Aphelocoma coerulescens (scrub jay): 138098680
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Entry
138098680 CDS
T10543
Symbol
SEMA6C
Name
(RefSeq) semaphorin-6C isoform X1
KO
K06842
semaphorin 6
Organism
acoe Aphelocoma coerulescens (scrub jay)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
138098680
NCBI-ProteinID:
XP_068851490
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All DBs
Position
25:1898520..1905089
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AA seq
835 aa
AA seq
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MPGVPLPFVLLLLLLAGVPAQSFPRDLVARSTVGLTATAAYPRFGGLRGDNGTARLGLDF
QRMLRLNGTLFVAARDHIYAFELGQDEGTLYPERDECHNYIRVLVPRDAETLLACGTNAF
SPLCRTYQVSSLARQGDEVSGQARCPFDAKQSIVALFVDGSLYSATVADFQASDAVIYRS
LSPGRAPLRTLKYSSRWLQEPHFVQVLPYGPYVYFFFREVAVELSALGKVLVARVARVCR
NDRGGSPRVLERRWTSFLKVRLQCSVPGDTVFYFDVLEAVTPPQTLHGRPAVLALFGTQP
NSIPGSAVCAFYLADVERSFEGPFAEPRGATWTPVPEDKVPQPRPGCCAGMGPAAGVVTS
GDFPDETLVFAKEHPLLHGAVGPAGGRPLFTRTGTRLTQLAVDTGAGPRGNQTVLFLGAE
DGRVLKVLAAAQRPETTQTPGGTPAPGDTRELGDSGAKTLLLEEISLYDPGRCRGPRGTG
VPSRVLGLELHLPGRELLVAFAGCLVRLPLSRCAHHGSCRGSCLAARDPYCVWLPSKGCV
PFSEDLPSGFQQDVEGSLGISGSCQGPAAVGDGDEDGDMVHEVRHPGPGSAATVPVPVLV
GCVLGAFVLGALATGLVAICCQRPAVPKTPPEPPCAPRTPAQPPVPRLYPALPPCPEPPE
PPCPEPPALPPARAPRELRRGHSVPLGPAGCPEPPGPGPPAKASLEELLQRLHGSSGGSG
WPVTPPGTGSFANRVQPRAAGPGPLFAPHDRAPVRLDVPPDSPPAPRRPLAQSHSLGGTP
VSPPGPPRGLTRMHSLGTPGGTPWAPRPGTLERSLSMKPPTLPKPLLLPAAPGRP
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgccgggggtcccgctgcccttcgtcctcctcctcctcctcctggccggggtgcccgcc
cagtccttcccgcgggacctggtggctcgcagcaccgtggggctgacagccaccgccgcc
tacccgcgcttcgggggtctccggggggacaacggcacggcccggctcggcctcgacttc
cagcggatgctgcggctcaacgggacgctcttcgtggctgcccgggaccacatctacgcc
ttcgagctggggcaggacgaggggacgctgtacccggagcgggacgagtgtcacaactac
atccgggtgctggtgccccgcgacgccgagaccctcctggcctgtggcaccaacgccttc
agccccctgtgccgcacctaccaggtgagcagcctggcacggcagggtgacgaggtcagt
ggccaggcccggtgccccttcgatgccaagcaaagcatcgtcgccctctttgtcgatggt
agcctgtactcggccacggtggccgatttccaggcgagtgatgccgtgatctaccgcagc
ctgagccccgggcgggcccccctgcgcaccctcaaatacagctcccgctggctgcaggag
ccccactttgtccaggtgctgccctacggcccctacgtctacttcttcttcagggaggtg
gcagtggagctcagcgccctgggaaaggtgttggtggcgcgggtggcacgcgtgtgccgc
aatgaccgcggcgggtccccgcgggtgctggagcggcgctggacgtccttcctgaaggtg
cggctgcagtgctccgtccctggggacaccgtcttctacttcgatgtcctggaggccgtg
acacccccccagaccctgcacgggcgccccgctgtgctcgccctctttggcacccaaccc
aacagcatccccggctcggccgtctgcgccttctacctggcagatgtggagcgctccttc
gagggtcccttcgctgagcctcgaggggccacctggaccccagtgcccgaggacaaggtc
cctcagcccaggccgggctgttgtgccgggatgggacctgctgccggtgttgtcacctct
ggggacttccctgacgagacgctggtgttcgccaaggagcacccgctgctgcacggcgcc
gtgggccccgcgggcgggcggcccctcttcacccgcaccggcaccaggctgacccagctg
gccgtggacacgggcgcggggccccgcgggaaccagaccgtgctgttcctgggcgccgag
gacgggcgggtgctgaaggtcctggcagctgcacaacgccccgagaccacccagacccct
gggggcaccccagcaccgggggacacccgagagctgggggacagcggtgccaagacactg
ctgctggaggagatcagcctctacgaccccgggcggtgccggggcccgcgggggaccggg
gtccccagccgggtgctggggctggagctgcacctgccgggccgggagctcctcgtggcc
ttcgccgggtgcctggtgcggctgcccctgagccgctgtgcccaccacggctcctgccga
gggagctgcctggctgcccgggacccctattgtgtctggctgccctccaagggctgcgtc
cccttctccgaggaccttccgagcggcttccagcaggacgtggagggatccctcgggatc
agtgggagctgccaagggccagcggctgtaggggatggcgacgaggatggggatatggtc
cacgaggtgcggcatcccgggccggggtccgcagcgacggtgccggtgccggtgctcgtg
ggctgcgtgctgggcgccttcgtcctgggggccttggccaccgggctggtggccatctgc
tgccagcgccccgccgtgcccaagacccctccggagccaccctgcgccccgcggaccccg
gcccagccgcccgtcccccgcctgtaccccgcgctgccgccctgcccggagccccccgag
ccgccctgccccgagccccccgcgctgccccccgcccgggcaccccgggagctccggcgc
ggccactccgtcccgctgggccccgcgggctgcccggagccccccgggccgggacccccg
gccaaagcctccctggaggagctgctgcagcggctacacgggagctcggggggctcgggg
tggcccgtgacccccccgggcaccgggtccttcgccaaccgggtgcagcctcgcgccgcg
gggcccgggccactcttcgccccccacgaccgagccccggtgcgcctggacgtgcccccc
gatagccccccggccccgcggcggccgctggcacagagccactcgctgggggggaccccc
gtgagtccccccgggccgccgcggggcctcacccgcatgcactcgctggggacaccgggg
gggacaccctgggcaccccggcccggcaccctggagcgctccctgtccatgaagcccccc
acgctccccaagccgctgctgctgcccgcggccccggggcggccctga
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