Aphelocoma coerulescens (scrub jay): 138099431
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Entry
138099431 CDS
T10543
Symbol
MED1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1 isoform X1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoe03021
]
138099431 (MED1)
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
138099431 (MED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
138099431
NCBI-ProteinID:
XP_068852741
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All DBs
Position
27:complement(2254900..2272040)
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AA seq
1582 aa
AA seq
DB search
MKAAPGSAEEAEKLNKMSSLLERLHAKYSQNRPWTETMKLVRQVMEKRVVLNSGGHQHLV
SCLETLQKALKVSSLPAMTDRLESIARQSGLGSHLSANGTECYITSDMFYVEVQLDPTGL
LCDVKVAHHGENPVSCPELVQHLREKNFDEFSKHLRGLVNLYKLPGDNKLKTKMYLALQS
LELDLQKMAGMYWQATNANPLDKILHGSVGYLTPRSGGLLMNLKYYVSPYDLFEDGTGAP
VVLHENNVPRSLGMNVSVTVEGTMAMHKLPIAPLIMGSHPVDSKGTPSFSSITSANSVDL
PACFFLKFPRPIPVSRAFIQKLQSCTGIPLFDTSPTFVPLYELITQFELSKEADPLPLNH
NMRFYAALPGQQHCYFLNKDAPLPDGRSLQGTLISKIAFQHPGRVPLILNLIRHQVAYNT
LIGSCVKRTVLKEDSPGILQFEVCPLSDSCFSVSFQHPVNDSLVCVVMDVQDSTHVNCKL
YKGLSDALICTDDFIAKVVQRCMSIPVTMRAIRRKAETIQADTPALSLIAETVEDMVKKN
LPPASSPGYGMTTGSNPMSGTTTPTNTFPGGPITTLFNMSISMKERHDSVGHGEDFSKVS
QNPILTSLLQITGNVGSTIGSSPTPPHHTPPPVSSPASNTKNHPMLMNLLKENPPQDFST
LYGSSPLERQNSSSGSPRMEMGPGGNKQKKKKSRMPADKPKHQTEDDFQRELFSMDVDSQ
NPIFDVNMTADTLDTPHITPAPSQCSTPPTTYPQALPHAQPSIQRMVRLSSSDSIGADVT
DILSDIAEEASKLPTSTEDCPPIGTPVRDSSSSGHSQSALFDPDVFQTNSSENPYTDPAD
LIADAAVSPNSDSSNHFFPDGVDFNPDLLNSQSQSGFGEEYFDESSQSGDTDDFKGYAPQ
ALTNLGVQVLGADGGENKFKGSTPSDTVDFSIIAAASKALGSSDIMEHHSGGQSPLLNTG
DLGKEKSQKRVKEGNGSGSAMAGAGIDGKPGKRSRTPSSDGKSKEKLPKRKKQETDGKSP
SHSSSNRPFTPPASTGGSKSPGSSGRSQTPPGVATPPIPKITIQIPKGTVTVGKPSSHGQ
YTSSGSVTSSSSKSHHSHSSSSSSSSSSSTSGKIKSKSEGSSGSKMSSSLYSSQGGSGSG
QSKGSAQSVGKPGSSPITKHGLSTGSGSTKMKPQGKPSSLMNPSISKPNISPSHSRPSGG
SDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTGSSSSMKSSSGMGSSGSMSQKPPP
SSNSSTASSSSFSSSGSSMSSSQNQHGSSKGKSPSRNKKPSLTAVIDKLKHGVVTSGPGG
DDPMDGQMGPSSNSSSHTMSSKHNMSGGEFQGKREKSDKEKSKVSVSGGSVDSSKKNSDS
KNVGSTGVAKIIISKHDGGSPSIKAKVTLQKPGEGGGDGLRPQMASSKSYGSPLISGSTP
KHERCSPSHSKSPAYTPQNIDSESESGSSIAEKSYQNSPSSDDGIRPLPEYSAEKHKKHK
KEKKKVKDKDRDRDRDRDKDRDKKKSHGMKPESWSKSPISADQSLSMASSAILSAERPSR
ASPEFLIGEEDDDLMDVALIGN
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagcgccgggcagcgccgaggaggcggaaaagctgaacaagatgagctccctc
ctggaaaggctccacgccaagtacagccagaaccggccctggacagaaaccatgaagttg
gtccgtcaggtcatggaaaagcgagtggtgctgaactcagggggacaccaacacctggtg
agctgcttggagacgctgcagaaggccctgaaagtgtcatctctgcctgccatgactgat
cgcttggagtccatcgccaggcaaagcggcctcggctcccacctgagtgcgaacggcacc
