Aphelocoma coerulescens (scrub jay): 138098407
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Entry
138098407 CDS
T10543
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04510
Focal adhesion
acoe04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138098407 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138098407 (LAMB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
138098407
NCBI-ProteinID:
XP_068851062
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All DBs
Position
1A:complement(15503791..15546188)
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AA seq
1785 aa
AA seq
DB search
MGRLPLYLCCCLALWPAAAQEPEYSYGCAEGSCYPATGDLLIGRAARLSASSTCGLSQPE
PYCIVSHLQEDKKCFICDSKDPFHDTLNPDSHLIENVVTTFAPNRLKLWWQSENGLENVT
IQLNLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGQTWQVYRYFAYDCESSFPGISTGPM
KKVDDIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRVKFVKLHT
LGDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVEGFDEEVEGMVHGHCMCRH
NTKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNGHSSQCHFDMAVYMTTGNTSGGVC
DDCQHNTMGRNCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGGICDRYTDFSTGLI
AGQCRCKLFVEGERCDLCKEGFYGLSADDPAGCQSCACNPLGTHPGGNPCDSETGNCYCK
RLVTGKQCNQCLPEHWGLSNDMDGCRPCDCDPGGALNNNCSGESGQCECRPHMFGRQCNQ
VEPGYYFISLDHYIYEAEEANLGPGVNIIERQYTPDRTPSWTGIGFVRVPEGAYLEFYID
NIPYSMEYDVLIRYEPQLPDQWEKAVISVSRPGKIPTGSRCGNTVPDDDNQVVSLSPGSR
YVVLPRPVCFEKGLNYTIRLELPQYSSVDTETENPYTLIDSLVLMPYCKSLDIFTVGGSG
EDVVMNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCDPQGSLS
SVCDPNGGQCQCRPNVVGRQCDRCAPGTFGFGPSGCRPCECHVRGSYNAFCDVETGQCHC
FPGVYGRQCDRCLPSFWGFPSCQPCHCNGHADDCNPYTGECLSCRDHTAGHNCERCQAGY
YGDPILGSGDHCRPCPCPDGPESGRQFASGCYQDPVTLQVVCVCSVGYIGSRCDECASGF
FGSPDEVGGACQPCQCNNNIDTTDPEACDKRSGACVKCLYHTEGENCHLCRQGYYGSALQ
QDCRKCVCNYLGTVREDCEGSESCRCEAATGQCRCLPNVVGQTCDRCGPHTWRLASGTGC
EQCDCDPARSLGPACNEFTGQCHCMPGFGGRTCRECQELFWGDPAVECLACDCNPHGIQT
PQCDRATGQCICSEGVEGLHCDKCSRGYSGFFPDCMPCHQCFALWDVIISELANRTQQFL
DRANTLKITGVTGPYQQTLNTLEEKLTEIKTIVAQNPAAEPLKNIGNLFEEAEKLTADVT
VKIADIEENLSALAAKSNSTDTDLSALETDAKSLDHVVKELAEQLEFIKISDVRGALDSI
TKYFQMSLEAEERVNASTVHPDSAVELSAQTRQEVEDLINEKEAQFRAKQEEQSRLLDEL
AGKLQSLDLSEVAEKTCGTAPGASCAESECGGLNCRTDEGKKKCGGPSCDGLVTVAHNAW
QKAMDFDRDILSALAEVEQLSRMVSEAKQRADEAKQNAQAVLLKTNATKEQVDRSNEDLR
NLIKQIRDFLMQDSADLDSIEAVANEVLNMEMPSTPQQLQALTEDIRERVESLSDVEVIL
QQSAGDIARAEMLLEEAKKASKGATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDIK
GTQDLLTSIESENAASAETLNNATLRLFELEKSVEDLRQKAATNSENVGNIEDKITSAKQ
NAEEVKKVLNSELSGKYRTVEELIAKKTEESAEARRKAGVLQDEAKALLAQANSKLQLLK
DLENMYENNQKVLEDKAKQLVELEETVRSLLQTISQKVAVYSTCL
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcctcccgctgtacctctgctgctgcctcgcgctgtggcccgcggcggcacag
gaacccgagtacagctatggctgcgccgagggcagctgctaccccgccaccggcgacctg
