagctactccttgcgagcaggcaacagtgat ggccgtttccacctcaaccccaacactggtgcactgtccattgtgcgggccctgaaccgg gaggaggtggcacagcacaacctgacagtggtggccacagaccatggcttcccacgcctc tccgccacacagctgctgtccgtgctggtgctggacgtcaatgatgaggctcctgccttt gagaaacccgagtatgaagcccacatcatggagaacctgccagctggcagcccagtgctg caggtgctggccacggaccgggatctgggtgccaacggacaagtgtcctatgggggtctc tctggggggccattctccatccacccacagacggggctcattgtcaccacgcgtcccctg gaccgggaggagcaggagcagcatgtgctgacagtctacgctcgggacgccggcctgcca cccagcctcaccaaggccacggtgcgggtcaccgtgggggacgagaatgaccatgcacca cacctggagagcgagtcctgctccgtggaggttcctgagaaccagagtcgtgtggcactc tacaccctgcgggccactgatcctgatggtggagagaacggacgcttggaataccgggtg gcaggtggagaccctgggcaggatttcagcctagaccctgtctccggtgtcctctccact gcacacgcccttgaccgagagcaaattgcttcctacagcctcattgtagtggtgcaggac cacggctcccccccacgcagtgccactatgtcagtgactgtgcaggtgttggacctcaat gacaacgcacctggttttgctcaggccgcctacacggtggaggtgccagaggacttgcca gtcggtgacctggtgctgcagctggtggccgaagacccagatgagggcaccaatgggcag gtctcctattacctgggcaatgagtctctgggcatgttccaggtggagccacagagtggg cacatccggagtgctcaggcactggaccgggagcgccagcccacctacagcttcctggcc atggcggtggactcggcaccgtgggagcccaggagcacggctgtgcgtatcactgtcgtg gtgcgagatgtcaacgaccacgttccggccttcctgcacagcccactcactgtcaacctg tctcgccacactccgctcaagcaggtggtggccaccatgagggctgaggacagggatgca ggtgcaaatgcctccatcctgtaccgctttgccatgcccagctctgcctttgcaatcaac tcctacacgggggacattcagctgctgcagccccttggcacactcagccagcgccagcgg acactctttgtgctggccaccgacctggggcagccagcgctctcctccacaggggtagtg gtgatccatgtgcaggaggagccttaccaggggctgcgctttccccgcagcaccagtgat gtggccctggccgaaaatgccaccccaggcactgaggtggcgagtgttcaggccatgcac atggggggctcctcggggcacatcacctacagcatcatcagtggcaacgagaggaacacc ttcctgatccagcccagctcaggtgccatctcagtgcaggactccagtagcctggatttc gaggccagcccccggctgcgcctggtgatccaggcagagaccacggcttcctttggcttt atggccataaacctcaacctccaggatgtgaacgacaacctgccccgcttccagctgcag aactatgtggcgttcatctgggagtcacagagctatgactcacctgtcatccaggtactg gcagatgacctggaccagggagcaaatgggcaggtgacttatgccatcaaccagtccctg ccaatgccgggcttgtaccacattgaccctcagactggcaccattaccactgctgccatc ctggacagagagatctggtcccagacccgcttggtggtgacagcgatggaccgaggaaca ccaccgctcatgggctcggccacgctgaccgtggtggtgatggatgtcaatgacaacagc cctactatcccggtcccctgggagattcgcgtccctgagaacacactgctgggcacccag atagcccagctgactgggaacgatgtggactcgggccctgcgctctcctacacgctgctg ctggagggggacgcagcagacacctttggggtgctgcgctatggtggccatgttgccctg acggggccactggaccacgaacaacgcagccgctacaccctcacactgcgcgcctctgac acacgccatgagactgaggccaacctcaccgtccttgtggaggatgtgaacgacaatgtg cccaccttcacccaggttttctatcaggtgctgctgccagagcacacacctgctggcagt gtcatcctcactgtgagcgcaactgaccccgactcagggagcaatggggacatcactttc cacctggctgtgcccagccctgatgttgccatcgaccccagcaatgggaccctcttcacc acccggcaggtggagttcaatgtcagccagcccaccctggacctggtggtggaggcccgc