Aphelocoma coerulescens (scrub jay): 138098594
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Entry
138098594 CDS
T10543
Symbol
ITGA10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04510
Focal adhesion
acoe04512
ECM-receptor interaction
acoe04810
Regulation of actin cytoskeleton
acoe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138098594 (ITGA10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138098594 (ITGA10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138098594 (ITGA10)
04810 Regulation of actin cytoskeleton
138098594 (ITGA10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acoe04515
]
138098594 (ITGA10)
Cell adhesion molecules [BR:
acoe04515
]
Integrins
Integrin alpha subunits
138098594 (ITGA10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_3
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
138098594
NCBI-ProteinID:
XP_068851337
LinkDB
All DBs
Position
25:complement(651197..661313)
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AA seq
1152 aa
AA seq
DB search
MWGVESRGMLLALFLLPGLCEGFNIDVGQPRVFQGSPESQFGYRVLQWGGDGNKWLLVGA
PWDGNGQGDIYKCSVGLQNSSCAKASLGATAPWLRSSAGHLGMTLVDSKDGGFVACAPLW
SQECGTSVFSSGRCVQLNEELQLVGTIAPTAQRCSTYMDIILVLDGSNSIYPWEEVQAFL
GNILGRFFIGPGQTQVGVLQYGERLVQEWALGQHPTAQRLLEAARNLTRQEGRETRTAMA
IRQACTESFSPAQGGRPGATRLLLVVTDGESHDGDELPAALAECDRHNVTRYAIAVLGHY
LRRQQDPEDFIREIKSIASDPDEKYFFNVTDEAALSDIVDALGDRIFSLEGTHGDNESSF
ELEMSQIGFSIHRLEDGILFGMVGAYDWEGGVLEESQRGRIVPPREAFQEEFPLELKNHA
AYLGYSVSSLQLPGGQRLFVAGAPRFQHKGKVVLFQLDPTGTVTVAQALMGEQIGSYFGS
EVLALDLEGDGDSDLLLVAAPTYLGGQSRETGRVYVYRVGQDRLIPAGSLHPEPRPQDSR
FGSALGAVPNLSQDGLTGAVVGAPLEDGHRGALYVFHGAPGTLLPQYKQRIEAAALGWSL
RYFGISVDGRVDMDGDGLVDVAVGAQGAAVVLRSRWIVQVSAWMSVEPAAVSITRQNCQR
SGSSAVCLRARICFRAETRARNPVDMDLDLRYNVSLEERTPGSRAAFDSGARRLLQRRME
FPLGRQSCVRVPFHVLDTSDYLRPLSLTLTWALDAAARSVLDEASPTTIRKLIPFFKDCG
DDDECVTDLVLKATTDIVGSRQSPHILRKGRRRMLVEVELENRKENAYNASLCLHLPGNL
HFSSLVLQDPSTVKLECSALGGHHQHCSVGYPVFRSQAKVSFTLELEFSCSVLLGHAEVM
LQATSDSTEATPEDNVVKLSVPILYEPDLFLSSNTDLHRYEVHPLGTFTHSSGPEFTTTV
KVQNFGCYPIQNVTLHMALPALGHRQATILSVTRVLADNATCVLQPPPEGTQVVPVPPED
LLHVDRLDCSNTWCQELSCRLGRLERGGGVSVQLLRTLHDSFFSGVKFQSVRIVSSVWLG
VAGGVLVLEKGAQRRELVLEVLQGRRVPVSLWILGGSALGGLLLLALLSLGLWRLGFFSH
PKPSREEEDEEH
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcgtggagagccgggggatgcttctggcgctcttcctgctcccaggactctgt
gagggattcaacatcgacgtggggcagccgcgggtcttccaggggtcccccgagtcccag
tttgggtaccgggtgctgcagtgggggggcgatgggaacaaatggctgctggtgggagcc
ccgtgggatgggaacggtcaaggtgacatctacaagtgcagcgtgggactccaaaactct
tcctgtgccaaggccagcctcggggccacggctccgtggctccgcagcagcgctggacac
ctcgggatgacgctggtggactccaaggatggtggatttgtggcatgcgccccactttgg
tcccaggagtgtggcacctctgtgttcagctctggccgctgtgtccaactcaatgaggag
ctccagctcgtggggaccattgcacccacggcacagcgctgttccacctacatggacatc
atcctggttctggacggctccaacagcatctacccctgggaggaggtgcaggcattcctt
gggaatatcctgggacgcttcttcattggtcctgggcagacccaggtgggggtgctgcag
tacggggagcggctggtgcaggagtgggcactggggcagcaccccacggcccagcgcctg
