Aphelocoma coerulescens (scrub jay): 138098879
Help
Entry
138098879 CDS
T10543
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoe04121
]
138098879
Enzymes [BR:
acoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138098879
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138098879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_2
zf-C3HC4
zf-CCCH_PARP12
zf-RING_2
zf-RING_5
zf-rbx1
zf-RING_UBOX
IBR_1
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
138098879
NCBI-ProteinID:
XP_068851868
LinkDB
All DBs
Position
26:complement(4417778..4421093)
Genome browser
AA seq
371 aa
AA seq
DB search
MEPGSMMASGPLGAGGSCLRPLCRNFARGSCRWGQSCRFSHDRKSAQVCRYFQRGFCRYG
EQCSYQHVQEEPAPVGTQYGLVPHHHWGLEPDTEPTAMERDQRGAQYTSVHPAHSVTRVA
FKFPKVGVEVEEKDKKNIPALGFQPQGPALDPDSSDPREAVVETATWTDPAKVPAEPALV
TTAALRAQSEAVVCGICMDRVYEKPLPEEQFFGILPNCSHAYCVGCIRKWRRSRDFQSTV
IKACPECRITSSYYIPHKYWISDVGEKEKLIRTFKARTGKIRCKFFIRGHCPFRSECIYL
HELPARRLLRHRRQRPRMPAVFIPSSSESSDEEDEEFCTLEWALTLAMLETEFHYSNSGH
EMLLIDFSDSD
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggagccaggctcgatgatggcatctgggccgttaggggccgggggaagctgcctgaga
cccctgtgcaggaattttgcccgtggatcctgtcggtggggccagagctgccgcttctca
catgacagaaaatcagcccaggtgtgcaggtacttccagcgtgggttttgccgttacgga
gagcagtgcagctatcagcatgtccaggaggagccagcaccagtagggacacagtatggt
ctggtgccccaccaccactggggcctggagcctgacactgagcccacagccatggagcgg
gaccagcgaggagcccagtacacctcggtccaccctgcccacagcgtgacacgtgtggcc
ttcaaattcccaaaagtgggggttgaagtggaagagaaagacaagaagaacatcccagca
cttggcttccaaccacaagggccagcactggatccagactcctctgaccccagagaggca
gttgtggagacggcaacatggactgaccctgcaaaggtccctgcagagccagccctggtc
accaccgcagcactgagagcccagagcgaggccgtggtgtgtggcatctgcatggacagg
gtgtatgagaagccgctgccagaggagcagttcttcgggatcctcccgaactgcagccac
gcgtactgcgtggggtgcatccgcaagtggcggcgcagccgggacttccaaagcacggtc
ataaaagcctgcccagagtgccggatcacctccagttactacatcccccacaaatactgg
atctcagacgtgggtgagaaggagaagctcatcagaaccttcaaggcacggacagggaaa
atcaggtgcaaattcttcatccgtggccactgccctttcagatcagagtgcatctacctg
cacgagctgcctgcccgccggctgctgcggcacaggcggcagcggccgaggatgcccgct
gtgttcatcccttcttcctctgagagctctgatgaggaggatgaagagttctgcacactc
gagtgggcccttaccctggccatgctggagacagaatttcactactccaattctggccac
gagatgcttctcattgacttcagcgattccgactga
DBGET
integrated database retrieval system
