Aphelocoma coerulescens (scrub jay): 138098612
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Entry
138098612 CDS
T10543
Name
(RefSeq) signaling lymphocytic activation molecule-like
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
acoe04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
138098612
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138098612
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acoe04515
]
138098612
04090 CD molecules [BR:
acoe04090
]
138098612
Cell adhesion molecules [BR:
acoe04515
]
Immunoglobulin superfamily
SLAM/CD2 family
138098612
CD molecules [BR:
acoe04090
]
Proteins
138098612
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Motif
Other DBs
NCBI-GeneID:
138098612
NCBI-ProteinID:
XP_068851367
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Position
25:1194817..1201805
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AA seq
349 aa
AA seq
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MGSGAWLRLLLALGALWGIGAREKVLGTLGKATLLRIPRQLQERTLDFGEASWKRSTEEP
QKKKFLLKFSGGNYTEFEPGRMRFHTLDFSLEILNTSRGDGQLYEYSVSKGPEEEVWQVQ
LEVFEPVANPSIRILHQELSNGSCSLTLLCTSERGDEVSYSWDSRDNGTWEICSGNGSFL
NLSYSLWSAGFGCVCTARNPVSSRDVAFDSSQCGSEQPGDPGLRTELLVLLAGLGAVVIV
IVVMVAFRATHLAKRDQDPSWPVPDLSQVTPASTSPTIYAQVQRVQKPKGTVPNATSSSC
ATIYTVATGPPPAPDGAPWSPAGSPTPQGHPPLSQEPTTVYASVTLPVA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgggctccggcgcttggctccggctgctcctcgccctcggagctctttgggggattgga
gccagggaaaaggtgctgggaaccttgggaaaggcgacgctgctgcggatcccccgccaa
ctccaggaacgcaccctggacttcggggaagcctcctggaaaagatccacggaggagccg
cagaagaagaaattcctgctgaagttttccggcgggaattacacggagttcgagccgggg
cggatgcgcttccacacgctggacttttccctggaaatcctcaacaccagccggggggac
gggcagctctatgagtacagcgtcagcaaggggccggaggaggaggtctggcaggtccag
ctggaagtgttcgagccggtggccaatcccagcatccggatcctccatcaggagttgtcc
aatggcagctgctccctcaccctcctctgcacctcggagcggggggatgaggtttcctac
agctgggacagccgggacaacgggacctgggagatctgctccgggaacggcagcttcctg
aacctctcctattccctgtggagcgcgggcttcggatgcgtctgcaccgccaggaatccc
gtgagcagccgggatgtggccttcgactcttcccagtgtggctctgagcagcccggtgac
cccgggctgaggacggagctcctcgtgctgctggcggggctcggtgccgtcgtcatcgtc
atcgtggtcatggtcgccttcagggccacccacttggccaaacgtgaccaggacccctcc
tggccagtcccggacctctcccaggtcactccggccagcaccagccccaccatctacgcc
caggtgcagagggtgcagaagcccaaagggaccgtccccaacgccacctcctcctcctgc
gccaccatctacaccgtggccaccgggccacccccggcccccgacggagccccctggtcc
ccggcagggtccccaaccccgcagggacaccccccgctgtcccaggagcccacgacagtt
tatgccagcgtgactcttcctgtggcctga
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