cttgaggccgcccggaacctgacgcgtcaggaggggagggagacacgcacggccatggcc
atccggcaggcatgcacagagtccttcagcccggcgcaaggcgggcgcccaggggccacg
cggctgctgctggtggtgacggacggagagtcccacgatggggacgagctgccagcggcg
ctggcggagtgtgaccggcacaatgtcacccgctatgccatcgctgtcctggggcactac
ctgcgtcggcagcaggatcccgaggatttcatccgggagatcaagtccatcgccagcgac
cccgatgagaagtatttcttcaatgtcacagatgaggctgccctcagtgacattgtggat
gctctgggagatcggatcttcagcctggaaggcacccatggagacaacgagagctccttt
gagctggagatgtcccagatcggcttctccatccatcgccttgaggatgggatcctcttt
ggaatggtgggagcctatgactgggagggcggtgtgctggaggagagccagcgtggacgc
attgtcccaccccgcgaagcgtttcaggaggaattccccctggagctgaagaaccatgca
gcgtatctgggctactccgtgtcctcgctgcagctcccgggggggcagcgcttgtttgtg
gctggagccccccgattccagcacaagggcaaagttgtcctcttccagctggaccccaca
gggactgtgacggtggcccaggcactaatgggggagcagattggctcctacttcggcagc
gaggtcttggccctggacctggagggagatggggacagtgaccttctgctggtggcagca
cccacctacctggggggccagagcagggagacgggaagggtctatgtgtaccgtgtgggg
caggaccgcctgatccccgcggggtcgctgcaccccgagccgaggccgcaggattccagg
ttcggctccgccctgggcgcggtgccgaacctgagccaggacgggctgactggagccgtg
gtgggagctccgctggaggacgggcaccgcggggctctctacgtgttccacggcgccccg
ggcaccctcctgccccagtacaagcagcgcatcgaggcagcggcgctggggtggagcctc
cggtatttcgggatcagcgtggacggacgggtggacatggacggggacgggctggtggac
gtggccgtgggggcgcagggtgcagctgtagtgctgcggtcccgctggatcgtccaggtg
tccgcgtggatgtctgtggagccagcagctgtcagcatcacacgacagaactgccagcgc
agcggctccagcgccgtctgcctccgggcccggatctgcttccgtgccgagacacgcgca
cggaaccccgtggacatggatctcgatctccggtacaacgtatccctggaggagcggacc
ccaggatcccgtgctgcctttgactcgggtgcccgccggctgctccagcgccgaatggag
ttcccactgggaaggcagagctgcgtccgcgtacccttccacgtcctggacacctcagat
tacctgcggcccctcagcctcaccctcacctgggccctggatgcagctgcgaggtcggtg
ctggatgaggcatctcccaccaccatccgtaaactgatcccgtttttcaaggattgtggg
gacgatgatgagtgtgtcaccgacttggtgctcaaggccaccacggacattgtgggctcc
aggcagagcccccacatcctgcggaagggccggaggcggatgctggtggaggtggagctg
gagaaccggaaggagaatgcctacaacgccagcctgtgcctgcacctgcccgggaacctc
cacttctccagtctcgtgctccaggatcccagcacggtgaagttggagtgctcagcgctg
gggggccaccaccagcactgcagtgtcgggtacccagtcttccgctcacaggccaaggtg
tccttcaccctggagctggagttcagctgctccgtccttctgggccatgccgaagtcatg
ctccaggccaccagtgacagcaccgaggcaacaccagaggacaacgtcgtcaagctttct
gtccccatcctctatgagcctgacctgttcctgtccagtaataccgacctgcatcgctac
gaggttcatccccttggcaccttcacccacagctccggccctgagttcaccaccacggtc
aaggtgcagaattttgggtgctaccccatccagaacgtcacactgcacatggccctacca
gcactgggccaccgccaggccaccatcctgtctgtcacccgtgtcctggctgacaacgcc
acttgtgtgctgcaacccccccctgaggggacacaggtggtcccggtgccccctgaggac
ctgctgcacgtggacaggctggactgttccaacacctggtgccaggagctgagctgccgc
ttggggaggctggagcgtggcgggggagtctctgtccagctcctccgcactctccacgac
agcttcttcagcggagtgaaattccagagtgtgaggattgtcagcagtgtctggctgggg
gttgcggggggcgtgttggtgctggagaagggggcgcagcgcagggagctggtgctggaa
gtgctccagggaaggcgggtgcccgtgtccctgtggatcctggggggcagcgccctgggg
gggctcctgctcctggcgctgctcagccttggcctctggaggctgggattcttctctcac
ccgaagccctcccgggaggaggaggacgaggagcactga
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