gaccacggctctcccagcctctcatcctgggccacagtgcaactccagttcctggatatt aatgaccacagtccccgcttccaggagccatgctacaatgccagtgttcccgaggacctg cacccaggcaccactgtgctaacgctggaggcaggtgacgccgacctctcccgggagaat gctggctttgactacaccattgtcagtgggaatggcggcaacgccttccaggtggagagc cgggtggcctgggctgggggacagctccgcacgcagggagccctggtgcttgtggagtcc ctggactttgagtccatcccggtgtacaacttgaccgtggcagcctcagaccggggcctg ccgcaacgcagtgccaccgtgcctgtgctcatcactgtgcaggacgtcaatgacaacccg cccgtgttcacccgggccgagtaccgtgcagcagtgagcgaggctgcgctgcctggcact gagctgctgcgcgtggcagcccacgatgccgactcagggccacgtggctgcattcactat accatcagctcaggtgaccagcatgggctgttccagctgcatgagagcacaggggccctg agcctggcacggccactggatcgggaggtccaggcgctgcacacactggtggtgcgggcc acggacacaccaggtgggcactttgcgctggtccccgtggccattgaggtgaaggacatc aacgacaataagccatacttcccagtggaggtgctgagcaccagcatccgggagaacttg ccacctggcacactggtcaccacgctgcgtgccatcgatgccgacaccggcacctttggg gagctgcggtacatggtgctggagcaggcagtgggggaccctaccatcggggatggccgg gacgcctttgctgtcaatgggagctctggggagctgcgctcccgcctcacctttgactat gagcgggccaaagccttccagctcctggttcgggccaccgacgctggcaacgcctcggcc actgtgactgtgcgggtgctggtgacaggggaagatgagtatgaccccatcttcctgagc tcctccttcaacttcgaggtgcctgagggcgcacgcaaagggcagagcattgggcgggtg ctggccacggatgaggatgagggggctgacggtgttgtgctgtataccctggcaaagcca tcaccatactttgccatcaaccagaccacaggcttcatctacctgcgtgtagacagccag ccccaagccggggctgggcgtgccaagagggagccacgggagatgagcctggaggtgcag gcacgtagccccctgcctgcttcccgtgtggcctctgcgcaggtcaccattgacatcaca cacacctccttcggcctggcagccgacctcaacctactgctggtggctgtggctgcctcg ttgggcgtcgtggtggtgctggccgccgtggccatcgtgctggcactggtgcgctcccga cagcgccggggccacaagaaggcagagggggagggggcactggcccatgcacagagtggg tccttgcagaagctgggccgtgaggagccagcactgcctggggctgagcacatctaccac caggcactgccagggtatgggaccgagccggcagggccctacacacggggcggctcactg gacccctcgcattccagcggccgtggctctgctgaagccgctgaggatgacgagatacgg atgatcaatgagtacccacgcgtggctagcatcacagcctccatgcaggagcacatcgct gcgcgcggccctgactctggcatccagcaggatgccgaccagctttccgacatctcctgt gagccagctgcgctggagagcacccagtggttcaagagcaagaagggctctgggctgctg ctgccagggccacccctgcagctgtaccatgaggatggcgggggcagtgccttcctgggc gtccgctgcggcctcagtgtctcctcacagccccaggactacgccttcccagaggatggc aagccctccgtggagggctcgctcaccgccattgtggccagcgacgaggagctccgtggc agctacaactgggattacctgctgaactggtgtcctcagttccagccactggccagtgtc ttcacggagatcgcccgcctcaaggatgagagctccctgcgcaaacccttcccagccaag cccaaagcagagcccaagccccgcatcgacccccctcccctcatcacctcggtggcccat ccaggtgccaagtctgtgccccccaagccaccaccaggcaggaccttcccgcacccatcc tccctgcgccgctcgcccatcagccacgagggttccatttcgtcctccgccatgtcgccc agcttctccccatcgctgtcccctctggccgcccgctcccccgtggtctcgcccttcggc atctcgcaggggccatccacctccaccatcagcgctgagcactcgctggagccccctgag gaggccgagctcaggatttag

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