KEGG   Aphelocoma coerulescens (scrub jay): 138098407
Entry
138098407         CDS       T10543                                 
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
  KO
K05636  laminin, beta 1
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe04510  Focal adhesion
acoe04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    138098407 (LAMB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    138098407 (LAMB1)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 ATG17_like F5_F8_type_C
Other DBs
NCBI-GeneID: 138098407
NCBI-ProteinID: XP_068851062
LinkDB
Position
1A:complement(15503791..15546188)
AA seq 1785 aa
MGRLPLYLCCCLALWPAAAQEPEYSYGCAEGSCYPATGDLLIGRAARLSASSTCGLSQPE
PYCIVSHLQEDKKCFICDSKDPFHDTLNPDSHLIENVVTTFAPNRLKLWWQSENGLENVT
IQLNLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGQTWQVYRYFAYDCESSFPGISTGPM
KKVDDIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRVKFVKLHT
LGDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVEGFDEEVEGMVHGHCMCRH
NTKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNGHSSQCHFDMAVYMTTGNTSGGVC
DDCQHNTMGRNCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGGICDRYTDFSTGLI
AGQCRCKLFVEGERCDLCKEGFYGLSADDPAGCQSCACNPLGTHPGGNPCDSETGNCYCK
RLVTGKQCNQCLPEHWGLSNDMDGCRPCDCDPGGALNNNCSGESGQCECRPHMFGRQCNQ
VEPGYYFISLDHYIYEAEEANLGPGVNIIERQYTPDRTPSWTGIGFVRVPEGAYLEFYID
NIPYSMEYDVLIRYEPQLPDQWEKAVISVSRPGKIPTGSRCGNTVPDDDNQVVSLSPGSR
YVVLPRPVCFEKGLNYTIRLELPQYSSVDTETENPYTLIDSLVLMPYCKSLDIFTVGGSG
EDVVMNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCDPQGSLS
SVCDPNGGQCQCRPNVVGRQCDRCAPGTFGFGPSGCRPCECHVRGSYNAFCDVETGQCHC
FPGVYGRQCDRCLPSFWGFPSCQPCHCNGHADDCNPYTGECLSCRDHTAGHNCERCQAGY
YGDPILGSGDHCRPCPCPDGPESGRQFASGCYQDPVTLQVVCVCSVGYIGSRCDECASGF
FGSPDEVGGACQPCQCNNNIDTTDPEACDKRSGACVKCLYHTEGENCHLCRQGYYGSALQ
QDCRKCVCNYLGTVREDCEGSESCRCEAATGQCRCLPNVVGQTCDRCGPHTWRLASGTGC
EQCDCDPARSLGPACNEFTGQCHCMPGFGGRTCRECQELFWGDPAVECLACDCNPHGIQT
PQCDRATGQCICSEGVEGLHCDKCSRGYSGFFPDCMPCHQCFALWDVIISELANRTQQFL
DRANTLKITGVTGPYQQTLNTLEEKLTEIKTIVAQNPAAEPLKNIGNLFEEAEKLTADVT
VKIADIEENLSALAAKSNSTDTDLSALETDAKSLDHVVKELAEQLEFIKISDVRGALDSI
TKYFQMSLEAEERVNASTVHPDSAVELSAQTRQEVEDLINEKEAQFRAKQEEQSRLLDEL
AGKLQSLDLSEVAEKTCGTAPGASCAESECGGLNCRTDEGKKKCGGPSCDGLVTVAHNAW
QKAMDFDRDILSALAEVEQLSRMVSEAKQRADEAKQNAQAVLLKTNATKEQVDRSNEDLR
NLIKQIRDFLMQDSADLDSIEAVANEVLNMEMPSTPQQLQALTEDIRERVESLSDVEVIL
QQSAGDIARAEMLLEEAKKASKGATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDIK
GTQDLLTSIESENAASAETLNNATLRLFELEKSVEDLRQKAATNSENVGNIEDKITSAKQ
NAEEVKKVLNSELSGKYRTVEELIAKKTEESAEARRKAGVLQDEAKALLAQANSKLQLLK
DLENMYENNQKVLEDKAKQLVELEETVRSLLQTISQKVAVYSTCL
NT seq 5358 nt   +upstreamnt  +downstreamnt
atgggccgcctcccgctgtacctctgctgctgcctcgcgctgtggcccgcggcggcacag
