KEGG   Aphelocoma coerulescens (scrub jay): 138099201
Entry
138099201         CDS       T10543                                 
Symbol
RAB5C
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe04137  Mitophagy - animal
acoe04144  Endocytosis
acoe04145  Phagosome
acoe04148  Efferocytosis
acoe05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    138099201 (RAB5C)
   04145 Phagosome
    138099201 (RAB5C)
   04137 Mitophagy - animal
    138099201 (RAB5C)
   04148 Efferocytosis
    138099201 (RAB5C)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    138099201 (RAB5C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:acoe04131]
    138099201 (RAB5C)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:acoe04147]
    138099201 (RAB5C)
   04031 GTP-binding proteins [BR:acoe04031]
    138099201 (RAB5C)
Membrane trafficking [BR:acoe04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    138099201 (RAB5C)
 Endosome - Lysosome transport
    138099201 (RAB5C)
Exosome [BR:acoe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   138099201 (RAB5C)
  Exosomal proteins of other body fluids (saliva and urine)
   138099201 (RAB5C)
  Exosomal proteins of colorectal cancer cells
   138099201 (RAB5C)
  Exosomal proteins of bladder cancer cells
   138099201 (RAB5C)
GTP-binding proteins [BR:acoe04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    138099201 (RAB5C)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 138099201
NCBI-ProteinID: XP_068852413
LinkDB
Position
27:complement(3109484..3121613)
AA seq 216 aa
MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQ
RQASPNIVIALAGNKADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQNAPGGPGRNRVVDLQESSQPSRSQCCSN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggtggagctgcccgaccgaatggaccagctgctgggaacaaaatctgc
cagtttaaacttgttctcttgggcgagtcagcggtggggaagtccagcctggtcctgcgc
tttgtgaaggggcagttccacgagtaccaggagagcacgattggagctgccttcctaaca
cagacagtgtgtctggatgacacaacagtgaagtttgagatctgggacacggcggggcag
gagcggtaccacagcctggcccccatgtactaccggggggctcaggcagccatcgtggtc
tacgacatcacgaacacagacacatttgtacgagccaagaactgggtgaaagagttgcag
aggcaggctagccccaatattgtaattgcactagcaggaaacaaggcagaccttgctacc
aagagagctgtggacttccaggatgcacaaacatatgcagatgacaacagcttgctgttc
atggagacgtcggcgaagacagcgatgaatgtgaatgaaatcttcatggcaatagccaag
aaactgccaaaaaatgaaccccagaatgctcctggtggcccaggcaggaatcgggtggtg
gaccttcaggagagcagccagccgagcagaagccagtgctgcagcaactga

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