Aphelocoma coerulescens (scrub jay): 138098430 Help Entry 138098430         CDS       T10543                                  Symbol COPA Name (RefSeq) coatomer subunit alpha   KO K05236   coatomer subunit alpha Organism acoe  Aphelocoma coerulescens (scrub jay) Brite KEGG Orthology (KO) [BR:acoe00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:acoe04131]     138098430 (COPA)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:acoe04147]     138098430 (COPA) Membrane trafficking [BR:acoe04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     138098430 (COPA) Exosome [BR:acoe04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    138098430 (COPA)   Exosomal proteins of bladder cancer cells    138098430 (COPA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_WDR41 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_Aladin Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  138098430 NCBI-ProteinID:  XP_068851096 LinkDB All DBs Position 25:1272704..1301677 Genome browser AA seq 1224 aa AA seqDB search MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW NWQSRTCVCVLTGHNHYVMCAQFHPAEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH PNLNLFAAGHDGGMLVFKLERERPAHAVHGNSLFYVKDRFLRQLDFGSSKDVAVMQLRSG SKFPVFNMSYNPAENSVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDSDSITLFDVQQK RTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV FIYTTSNHIKYAVTSGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFRFK LALINRKYDEVLHMVRNAKLVGQSIIAYLQRKGYPEVALHFVKDEKTRFSLALECGNIEI ALEAAKALDDKGCWEKLGEVALLQGNHQVVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM KIAEIRKDMSGHYQNALYLGDVAERVRILKSCGQKSLAFLTAATHGLDEEAESLRESFDP EKETIPAVDPEARLLQPPAPVLPLDTNWPLLTVSKGFFEGTIAGKGKGGALAADIDMDAV GTEGWGEDAELQLDEDGFVDAGEGFGEEGMGKGPEEGGGWEVEEDLDLPPELDVPAGPAG AAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVTNFGPYKQLFL QTFSRGRTTFQALPSLPAMYGFPHRNWKEAGPKTALPAVGLKLNDLIQRLQLCYQLTTAG KFEEAVEKFRLILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEQ QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKSAATFARRLLELGPKPEVAQQ TRKILSACEKNPSDSHQLNYDQHNPFDICAASYRPIYRGKPLEKCPLSGACYSPEFRGQI CRVTTVTEIGKDVLGLRISPLQFR NT seq 3675 nt NT seq  +upstreamnt  +downstreamnt atgttgaccaaattcgagaccaaatccgcgcgggtgaaagggctcagcttccacccgaag cggccctggatcctcacgagcctccacaacggcgtcatccagctctgggattaccgcatg tgcaccctcatcgacaaattcgacgagcacgacggcccggtccgagggatcgatttccac aagcagcagccgctcttcgtctccggcggcgacgattacaaaatcaaggtgtggaattac aaactgcgccgctgcctcttcaccctgctgggccacctggattacatccggacaaccttc ttccaccacgaatatccctggatcctgagcgcttccgacgaccaaaccatccgggtgtgg aactggcagtcccggacctgcgtctgtgtcctgacgggccacaaccattacgtgatgtgc gcccagttccaccccgccgaggacctggtggtgtcggccagcctggaccagaccgtcagg gtgtgggatatatccgggctccgtaagaagaacctctctcccggcgcggtggaatccgac gttcgcggcatcaccggcgtcgacctcttcggcaccaccgacgccgtggtcaagcacgtc ctggagggccatgaccggggggtgaactgggccgccttccacccgtccatgccgctcatc gtgtcgggcgccgacgaccgccaggtgaagatctggaggatgaacgaatccaaggcctgg gaggtggacacgtgccgcgggcactacaacaacgtttcctgcgccgttttccacccgcgc