Aphelocoma coerulescens (scrub jay): 138098139
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Entry
138098139 CDS
T10543
Symbol
SFPQ
Name
(RefSeq) splicing factor, proline- and glutamine-rich
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acoe01009
]
138098139 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoe03021
]
138098139 (SFPQ)
03041 Spliceosome [BR:
acoe03041
]
138098139 (SFPQ)
Protein phosphatases and associated proteins [BR:
acoe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138098139 (SFPQ)
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
138098139 (SFPQ)
Spliceosome [BR:
acoe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
138098139 (SFPQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
138098139
NCBI-ProteinID:
XP_068850519
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All DBs
Position
23:5124306..5138277
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AA seq
600 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGPNHDFRSPPPGMGMGQNRGPMAGGPQGPGGPPG
GGPKPEPPKPPTSTPAPPSSSSSASATTAGPTGSQAGAPPSSALPAGQQPQQQPPVSAPS
SSPSGPQPQSKPSPSPTPAGGPKKGQGQSPGGGPKGPGGPQQGPHKGGPGHRGGPGGEPR
GRGQQHQGQQSLGALQGSGERSEKLSDEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADI
TDEDFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRFAT
HAAALSVRNLSPYVSNELLEEAFSQFGPVERAVVIVDDRGRSTGKGIVEFASKPAARKAF
ERCTEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQPGSFEF
EYSQRWKSLDEMEKQQREQVAKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEELRR
MEELHNQEMQKRKEIQLRQEEERRRREEEMMIRQREMEEQMRRQREENYSRMGYMDPRER
DMRMGGAATMNMGDPYASAAQKFPPLGGGGGIGYEANPGVGQAAMSGSMMGSDMVKMKAE
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggatcgcttccgtagccgtggcggcggtggcggcggctttcaccggcgtggc
ggcggcggcggccgcggcggccccaaccacgatttccgctcgccgccgcccggcatgggc
atgggacagaaccgcggcccgatggcgggcggcccgcaaggcccaggcggtccgccggga
ggaggcccgaagcccgaaccgccgaagccgcctacgtccacccctgctccgccttcttca
tcctcttcagcgtccgccaccacggcgggacccaccggcagccaggcgggagcgcctcca
tcctctgcgcttcccgcggggcagcagccacagcagcagccgccggtttcggctccctcc
tcgtctccctccggcccacagccgcaatcgaagcccagccccagccccacaccggccggc
ggccctaagaaaggacaaggacagtctcccggcggcggccccaaggggccgggtggcccg
cagcaggggccgcacaagggcgggccggggcaccgcggcgggccgggcggggagccgcgg
ggccgtgggcagcagcaccagggccagcagagcctcggggcactgcagggctcgggagaa
aggagcgagaagctgtcggacgagggttttaaagcgaacctctctctcctgaggcgaccc
ggggagaagacgtacacacagcgctgccggttgtttgttgggaatttgcctgctgatatc
acagacgaagactttaaaagactgtttgccaaatatggggagccaggagaggtttttatt
aacaaggggaaaggctttggattcattaaactggaatctagagctcttgcagaaatcgca
aaggcagagttggacgatacccccatgaggggccggcagctccgcgttcgctttgccact
cacgccgctgccctgtcggtgcggaacctctccccctatgtatccaacgagttgctcgag
gaagctttttcccagtttggtccggtggaaagagctgttgtgattgtagatgatcgaggt
agatcaacaggaaaaggcattgttgagtttgcatcaaagccagctgcaaggaaagcgttt
gaacggtgtactgagggggtgtttttgttgacaaccactcccaggccagttattgtggag
ccattggaacaactggatgatgaagatggtcttccagaaaagcttgctcagaagaatccg
atgtatcaaaaggaaagagagactcctccccgttttgctcagcctggcagttttgaattt
gaatattcccagagatggaaatctttagatgaaatggaaaagcagcagagagagcaggtg
gcaaaaaacatgaaagatgccaaggacaaacttgaaagtgagatggaagatgcttatcat
gagcatcaggcaaacctcctgcgtcaagaccttatgaggcgccaggaggagctgaggcgt
atggaagaactccataatcaggaaatgcagaaacgcaaggaaattcagctgaggcaggag
gaggagcgtcgccggcgggaggaggagatgatgatccgccagcgggagatggaagagcag
atgagaagacagagggaagagaattatagtagaatgggttacatggatccaagagagcga
gacatgagaatgggtggtgctgccacaatgaacatgggagatccttatgcttcagcagcc
cagaaattcccacctctgggaggtggtggcggcataggttatgaagctaatccaggagtt
ggccaagcagccatgagtggttctatgatgggaagtgacatggtgaagatgaaagctgag
tga
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