Aphelocoma coerulescens (scrub jay): 138098455
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Entry
138098455 CDS
T10543
Symbol
LAMB4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04510
Focal adhesion
acoe04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138098455 (LAMB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138098455 (LAMB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB4
LAMB1
Rod_CreS
Tropomyosin
DUF8003
DUF724
Motif
Other DBs
NCBI-GeneID:
138098455
NCBI-ProteinID:
XP_068851127
LinkDB
All DBs
Position
1A:complement(15550823..15590669)
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AA seq
1807 aa
AA seq
DB search
MRLGLAILLHFMLIRCQHAQHDCDAGSCHPALGDLLRGRSKQLTASSTCGMNSPQKYCII
GYLEAEEKCFLCDSRYPYNPYTQHNSHMVENVITMFEPERKRKWWQSENGIDHVSIRLDL
ETLFQFSHLILTFKTFRPAAMLVERSTDFGQTWKVFRYFAHDCAASFPNISSGPAKSVGD
VVCDSRYSDIEPSTEGEVVLKALDPSFEIENPYVPYIQELITLTNLRINFTKLHTLGDAL
LGRRHSDPLEKYYYAIYEMVVRGSCFCNGHASLCDSVQNVRGDVFHQSGMVHGRCICHHN
TEGLSCERCKDFYNDVPWRPAEGTQDNACKRCNCNSHSSRCHFDMAVYQASGGVSGGVCE
DCEDNTTGQHCDKCKRFFYQDPLKVISDPQACLPCNCDPEGTLHEGVCESHTDPTLGTVA
GRCPCKENVEGARCDKCRANYYGLSSSDPLGCQPCNCDPLGSLPFSICDPATGECLCQKF
TTGQHCEKCLVGYWGLGNSLYGCSPCGCDIGGSQNNLCSPKDGQCECLPNIVSRQCNEPA
PGYFFLPLDYYIYEAEHAKPLSGSAPLVQPSTLPRCDIYFQKKGYEFMIENGKIVLNRNK
KRTVRKSGLEQGVMQFGQDSVSEVVFRQPSAGRAVTWTGHGFARVPSGAGLRFAINNVPF
AMDFDITIRYEPEFLEDWLASVAIQPAGILSGQRCKNKVLSPEPHKLPLPATKRIALLQT
PVCLEPGTEYFVDVYFSQLSASDKKAKSFILIDSLGLIPRIGSVENLCSEKDLDEYQKYH
CIEIASEVGPHVLPEACARLIVSLSARIHNGAVACKCNAQGSLNANCSKLGGQCQCKANV
VGRCCDTCSAGSYGFGFHGCYACECHPQGSLSTLCDQVTGQCSCRREVDGQRCSRCLAGY
FGFPHCRPCPCNGHAELCDPLTGVCLNCRGFTAGSHCERCMDGYYGNPLDGEPCRPCMCP
GAPTSNRYFARSCYQDSQSAQLVCNCLKGYSGNQCDECPSGFYKNPSSPGLDCAPCPCNN
NIDLTDPESCNRVTGECTKCLHNTHGANCQFCKPGYFGSALNQNCQSCMCNLAGVQPAMC
PGGDAACLCDPATGACPCLPNVLGATCDQCASGYWDLASGKGCQTCDCDPKNSQSNQCNQ
VTGQCPCKPGYSGRCCNECEENYFGNPQMHCASCECNLDGTRHPTCDKATGACNCRAGVT
GRLCDQCGRGFEKDFPSCRRCHLCFDQWDSEIAALAQTVQGLMRFAAKLEDKGGRMPSCD
MRFKAFEDAISETEQILKHPVLSLEALSGIRDFQGYLQQKVAQMDPLHSLPHEFPDLNKN
IEDIGKEADLVFELLQQKIHLHQSFHYLNFKEAVSNIRKHFEVSLLAEQKTRGTTPIVRY
SEYTRNHALAVLDHQVLKASNVLQQLRMIKSPAIQNLNEKICGVPGDQPCATAACGGALC
QDSHGLRQCGGPDCSGALPLSSQAFRKAEETAVLLNNLTTQLQEPENQVDSMRKIAEDSK
LKGSRFNGQLEMAKNQIEVDGEITKEFIQKVKDFLLDESAPPEDIEKVANYVLQISLPLT
PQELTGMLSKLKSIMNHCEKSTLNNKRNIKREDAQTLLVEAQEADKAAKALPPVDEINNQ
LKNVVKSQGHSKNTIIKLNEEIQGIRTQISQAENQVNKTNNKLNDLSAKQTEMEDESATW
QAKTLMNKNQATKARAEAEAAHKRAQNIDNEFADIKRKYTILQEKLKTQGPLKVTLEKVK
QLKEEAEKLAEETEKKIKRITDLEKKLQELNQTKQDKAEQLRQLEEQVIAIKNEIMEQGS
KYATCKS
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggggctggccatcctgttacacttcatgctgataagatgccagcatgcacag
catgactgtgatgctgggtcctgccacccagcccttggggaccttctccggggtcgcagc
aagcaactgacagcctcatcaacctgtgggatgaatagccctcagaagtactgcattata
