Aphelocoma coerulescens (scrub jay): 138098827
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Entry
138098827 CDS
T10543
Name
(RefSeq) tubulin alpha-1C chain-like isoform X1
KO
K07374
tubulin alpha
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04145
Phagosome
acoe04210
Apoptosis
acoe04530
Tight junction
acoe04540
Gap junction
acoe04814
Motor proteins
acoe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
138098827
09143 Cell growth and death
04210 Apoptosis
138098827
09144 Cellular community - eukaryotes
04530 Tight junction
138098827
04540 Gap junction
138098827
09142 Cell motility
04814 Motor proteins
138098827
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138098827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138098827
03036 Chromosome and associated proteins [BR:
acoe03036
]
138098827
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
acoe04812
]
138098827
04147 Exosome [BR:
acoe04147
]
138098827
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138098827
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
138098827
Cytoskeleton proteins [BR:
acoe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
138098827
Exosome [BR:
acoe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
138098827
Exosomal proteins of other body fluids (saliva and urine)
138098827
Exosomal proteins of colorectal cancer cells
138098827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
138098827
NCBI-ProteinID:
XP_068851774
LinkDB
All DBs
Position
26:complement(2438400..2450420)
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGNMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPAVIDEVRNGTYRQLFHPEQLISGKEDAANNYARGHYTVGKEIIDLVLE
RIRKLSDQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYSPIISAEKAYHEQLSVSEITNACFEPSN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGTDSMDGEDEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagtgcatctctgtgcacgtggggcaggcgggcgtgcagatcggcaatgcctgc
tgggagctgtactgcctggagcacggcatccagcccgacggcaacatgcccagcgacaag
accatcggcggcggggacgactccttcaacaccttcttcagcgagacgggcgcagggaag
cacgtcccgcgggctgtgtttgtggaccttgaacccgcggtcatagatgaagttaggaat
gggacataccggcagctctttcatcctgagcaactgatatctggtaaagaagatgctgca
aataactatgctcgaggtcactacacagttgggaaagagataattgatctagttttagag
cgtatcaggaagctgtcagatcagtgcactggcttgcagggcttcctgattttccacagc
tttgggggaggcactggatctggtttcacctctctgctgatggagcgcctctcagttgac
tatgggaaaaaatccaagctggaatttgccatctaccctgcgcctcaggtctcgacagct
gttgtggagccctacaactccatcctgaccacccacaccacgctggagcactctgactgt
gccttcatggttgacaatgaggccatctatgacatttgccgtaggaacctggacattgaa
cgccccacctacaccaacctcaatcgcctcattggtcagatagtatcttccattactgct
tccctcaggttcgacggtgccttaaacgtggatcttactgaattccagactaacctggtg
ccttaccctcggatccacttcccgctggtgacgtactccccgattatttcggcagagaag
gcctaccatgagcagctctccgtgtctgagatcaccaacgcctgcttcgagccctccaac
cagatggtgaagtgtgacccgcggcacggcaagtacatggcgtgctgcatgctgtaccgc
ggcgacgtggtgcccaaggacgtcaacgccgccatcgccgccatcaagaccaagcgtagc
atccagtttgtggactggtgtcctactggatttaaggttggcatcaattaccagcctccc
acagtggttcctgggggcgacctggccaaagtccagcgggcagtctgcatgctgagcaat
accacggccattgccgaggcctgggctcgcctggaccacaagtttgacctgatgtatgcc
aaacgtgcctttgttcactggtatgttggagaagggatggaggagggggagttctcagag
gctcgggaagatttggctgcgcttgagaaagattatgaagaagtgggcacagactcaatg
gatggagaagatgaaggtgaagaatattaa
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