Aphelocoma coerulescens (scrub jay): 138099201
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Entry
138099201 CDS
T10543
Symbol
RAB5C
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04137
Mitophagy - animal
acoe04144
Endocytosis
acoe04145
Phagosome
acoe04148
Efferocytosis
acoe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138099201 (RAB5C)
04145 Phagosome
138099201 (RAB5C)
04137 Mitophagy - animal
138099201 (RAB5C)
04148 Efferocytosis
138099201 (RAB5C)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138099201 (RAB5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138099201 (RAB5C)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acoe04147
]
138099201 (RAB5C)
04031 GTP-binding proteins [BR:
acoe04031
]
138099201 (RAB5C)
Membrane trafficking [BR:
acoe04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
138099201 (RAB5C)
Endosome - Lysosome transport
138099201 (RAB5C)
Exosome [BR:
acoe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
138099201 (RAB5C)
Exosomal proteins of other body fluids (saliva and urine)
138099201 (RAB5C)
Exosomal proteins of colorectal cancer cells
138099201 (RAB5C)
Exosomal proteins of bladder cancer cells
138099201 (RAB5C)
GTP-binding proteins [BR:
acoe04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
138099201 (RAB5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
138099201
NCBI-ProteinID:
XP_068852413
LinkDB
All DBs
Position
27:complement(3109484..3121613)
Genome browser
AA seq
216 aa
AA seq
DB search
MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQ
RQASPNIVIALAGNKADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQNAPGGPGRNRVVDLQESSQPSRSQCCSN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaggtggagctgcccgaccgaatggaccagctgctgggaacaaaatctgc
cagtttaaacttgttctcttgggcgagtcagcggtggggaagtccagcctggtcctgcgc
tttgtgaaggggcagttccacgagtaccaggagagcacgattggagctgccttcctaaca
cagacagtgtgtctggatgacacaacagtgaagtttgagatctgggacacggcggggcag
gagcggtaccacagcctggcccccatgtactaccggggggctcaggcagccatcgtggtc
tacgacatcacgaacacagacacatttgtacgagccaagaactgggtgaaagagttgcag
aggcaggctagccccaatattgtaattgcactagcaggaaacaaggcagaccttgctacc
aagagagctgtggacttccaggatgcacaaacatatgcagatgacaacagcttgctgttc
atggagacgtcggcgaagacagcgatgaatgtgaatgaaatcttcatggcaatagccaag
aaactgccaaaaaatgaaccccagaatgctcctggtggcccaggcaggaatcgggtggtg
gaccttcaggagagcagccagccgagcagaagccagtgctgcagcaactga
DBGET
integrated database retrieval system