ggctacctagaggctgaggagaagtgctttctctgtgattccagatacccatataatccc
tatacccagcacaacagtcacatggttgaaaatgttatcacaatgtttgagcccgaaagg
aaaaggaagtggtggcagtcagaaaatggcattgaccatgtcagcattagattggacctt
gaaactttattccagttcagccatcttatcctgacctttaagacatttcggcctgcagca
atgctggttgagcgctctaccgactttggtcagacctggaaagtgtttagatattttgca
catgattgtgcagcttcttttcccaacatctcttctggtccagcaaaaagtgttggggat
gttgtctgtgattcaagatattcagacatcgagccctccactgaaggcgaggttgtttta
aaagctttggatcccagctttgaaatagaaaatccgtatgtgccatatatccaagagctc
attacactgacaaacctaaggatcaattttactaaactccacacccttggtgatgctctg
cttgggaggaggcacagtgatccacttgagaagtactattatgccatctatgagatggtt
gtgcggggcagctgcttttgcaatggccatgccagcctgtgtgattctgtgcagaacgtg
cggggagatgttttccatcagtctgggatggttcatgggagatgtatctgccaccataac
actgaaggtttgtcttgtgaaagatgtaaagatttctacaatgatgttccctggaggcca
gctgaagggacacaagataacgcttgcaaacgttgtaactgcaacagccactccagcaga
tgccactttgacatggccgtgtaccaggccagcggcggggtcagcggaggcgtttgtgag
gactgtgaggacaacaccactgggcaacactgtgacaagtgcaaacgtttcttttaccag
gatccactcaaagtcatctcagatcctcaggcgtgcctcccatgcaactgtgaccccgag
ggtaccttgcacgagggcgtgtgcgagagccacacggatcccacgctggggacagtcgcg
ggccggtgcccctgcaaggaaaatgtggagggcgctcgctgtgacaagtgcagggcaaac
tactatgggctgagcagcagcgaccccctgggctgccagccctgcaactgtgatcccttg
ggcagtttgcccttctccatctgtgatcctgccacgggagagtgcctctgccagaagttc
accacagggcaacactgtgaaaaatgccttgtaggatactggggtcttggcaacagcttg
tatggctgttctccatgtggctgtgatattggtggatcccagaataacttgtgctcacca
aaggatggtcagtgcgagtgtctgcccaacattgtgagccgccagtgcaacgagccagct
ccaggatacttctttctacccctggattattatatttatgaagctgagcatgcaaagccc
ctttctggctctgcacccttggttcagccaagcactcttccaaggtgtgacatctatttc
cagaagaaaggctatgagttcatgattgaaaatggaaagatcgtgttaaacaggaacaag
aaacgaactgtaagaaaatctggactggaacagggtgtgatgcagtttggacaggactcg
gtttcagaagtggtgttccggcagcccagcgctggtcgagctgtcacatggacaggacat
ggctttgcccgtgttcccagtggagctgggctgagatttgccatcaacaatgttcccttt
gctatggactttgatatcacaattcgttatgagcctgagttcttggaagactggcttgca
agtgttgccatccagcctgctggtatcttgtcaggtcaacgctgcaaaaacaaggtcctt
tcaccggagccacacaagttacctctcccagctacaaagaggattgcacttctgcaaact
ccagtctgcctggagccgggaacggaatattttgtggatgtgtatttttctcagctctct
gcctctgacaaaaaggcaaaatcattcatcttgattgactcacttggacttattcccaga
atcggctctgtggagaatttatgcagtgaaaaggatttagatgagtaccagaagtatcac
tgtattgaaattgcatctgaagttgggcctcacgtcctgcccgaagcgtgcgcgcggctc
atagtgagcttgtcagcccgaattcacaacggcgccgtcgcatgtaagtgcaatgcccaa
gggtcgctgaatgccaactgtagtaaactggggggccagtgtcagtgcaaagccaacgtc
gtgggacgctgctgtgacacctgctctgcaggcagctacggctttggcttccatggctgc
tacgcgtgcgagtgccacccgcaaggctcgctgagcacgctgtgcgaccaggtgacgggg
cagtgctcctgccgccgggaggtggatggccagcgctgcagccgctgcctggccgggtac
tttggattcccccactgccgtccttgcccttgtaatggccatgcggagctgtgcgaccct
ctgaccggagtgtgcctcaactgccgtgggtttacagctggaagccactgtgaaaggtgc