gaacccgagtacagctatggctgcgccgagggcagctgctaccccgccaccggcgacctg
ctcatcggccgcgctgcccgcctctccgcctcgtccacctgcggcctcagccagcccgag
ccctactgcatcgtcagccacctccaggaggacaaaaaatgtttcatatgtgactcgaag
gatcccttccacgatactctcaatcccgacagtcacctcattgaaaatgtcgtcaccacg
ttcgctccaaatcgcctgaagctctggtggcagtcagaaaatggtttggaaaacgtgact
atccagctgaatctggaagctgagtttcatttcactcatctcattatgaccttcaagaca
ttccgtcctgctgcaatgttgattgaaagatcgtctgactttggacagacttggcaagtt
tacaggtattttgcatatgactgtgagagctcatttcctgggatttcaactggacccatg
aagaaagtggatgatataatttgtgattcccgatactctgacattgaaccttcaacagag
ggagaggtaatatatcgtgttctagatcctgcttttcgaattgaagatccatacagtcca
aggattcagaacctgttaaagatcacaaatctgagagtgaaattcgtcaagctgcacacg
ctgggagataacctcttggactccaggatggagatccgagagaagtactactatgccatc
tacgacatggtggttcgcgggaactgtttctgctacggacacgccagtgagtgtgcacca
gtggagggcttcgatgaggaagtggaaggaatggttcatggtcactgcatgtgcagacat
aataccaaaggattaaattgtgagcagtgtttggatttctaccatgacttaccctggcgt
cccgctgaaggccgcaacagtaacgcatgcaaaaagtgcaactgcaatggccactccagc
cagtgccactttgacatggctgtgtacatgacaacggggaacaccagcgggggcgtgtgt
gacgactgccagcacaacaccatgggacgcaactgtgagcagtgcaagcccttctacttc
cagcacccagagagagatctacgggaccctgacgtctgtgagccttgcaactgtgaccca
gctggctcccagaatggtgggatctgcgatcgctacactgatttctccactggcctcatt
gccggacagtgccgttgtaaattatttgtcgagggggagcgttgtgacctctgcaaagaa
ggtttctatggcctgagtgccgatgacccagcgggttgtcagtcttgtgcgtgtaatcct
ctgggtacccaccctggggggaatccttgtgattcggagacaggaaactgctattgtaag
cgtctggtgacaggaaagcagtgcaatcaatgtctgcctgagcactggggcctgagcaat
gacatggatggatgtcggccgtgcgactgcgacccgggcggagcgctgaacaacaactgc
tcaggtgaatctggccaatgtgaatgccggccccacatgtttggacgtcaatgcaaccag
gtggagcctggctattacttcatttcgcttgatcattacatctatgaggcggaggaagcc
aacttgggtcctggagtgaacataatagagcgccagtacacgccagaccgtacaccgtca
tggacaggcataggctttgtgagggtccctgagggggcatacctggaattctacattgac
aacatcccctactccatggaatatgatgttctgatccgctatgagccgcagttgcctgat
cagtgggaaaaagctgtgatcagtgtctcacgcccaggcaagatccccacaggtagccgg
tgtggcaacacagttcctgatgatgataatcaggtggtctcactgtcacctggatccaga
tatgttgttctcccacggcctgtgtgctttgagaaggggctgaattacaccatccgcttg
gagctgccccagtactcctcggtggacacggagacagagaacccatacacactcattgac
tctcttgttctcatgccatactgcaaatcactggacatattcacagtgggaggctcaggt
gaagacgtggtcatgaacagtgcttgggaaactttccaaagataccggtgtttggaaaac
agcaggagtgttgtgaaaactcccatgacagatgtctgcaagaacataatattcagcatt
tctgcactactgcatgagactgctttatcatgccagtgtgacccccagggctctctgagt
tcagtgtgcgaccccaatggaggacagtgccagtgtcgtcccaatgttgttggaagacag
tgtgacagatgcgcccctggcacctttgggtttgggccaagtggatgccgaccgtgcgag
tgccacgtccgaggctcttacaacgccttctgcgacgtggagacgggccagtgccactgc
ttccccggggtgtatgggcggcagtgcgaccgctgcctgcccagcttctggggcttcccc
agctgccagccctgccactgcaatggccacgctgacgactgcaacccctacactggggag
tgcctgagctgccgtgaccacacagccggacacaactgcgagagatgccaggctggctac
tacggagaccccatcctgggatcaggtgaccattgccgcccctgcccttgccctgatggc
