Aphelocoma coerulescens (scrub jay): 138098423
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Entry
138098423 CDS
T10543
Symbol
PRPF3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138098423 (PRPF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoe03041
]
138098423 (PRPF3)
Spliceosome [BR:
acoe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
138098423 (PRPF3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
138098423
NCBI-ProteinID:
XP_068851086
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All DBs
Position
25:813270..822672
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AA seq
684 aa
AA seq
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MSLSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSNSDRNRKRELKDVFGDDSEVSKESSGVKKRRIPRFEEVE
DEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKISSSSQSER
LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI
APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK
PSEDMESNTYFDPRVSITPAQRQKRTFKFHEKGKFEKIAQRLRTKAQLEKLQAEISQAAR
KTGIHTSTKLALITPKKELKEGEIPEIEWWDSYIIPNGLDLKGGAISKKDEYFGITNLVE
HPAQLNPPVDSDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRIS
NLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKAKKVKKLKEDVSQ
GVHIAVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLML
HRIKWDEQTSNTKGEDDDESDEESVKKTNKCSLVWEGTAKDRSFGEMKFKQCPTENMARE
HFKKHSAEHYWDLALSESVLESTD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtccaagcgggagctggacgagctgaagccatggatcgagaagacggtgaag
cgcgtgctgggcttctcggagcccaccgtggtcaccgcggcgctcaactgcgtcgggaag
ggcatggacaagaagaaagcggccgaccacctgaaacccttcctggatgattccaccctg
cgatttgtagacaagctctttgaggcagtggaggaaggacgaagctctcggcactccaaa
tccaacagcgaccggaaccggaagcgggagctaaaggatgtgtttggtgatgactcggag
gtgtccaaggaatcctctggcgtcaagaagcggcgcatcccccggttcgaggaggttgag
gatgagcctgaagtcattccaggcccaccatcggagagcccagggatgctgactaagctc
cagatcaaacagatgatggaggcagccacccggcagattgaagagaggaaaaagcagctg
agtttcatcagtcctccaacgccacagcccaaaatttcttcttcgtcccaatcggagcgg
ctccccatcggcaacacgatccagccctcgcaggcagccacgttcatgaacgacgccatc
gagaaggccaggaaagctgcggagctgcaggcccggatccaggctcagctggccctgaaa
ccggggctcatcggcaacgccaacatggtggggctggccaacctgcacgccatgggcatc
gcgccgccgaaagtggagctgaaggatcagaccaagccgacgccgctgatcctggatgag
cagggccggacggtggatgcgaccgggaaggagattgagctgactcaccgcatgccgacc
ctaaaggccaacatccgagcggtgaagagagagcagttcaaacagcagcttaaggaaaag
ccctcggaagacatggagtcaaacacgtactttgacccccgggtctccataaccccggcc
cagcggcagaaacgcacctttaagttccatgaaaaaggcaaatttgagaaaattgcccag
aggttgcgaacgaaggctcagctagaaaagctgcaggcagagatctcccaggctgccagg
aaaactgggattcacacttccaccaagttggctctgatcacccctaaaaaggagctgaag
gaaggggagatcccagagatcgagtggtgggactcctacatcatccccaacggcctggat
ttaaaaggcggggctatctcaaagaaggacgagtacttcgggatcacaaacctggtggag
cacccggcccagctcaaccccccggtggacagtgacacgccggtgaccctgggggtgtat
ttaacaaagaaagagcagaagaaattacggcgccagacacggcgagaagcccagaaggag
ctgcaggagaaggtcaggctgggcctgatgccaccgcctgagcccaaagtgaggatttcc
aacctgatgcgggtgctgggcacggaagctgtccaggacccaaccaaggtggaagctcac
gtccgagcgcagatggccaagagacagaaggctcacgaggaagcaaacgcggcaaggaag
ctcacggcagagcagcggaaagccaagaaggtgaaaaagctcaaggaagatgtttcacag
ggagttcacatagctgtgtacagggtccgaaacttgagcaatccagcaaaaaaattcaaa
attgaggcgaatgctgggcagctgtacctcacgggcgtggtggtcctgcacaaagatgtc
aacgtggtggtggtagaaggaggcccgaaagcacagaagaaattcaaacgtcttatgctg
catcgaataaagtgggacgagcagacgtcaaacacgaagggagaggatgatgacgagtct
gacgaggagtctgttaagaaaacaaacaaatgctctctggtttgggagggcacggcaaag
gatcgcagcttcggcgagatgaagttcaagcagtgccccacggagaacatggcgcgggag
cacttcaagaagcacagcgccgaacactactgggacctggcgctcagcgagtccgtgctc
gagtccacggactga
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