ctcatcggccgcgctgcccgcctctccgcctcgtccacctgcggcctcagccagcccgag
ccctactgcatcgtcagccacctccaggaggacaaaaaatgtttcatatgtgactcgaag
gatcccttccacgatactctcaatcccgacagtcacctcattgaaaatgtcgtcaccacg
ttcgctccaaatcgcctgaagctctggtggcagtcagaaaatggtttggaaaacgtgact
atccagctgaatctggaagctgagtttcatttcactcatctcattatgaccttcaagaca
ttccgtcctgctgcaatgttgattgaaagatcgtctgactttggacagacttggcaagtt
tacaggtattttgcatatgactgtgagagctcatttcctgggatttcaactggacccatg
aagaaagtggatgatataatttgtgattcccgatactctgacattgaaccttcaacagag
ggagaggtaatatatcgtgttctagatcctgcttttcgaattgaagatccatacagtcca
aggattcagaacctgttaaagatcacaaatctgagagtgaaattcgtcaagctgcacacg
ctgggagataacctcttggactccaggatggagatccgagagaagtactactatgccatc
tacgacatggtggttcgcgggaactgtttctgctacggacacgccagtgagtgtgcacca
gtggagggcttcgatgaggaagtggaaggaatggttcatggtcactgcatgtgcagacat
aataccaaaggattaaattgtgagcagtgtttggatttctaccatgacttaccctggcgt
cccgctgaaggccgcaacagtaacgcatgcaaaaagtgcaactgcaatggccactccagc
cagtgccactttgacatggctgtgtacatgacaacggggaacaccagcgggggcgtgtgt
gacgactgccagcacaacaccatgggacgcaactgtgagcagtgcaagcccttctacttc
cagcacccagagagagatctacgggaccctgacgtctgtgagccttgcaactgtgaccca
gctggctcccagaatggtgggatctgcgatcgctacactgatttctccactggcctcatt
gccggacagtgccgttgtaaattatttgtcgagggggagcgttgtgacctctgcaaagaa
ggtttctatggcctgagtgccgatgacccagcgggttgtcagtcttgtgcgtgtaatcct
ctgggtacccaccctggggggaatccttgtgattcggagacaggaaactgctattgtaag
cgtctggtgacaggaaagcagtgcaatcaatgtctgcctgagcactggggcctgagcaat
gacatggatggatgtcggccgtgcgactgcgacccgggcggagcgctgaacaacaactgc
tcaggtgaatctggccaatgtgaatgccggccccacatgtttggacgtcaatgcaaccag
gtggagcctggctattacttcatttcgcttgatcattacatctatgaggcggaggaagcc
aacttgggtcctggagtgaacataatagagcgccagtacacgccagaccgtacaccgtca
tggacaggcataggctttgtgagggtccctgagggggcatacctggaattctacattgac
aacatcccctactccatggaatatgatgttctgatccgctatgagccgcagttgcctgat
cagtgggaaaaagctgtgatcagtgtctcacgcccaggcaagatccccacaggtagccgg
tgtggcaacacagttcctgatgatgataatcaggtggtctcactgtcacctggatccaga
tatgttgttctcccacggcctgtgtgctttgagaaggggctgaattacaccatccgcttg
gagctgccccagtactcctcggtggacacggagacagagaacccatacacactcattgac
tctcttgttctcatgccatactgcaaatcactggacatattcacagtgggaggctcaggt
gaagacgtggtcatgaacagtgcttgggaaactttccaaagataccggtgtttggaaaac
agcaggagtgttgtgaaaactcccatgacagatgtctgcaagaacataatattcagcatt
tctgcactactgcatgagactgctttatcatgccagtgtgacccccagggctctctgagt
tcagtgtgcgaccccaatggaggacagtgccagtgtcgtcccaatgttgttggaagacag
tgtgacagatgcgcccctggcacctttgggtttgggccaagtggatgccgaccgtgcgag
tgccacgtccgaggctcttacaacgccttctgcgacgtggagacgggccagtgccactgc
ttccccggggtgtatgggcggcagtgcgaccgctgcctgcccagcttctggggcttcccc
agctgccagccctgccactgcaatggccacgctgacgactgcaacccctacactggggag
tgcctgagctgccgtgaccacacagccggacacaactgcgagagatgccaggctggctac
tacggagaccccatcctgggatcaggtgaccattgccgcccctgcccttgccctgatggc
