Aphelocoma coerulescens (scrub jay): 138098697
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Entry
138098697 CDS
T10543
Symbol
DENND4B
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138098697 (DENND4B)
Membrane trafficking [BR:
acoe04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
138098697 (DENND4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
138098697
NCBI-ProteinID:
XP_068851522
LinkDB
All DBs
Position
25:complement(1814264..1830884)
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AA seq
1463 aa
AA seq
DB search
MSDEKPPQLVDYFVVAGLAEASRALEEEQQPRPARPGEPITDVAVIIRSQGEEVPQGFTC
IETTTSGHPVDLNAGLLNNPQMFLCYKRGRDKPPLIELGVHYEGKDRPKPGYQILDTTPY
SRSANLASGSPGHQRTFLTFRRAAEPPGHHTLGVTDICLVMPSKGESTPHTFCRVDKNLN
TSMWGPALFLCYKIAVAKGNTLVYEAGLLSRYPEQDSESFPLPESVPVFCLPMGATIESW
PAGTKYPLPVFSTFVLTGASGDKVYGAAIQFHEAFPRERLSEAQALRLGLLSVVDRRPVP
GRSLHTRKSICVLSHWPFFDVFRKFLMFIYRYSISGPHVLPLETHISHFMHNVPFPSPQR
PRILVQMSPYDSLLLCRPVSSPLPLSGASFLTLLQNLGPDNAVALLVAVLTEQKLLIHSL
RPDVLTSVGEALVAMIFPLRWQCPYIPLCPLALADVLCAPVPFIVGIHSSYFDLYEPPRD
VIFVDLDTNTIFQSEERKLLSPRVLPRRPCKVLLASLHSLSQQLDELLSAPGEEEPPELV
LSDAEAAGARRAQLELEARAAFLRFMACALRGYRSFLRPIAPAPAPAGRDAGSLFALQGF
LRSRERAYQRFYGQLLRTQLFTQFIEDCSFASDREPCLEFFDTCVDKVRPCVPSACPRRA
PGDPIAPLQVQVDLEKPEDTPLMELDDPRGGEHTVFITPPEQPAGPDGAEPPARYRYDGF
PTLRPELLEPPRDPLVAQLCQARSSAPSSPAPRRTKQEMKVAQRVAQKSSAVPELWARCL
LGHCYGLWFLYLPTHVRAAPAKLRALQLAYDVLRKMEQHKVVLPDEVCYRILMQLCGQYG
EPVLSVRVLLEMKRAGIVPNTVTYGYYNKAVLESKWPAGTQGGRLRWAKLRNVVLGAAQF
RQPLRQRERRSAAGDPPGDQPPPAPRPPLQRQTTWAGRSLRDPAPTPRLVKSGSLSFPRG
EGGTRMGPGEPPLLPVTPPLPPPRPRVPPGSADGSLSDIATDESGGDEGPAGGPGGGPGG
VTPRRGLAAKLQQLLSPGKRPPPRPTEPPREPGARRGSEQRDGDPTSRRSPAETLLRPRE
RPESTASESSVSLGSELDLSDASGGSTGGPKSTEPCSDGTAGTEPPALEVLLSSCSRCPG
CAGLVFDEELMAGWTSDDSNLNTSCPFCCRSFVPFLSIEIRDFRRPPSPPRAGPVPPSPE
GPVLSDRRRCLELDETPELCNGCADTPPPGRWERVAFAYLSPLVLRKELESLVENEGGEL
LARPELVDSHPIIFWNLVWYFQRLALPSNLPLLLLGSQHAPRDPQPPEPSRVRVRLLWDV
LSPDPESCPPLYVLWRLHSNIPPRLHPWGPPPAPFSLTFLEALLSHVGLNEVHKAIGLFL
ETLAAPGAPRTLHRSIYRELLFLTLAALGREHTDIAAFDRRYCSALGKLGGALGRDELRR
RRAQPPSAKASDCRRTFGAPPEC
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgagaagcccccccagctcgtggattacttcgtggtggccgggctggcggag
gcgtcgcgggcgctggaggaggagcagcagccgcggccggcgcggcccggggagcccatc
acggacgtggccgtgatcatccgctcgcagggcgaggaggtgccgcagggcttcacctgc
atcgagaccaccacgtcgggccaccccgtggacctcaacgcggggctgctcaacaacccc
cagatgttcctgtgctacaaacgcgggcgggacaaaccccccctgatcgagctgggggtg
cactatgagggcaaggaccgcccgaagccgggctaccagatcctggacacgaccccctac
agccgctcggccaacctggcctcggggtccccgggccaccagcgcacgttcctgacgttc
cggcgcgcggccgagccccccggccaccacacgctgggggtcaccgacatctgcctggtg
atgcccagcaagggcgagagcaccccccacaccttctgccgcgtggacaagaacctcaac
accagcatgtggggccccgcgttgttcctgtgctacaagatcgccgtggccaagggcaac
acgctggtctacgaggcagggctgctgagccgctaccccgagcaggacagcgagtccttc
cctctgcccgagtcggtgcccgtgttctgcctgcccatgggggccaccatcgagagctgg
cccgcgggcaccaagtaccccctgcccgtcttctccaccttcgtcctcaccggcgcctcg
ggggacaaggtctacggcgccgccatccagttccacgaggcgttcccgcgggagcggctg
tcggaggcgcaggcgctgcgcctggggctgctcagcgtggtggaccggcggccggtgccc
gggcgatccctgcacacccgcaagagcatctgcgtcctgtcccactggcccttcttcgac
gtcttccgcaagttcctcatgttcatctaccgctactccatctcgggcccccacgtgctg
cccctggagacgcacatctcccacttcatgcacaacgtgcccttcccgtccccgcagcgc
ccgcggatcctggtgcagatgtccccgtatgacagcctgctgctctgccggcccgtgtcc
tccccgctgccgctcagcggggccagtttcctgacgctgctgcagaacctgggccccgac