cccgagagtggacgccagtttgccagtggctgttatcaggatccagttacactgcaagtc
gtgtgtgtctgtagcgtgggatacataggcagtcgatgtgatgaatgtgcgtctggcttc
tttgggagccccgatgaggttggtggcgcctgccagccgtgccagtgcaacaacaacatc
gacaccactgacccagaggcctgtgacaagaggagcggagcgtgcgtgaagtgcctgtat
cacaccgagggtgaaaactgccacctctgcaggcagggctactacgggagcgccctgcag
caggactgcagaaagtgcgtctgcaactacctgggcactgtccgggaggactgcgagggc
tcggagagctgccggtgtgaggcggccacggggcagtgccggtgcctcccaaacgtggtg
gggcagacctgtgaccgctgtggcccgcacacgtggcggctggccagcggcaccggctgc
gagcagtgcgactgcgaccccgcgcgctccctcggcccagcctgcaacgagttcacaggg
cagtgccactgcatgccaggctttggaggccggacctgccgggagtgccaggaactcttc
tggggcgacccagcggtggagtgcttagcatgcgattgcaaccctcatggcatccagacc
ccacagtgcgaccgtgccactgggcagtgcatctgcagtgaaggggtggaagggctgcac
tgtgacaagtgttcccggggctactcgggcttcttccccgactgcatgccgtgccaccag
tgctttgccctctgggacgtgatcatcagcgagctggctaaccggacccagcagttcttg
gacagggctaataccctcaaaatcactggagtcactggcccataccagcagacgctcaac
acgctggaggagaagctcacggaaattaaaaccatcgtcgctcaaaatccagcagctgag
cccctgaagaacattgggaatctcttcgaggaagcagaaaagctgacagcagatgttaca
gttaagatagctgacatagaagaaaacttatcagccttagcagcaaagagcaatagcaca
gacactgacctgagcgcgctggagacagatgccaaaagtcttgaccacgttgtgaaagaa
cttgcagagcagctagagttcatcaagatctctgatgttcggggagccttggatagtatc
accaagtatttccagatgtccctggaggcagaggagagggtcaatgcctccactgttcat
cccgatagcgctgtggagctgtcagcacaaacgcggcaggaagtggaagacttaatcaat
gagaaggaggcccagttcagggctaaacaagaggagcagtcgcgccttctggatgaactc
gccggcaagctgcagagcctggatctctccgaggtggctgagaagacgtgtggcactgct
ccgggagcctcctgcgctgagtccgagtgcgggggtttgaactgtcgaacggatgaagga
aagaagaagtgtggaggccccagctgtgacgggctggtgactgtagctcacaatgcctgg
cagaaggctatggattttgacagagacatcctcagtgccttagcagaagttgagcaactc
tccagaatggtttctgaggcaaaacagagagcagatgaagcaaaacaaaatgcacaagca
gttttgctcaaaaccaatgctacaaaagaacaagtagacagaagcaatgaagatctgaga
aatcttattaaacagatcagagacttcctaatgcaagacagtgctgacctggatagcatc
gaggcagtggctaatgaagtgctgaacatggagatgccaagcactccccagcagctgcaa
gccctgacagaagatattcgtgagcgtgtagaaagcctttctgatgttgaggtcattctg
cagcagagcgctggagacattgccagagcagaaatgctactggaggaagctaaaaaagcg
agcaaaggtgcgacagatgttaaagtcactgcagacatggtgaaagcagcactggaagaa
gctgaaaaagctcaaaatgcagctgaaaaagccatcaaacaagctgatgaagatattaaa
ggaactcaagacctgctgacttcaattgaatctgaaaatgcagcatctgcagaaacactg
aacaatgctaccttacgtctgtttgagctagagaagagtgttgaagaccttaggcaaaag
gctgctacaaattcagagaatgtgggaaatatagaagacaaaattactagtgcaaaacaa
aatgctgaagaagttaaaaaggtactcaacagcgagctgagcggcaagtacagaaccgtg
gaagagctcattgccaagaagacagaggagtcggctgaggccaggaggaaagcaggtgtg
ctgcaggatgaagctaaagccttgttggctcaagcaaacagcaaacttcagctgctcaaa
gatttggaaaatatgtatgaaaacaatcaaaaagttctggaagacaaagccaagcagttg
gtggagctggaagagacagttcgctccctcttacagacaatcagccagaaggttgctgtt
tatagcacctgcttatga

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