caggagctgatcctcagcaactcggaggacaagagcatccgcgtctgggacatgtccaag cggaccggcgtccaaacgttccggcgcgaccacgaccggttctgggtgctggcggcgcat cccaacctcaacctcttcgccgccggccacgacggggggatgttggtgttcaagctggag cgggagcggccggcgcacgccgtgcacggcaattccctcttctacgtcaaggatcgcttc ctgcggcagctcgacttcggcagctccaaggacgtggccgtgatgcagctccggagcggc tccaagttcccggtgttcaacatgtcctacaaccctgccgagaattccgtgctgctctgc acccgagccagcaacctggagaacagcacctacgacctctacaccattcccaaggacgca gattcccaaaatcccgacgctccggaggggaagcgcagctcggggctcacggccgtgtgg gtggcgcggaatcgcttcgctgtgctggacaggatgcactcgatccttatcaagaacctg aagaacgagatcaccaagaaggttcaggtgcccaactgcgacgagattttctacgccggc accgggaatctgctcctgagggactcggattccatcaccctcttcgacgtccagcagaaa aggactttggcgtcggtgaagatctccaaggtgaagtacgtgatctggtcggccgacatg tcccacgtggcgctgctggccaagcacgccatcatgatctgcaaccggaagctggaatcg ctgtgcaacatccacgagaacatccgggtgaagagcggcgcctgggacgagagcggcgtc ttcatctacaccaccagcaaccacatcaaatacgccgtcaccagcggggatcacgggatc atccgcaccctggacctgcccatctacgtgacgcgcgtcaagggcaacaacgtctactgc ctggaccgcgagtgccggccccgcgtgctcaccatcgaccccaccgagttccgcttcaaa ctggcgctcatcaacaggaagtacgatgaggtgctgcacatggtgcgcaacgccaagctg gtggggcagtcgatcatcgcgtacctgcagcgcaagggctaccccgaggtggcgctgcac ttcgtcaaggacgagaagacgcgcttcagcctggccctggagtgcggcaacatcgagatc gccctggaggccgccaaggcgctggacgacaagggctgctgggagaagctgggcgaggtg gcgctgctgcagggcaaccaccaggtggtggagatgtgctaccagcgcaccaagaacttc gaccgcctctccttcctctacctcatcaccggcaacctggagaagctgcgcaagatgatg aagatcgccgagatccggaaggacatgagcgggcactaccagaacgcgctgtacctggga gacgtggccgagagggtccggatcctcaagagctgcgggcagaagtcgctggcgttcctg acggccgccacgcacgggctggacgaggaggccgagagcctgcgggaatccttcgatccc gagaaggagacgatcccggccgtggatcccgaggcgcggctgctgcagcccccggccccg gtgctgcccctggacaccaactggcccctcctgaccgtgtccaaagggttcttcgaggga accatcgccgggaaagggaaaggaggagccctggccgccgacatcgacatggacgccgtg ggcaccgagggctggggcgaggatgcggagctgcagctggatgaagacggattcgtggat gccggagaaggattcggagaggaaggaatgggaaaagggccggaggaaggaggaggatgg gaagtggaggaagatttggatcttccccctgagctggatgtccccgccggccccgcggga gcagctgaggacggattcttcgtgccccccaccaagggcaccagcccagcccaggtgtgg tgcaacaattcccagctccctgtggatcacatcctggcgggatccttcgagacagccatg agactgctccatgaccaggtgggagtgaccaactttggcccctacaagcagctcttcctg cagaccttttcccgaggccggacgacattccaggcccttcccagcctccccgccatgtac ggattcccacaccgcaactggaaagaggctgggcccaagacggcgctcccggccgtgggg ctgaagctgaacgacctcatccagcggctgcagctctgctaccaactgaccacggccggg aaattcgaggaagccgtggagaaattccggctgatcctgctcagcgtccccttgctggtg gtggacaacaagcaggagatcgccgaggcgcagcagctgatcgcgatttgccgggaatac atcgtgggattgtccatggagattgagaggaagaagctgcccaaggagacgctggagcag cagaagaggatctgtgagatggccgcctacttcacgcactccaacctgcagcccgtgcac atgatcctggtgctccgcaccgccctcaacctcttcttcaaactcaagaacttcaagagc gccgccaccttcgcccgccgcctgcttgagctcggccccaagcccgaggtggcccagcag acacggaagatcctgtcagcctgcgagaagaaccccagcgacagccaccagctcaactac gaccagcacaaccccttcgacatctgcgccgcctcctaccgccccatttaccgcgggaaa cccctggaaaagtgtcccctcagcggggcctgctacagccccgagttccgcgggcagatc tgccgcgtcaccacggtgacagagatcgggaaggacgtcctggggctgcgcatcagcccc ctccagttccgttag

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