aacgccgtggcgctgctggtggccgtcctgaccgagcagaagctgctcatccactccctg
cggcccgatgtgctgaccagcgtgggagaagccctggtggcgatgatcttccccctgcgc
tggcagtgcccctacatcccgctgtgcccgctggcgctggctgacgtgctgtgtgccccc
gtgcccttcattgtaggcatccactccagctacttcgacctctacgagcccccccgcgac
gtcatcttcgtcgacctggacaccaacaccattttccagagcgaggagcggaagctgctg
tcgccccgcgtgctgccccgccggccctgcaaggtgctgctggcctcgctgcacagcctg
tcccagcagctggacgagctgctgagcgcgccgggcgaggaggagccgccggagctggtg
ctgagcgacgcggaggccgcgggcgcgcgccgggcgcagctggagctggaggcgcgggcg
gccttcctgcgcttcatggcctgcgccctgcgcgggtaccgctccttcctgcgccccatc
gcgcccgcgcccgccccggccggccgcgacgccgggagcctcttcgcgctgcaggggttc
ctgcgctcccgggagcgggcgtaccagcgcttctacgggcagctgctgcgcacgcagctc
ttcacgcagttcatcgaggactgctccttcgccagcgaccgcgagccctgcctcgagttc
ttcgacacctgcgtggacaaggtgcgtccctgcgtcccctccgcgtgtccccgccgtgct
cccggtgaccccatcgcccctctgcaggtgcaggtggacctggagaagcccgaggacacg
cccctgatggagctggatgacccccggggcggggagcacacggtgttcatcacccccccg
gagcagccggcggggccggacggggctgaaccccctgcccggtacaggtatgatgggttc
cccacgctgcgcccggagctgctggagcctccccgggacccgctggtggcacagctgtgc
caggcccggagcagcgccccgagcagccccgccccacggcgcaccaagcaggagatgaag
gtggcccagcgggtggcccagaagtcgtcggcggtgcccgagctgtgggcacggtgcctg
ctggggcactgctacgggctctggttcctgtacctgcccacccacgtgcgcgccgccccc
gccaagctccgcgcgctgcagctcgcctacgacgtcctgcgcaagatggagcagcacaag
gtggtgctgcccgacgaggtgtgttaccgcatcctgatgcagctctgcgggcagtacggg
gagcccgtgctgtccgtgcgcgtcctgctcgagatgaaacgcgccggcatcgtccccaac
accgtcacctacggctactacaacaaggcggtgctggagagcaagtggccggcggggact
cagggggggcggctgcgctgggccaagctccggaatgtggtgctgggggcggcgcagttc
cggcagcccctgcggcagcgggaacgccggagcgccgccggagaccccccgggtgaccag
cctcccccggccccccgcccccccctgcagcgccagaccacctgggcgggccggagcctg
cgggacccggccccgaccccgcggctggtcaagagcggcagcctcagtttcccccggggc
gagggggggacgcggatggggccgggggagccccccttactccccgtgacgccccccctg
ccgcccccccgcccgcgggtcccccccggctcggccgacgggagcctctcggacatcgcc
acggacgagagcggcggggacgaggggccggccgggggtcccggggggggtcccgggggg
gtgaccccacgccgggggctggcggccaagctgcagcagctgctgtcccccgggaagcgg
ccccccccgcgccccacagagcccccccgggagcccggggcgcgccggggctcggagcag
cgggatggggaccccacctcacgccgcagccccgccgagaccctgctgcggccccgggag
cgccccgagtccacggcctcagagagctccgtgtccctgggcagcgaactggacctgtcc
gatgcctcggggggcagcaccgggggccccaaatccacggagccctgctcggatgggaca
gcggggacagagccccccgccctggaggtgctgctgtccagctgctcgcgctgcccgggc
tgtgccgggctcgtgttcgacgaggagctcatggccggctggacctcggacgattccaac
ctcaacacctcctgccccttctgctgccgctccttcgtgcccttcctgagcatcgagatc
cgcgacttccgacggccccccagcccccccagggccggcccggtgcccccctccccagag
gggccggtgctcagcgaccgccggcgctgcctcgagctggacgagacccccgagctgtgc
aacggctgcgccgacaccccgcccccggggcgctgggagcgcgtggccttcgcctacctg
agcccgctggtgctgcgcaaggagctggagagcctggtggagaacgagggcggggagctg
ctggcgcgccccgagctcgtggacagccaccccatcatcttctggaacctcgtgtggtac
ttccagcgcctggccctgcccagcaacctccccctgctgctgctgggctcccagcacgcg
ccccgcgacccccagccccccgagccctcccgtgtccgtgtgcggctcctgtgggatgtg
ctgagccccgaccccgagagctgccccccactctacgtgctctggaggctgcacagtaac
atccccccgcggctgcacccctggggccccccgcccgccccgttctcgctgaccttcctc
gaggccctgctgagccacgtggggctcaacgaggtccacaaagccatcgggctcttcctg
gagaccctcgcggcgcccggagccccccggaccctgcacaggagcatctaccgggagctg
ctgttcctgacgctggcagcgctgggccgggagcacacggacatcgccgccttcgaccgc
cggtactgctcggcgctggggaagctcgggggggccctgggccgggacgagctgcggagg
cgccgggcgcagccccccagcgccaaagcctccgactgccgccgcaccttcggggccccc
cccgagtgctga
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