atggatggctattatggaaatcctctggatggagaaccctgccgcccatgcatgtgccca
ggggcacctacaagcaataggtattttgcacgttcctgttaccaggactcccagtctgct
cagctagtctgtaattgtctcaagggatattcaggcaatcagtgtgatgagtgtcctagt
gggttctacaaaaacccaagcagccctgggcttgactgtgcaccatgtccctgcaacaac
aacattgatttgacagacccagagtcctgtaacagggtcaccggggaatgcaccaagtgt
ttacacaacacccatggtgcaaactgccagttctgcaaaccaggttactttggctcagcc
ctcaatcaaaactgtcaaagttgcatgtgcaatctggccggtgttcagcctgccatgtgc
ccagggggggacgcagcctgcctgtgtgacccagccacaggagcttgtccttgcctgccc
aatgtgctgggtgccacatgtgaccagtgtgcctctggctactgggacctggctagcgga
aaaggatgtcagacctgtgactgtgatccaaaaaattcccaaagcaaccagtgcaaccag
gttacaggccagtgtccatgtaagccaggttacagtggaagatgctgtaatgaatgtgag
gaaaactactttggcaatccccagatgcattgtgcttcatgtgaatgtaacctggatggg
acccgccatcccacgtgtgacaaagccaccggcgcgtgtaactgccgtgccggcgtcact
ggccggctctgcgaccagtgcggccgcggctttgagaaggactttccctcctgccgtcgg
tgtcatctttgttttgatcagtgggactctgaaattgctgcccttgctcagactgtgcag
gggttaatgaggtttgcagcaaagctggaagataaaggaggacgaatgcccagctgtgac
atgcgcttcaaagcctttgaagatgccatttctgaaactgaacaaattttgaaacatcct
gtcctttcactggaggccctttcaggcatcagggattttcagggctaccttcaacaaaaa
gttgcacagatggatccccttcacagtttgccccatgagtttcctgaccttaacaagaac
atagaagatattggaaaagaagctgacctagtgtttgaacttctacaacagaaaatacat
ctgcatcaaagttttcattacttgaacttcaaagaggccgtcagcaacatcaggaaacac
tttgaagtatcattgctggcagaacagaagaccagggggacaacccctattgtaagatat
tcagagtacaccaggaaccacgcactcgctgtgttggaccatcaggtcttaaaagcaagc
aatgtgctgcaacagctcagaatgatcaaaagccctgccatccaaaacttgaatgaaaag
atctgtggtgtgccaggagaccagccatgtgccacagcagcctgtgggggagctttgtgc
caggacagtcacggactaaggcagtgtggtggcccagactgcagtggagctcttcctctc
tcctctcaggccttcaggaaagctgaggagactgctgtgttgctaaataacttgactact
cagctacaggaacctgagaatcaggttgacagcatgagaaaaatagcagaagacagcaaa
ctgaaaggctcacgatttaatgggcaactggagatggctaagaatcaaattgaagttgat
ggagagatcactaaggagttcatccaaaaagtgaaagacttcttgttagatgagagcgca
cctccagaagacattgagaaggtggcaaattatgttctgcaaataagccttcccctgact
ccacaagagctcacaggcatgcttagcaaactcaaaagcattatgaatcactgtgagaag
tccacactgaataataagagaaacataaaaagggaggatgctcagacactgctggtggag
gcacaagaagctgacaaagcagctaaagctcttccacctgtagatgaaattaataatcaa
ctaaaaaatgttgtgaagtcccaaggacactccaaaaacaccatcataaagttaaatgaa
gagatacaaggcatcagaacacaaatctctcaggctgagaaccaagtgaacaagacaaac
aataaactaaatgacttgtcagccaaacagactgagatggaagatgaaagcgccacatgg
caggcaaaaacactgatgaacaagaatcaagctacaaaggcaagagcagaggcagaagca
gctcacaagagagcccagaatattgacaatgaatttgctgacattaaaagaaagtacacc
attcttcaagaaaagctaaaaacccaaggacctctaaaagtcacactagaaaaagtgaag
cagttgaaagaagaagcagaaaaactggctgaagagactgaaaagaagataaaaagaata
acagatttggagaagaagcttcaggaactgaatcaaaccaaacaagataaggcagagcaa
ctgagacaactagaggaacaagtgatagccattaaaaatgaaatcatggagcagggaagc
aagtatgcaacatgcaagagttag
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integrated database retrieval system