cccgagagtggacgccagtttgccagtggctgttatcaggatccagttacactgcaagtc
gtgtgtgtctgtagcgtgggatacataggcagtcgatgtgatgaatgtgcgtctggcttc
tttgggagccccgatgaggttggtggcgcctgccagccgtgccagtgcaacaacaacatc
gacaccactgacccagaggcctgtgacaagaggagcggagcgtgcgtgaagtgcctgtat
cacaccgagggtgaaaactgccacctctgcaggcagggctactacgggagcgccctgcag
caggactgcagaaagtgcgtctgcaactacctgggcactgtccgggaggactgcgagggc
tcggagagctgccggtgtgaggcggccacggggcagtgccggtgcctcccaaacgtggtg
gggcagacctgtgaccgctgtggcccgcacacgtggcggctggccagcggcaccggctgc
gagcagtgcgactgcgaccccgcgcgctccctcggcccagcctgcaacgagttcacaggg
cagtgccactgcatgccaggctttggaggccggacctgccgggagtgccaggaactcttc
tggggcgacccagcggtggagtgcttagcatgcgattgcaaccctcatggcatccagacc
ccacagtgcgaccgtgccactgggcagtgcatctgcagtgaaggggtggaagggctgcac
tgtgacaagtgttcccggggctactcgggcttcttccccgactgcatgccgtgccaccag
tgctttgccctctgggacgtgatcatcagcgagctggctaaccggacccagcagttcttg
gacagggctaataccctcaaaatcactggagtcactggcccataccagcagacgctcaac
acgctggaggagaagctcacggaaattaaaaccatcgtcgctcaaaatccagcagctgag
cccctgaagaacattgggaatctcttcgaggaagcagaaaagctgacagcagatgttaca
gttaagatagctgacatagaagaaaacttatcagccttagcagcaaagagcaatagcaca
gacactgacctgagcgcgctggagacagatgccaaaagtcttgaccacgttgtgaaagaa
cttgcagagcagctagagttcatcaagatctctgatgttcggggagccttggatagtatc
accaagtatttccagatgtccctggaggcagaggagagggtcaatgcctccactgttcat
cccgatagcgctgtggagctgtcagcacaaacgcggcaggaagtggaagacttaatcaat
gagaaggaggcccagttcagggctaaacaagaggagcagtcgcgccttctggatgaactc
gccggcaagctgcagagcctggatctctccgaggtggctgagaagacgtgtggcactgct
ccgggagcctcctgcgctgagtccgagtgcgggggtttgaactgtcgaacggatgaagga
aagaagaagtgtggaggccccagctgtgacgggctggtgactgtagctcacaatgcctgg
cagaaggctatggattttgacagagacatcctcagtgccttagcagaagttgagcaactc
tccagaatggtttctgaggcaaaacagagagcagatgaagcaaaacaaaatgcacaagca
gttttgctcaaaaccaatgctacaaaagaacaagtagacagaagcaatgaagatctgaga
aatcttattaaacagatcagagacttcctaatgcaagacagtgctgacctggatagcatc
gaggcagtggctaatgaagtgctgaacatggagatgccaagcactccccagcagctgcaa
gccctgacagaagatattcgtgagcgtgtagaaagcctttctgatgttgaggtcattctg
cagcagagcgctggagacattgccagagcagaaatgctactggaggaagctaaaaaagcg
agcaaaggtgcgacagatgttaaagtcactgcagacatggtgaaagcagcactggaagaa
gctgaaaaagctcaaaatgcagctgaaaaagccatcaaacaagctgatgaagatattaaa
ggaactcaagacctgctgacttcaattgaatctgaaaatgcagcatctgcagaaacactg
aacaatgctaccttacgtctgtttgagctagagaagagtgttgaagaccttaggcaaaag
gctgctacaaattcagagaatgtgggaaatatagaagacaaaattactagtgcaaaacaa
aatgctgaagaagttaaaaaggtactcaacagcgagctgagcggcaagtacagaaccgtg
gaagagctcattgccaagaagacagaggagtcggctgaggccaggaggaaagcaggtgtg
ctgcaggatgaagctaaagccttgttggctcaagcaaacagcaaacttcagctgctcaaa
gatttggaaaatatgtatgaaaacaatcaaaaagttctggaagacaaagccaagcagttg
gtggagctggaagagacagttcgctccctcttacagacaatcagccagaaggttgctgtt
tatagcacctgcttatga
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