gagtgttacatcacctcggacatgttttatgtggaagtgcagttggatcctacagggctg
ctctgtgatgtcaaggtggctcaccatggagaaaaccccgtgagctgtccagaactggtg
caacatctgagagagaaaaattttgatgagttttcaaagcatctgaggggacttgtgaac
ttgtataagctgccaggggacaacaaacttaaaactaaaatgtacttggctctgcagtcc
ttggagttggatctccaaaagatggctgggatgtattggcaagccaccaatgcaaacccc
ctggacaagatcctgcatggcagtgttggctatctcacccccaggagtggaggtctcctg
atgaacctcaaatattacgtctccccctatgatttatttgaggatggcactggagcccct
gtggttttgcacgagaacaatgttcctcgctcgctgggcatgaacgtgtccgtgacagtc
gagggaaccatggcaatgcacaaacttccaattgctcccctgatcatgggctcccaccct
gtggacagcaaaggaactccgtctttctcctcgatcaccagtgccaacagcgtggacttg
ccagcttgtttcttcctgaaattcccacgtcccattccagtgtctcgagctttcatccag
aaactccagagctgcacaggtatcccactgtttgacacgtcacccacgtttgtccctctg
tatgagctgatcacgcagtttgagttgtccaaggaggccgatcccctgcccctgaaccac
aacatgcgcttctatgcagctcttccaggacagcagcactgttacttcctgaacaaagac
gctcctctcccggatggacgaagcctccagggaactctgatcagcaaaatcgccttccag
caccccggccgggtgcccctcatcctcaacttgatccggcaccaggtggcctacaacacc
ctcatcggcagctgtgtcaagaggacagtcctgaaggaagattctcctgggatcctgcag
tttgaagtttgtcctctctctgactcctgtttcagtgtatccttccagcaccccgtgaac
gactccctggtgtgtgtggtgatggatgtgcaggactccacccatgtgaactgcaagctg
tacaaagggctgtccgatgccctcatctgtacagatgatttcattgccaaggttgttcaa
aggtgcatgtccatccctgtcaccatgagagccatccgtaggaaggcagaaaccattcaa
gctgacaccccagccctgtccctcattgcagagacagttgaagacatggtgaagaaaaac
ctgcccccagccagcagcccagggtatggcatgaccacaggcagcaacccaatgagtggg
accaccaccccaaccaacacttttcctggggggcccatcactactttgtttaacatgagc
ataagcatgaaagagaggcatgactcggtgggccatggggaggacttcagcaaagtgtct
cagaaccctattctcactagtttgttgcagatcacagggaatgtggggtctaccattggc
tcaagtccaacccccccccaccacacaccaccaccagtatcctcaccagccagcaacacc
aagaaccaccccatgctcatgaaccttcttaaggagaatcctcctcaggatttctccact
ctgtatgggagcagccctctggaaaggcagaactcttcctctggctcccccagaatggaa
atgggccctggggggaataagcaaaagaaaaaaaaatcccgcatgccagccgacaagccc
aagcaccagactgaggatgatttccagagggagctcttttccatggatgttgactcccag
aaccccatttttgatgtcaacatgactgcagacaccctggacacccctcatattactcca
gcacccagccagtgcagcactcctcctaccacctacccccaggcgctcccccatgcgcag
cccagtatccagaggatggttcgcctgtccagctcggacagcatcggggccgatgtcacc
gacatcctctcggatatagcagaggaggcttccaagctgcccaccagtaccgaggactgc
ccacccattgggactccagtcagagactcttctagttcaggacattcacaaagtgccctc
tttgaccccgatgtttttcagaccaacagtagtgagaacccctacacagaccccgcagac
ctgatcgcggacgccgctgtgagccccaacagcgactcctccaaccatttttttccagac
ggggtagatttcaaccctgacttgctgaacagccagagccagagcggttttggggaggaa
tactttgatgagagcagtcagagcggagacactgacgatttcaagggctatgccccccag
gctctaactaatttgggggtgcaagtcttgggggctgacgggggggaaaataaatttaag
gggagcactccgtccgatacggtggattttagtattattgcagctgccagcaaagcactg
gggtcctccgacatcatggagcaccacagtggaggtcagagccctttgctgaacacgggg
gatttaggaaaagagaagtctcagaaacgggtaaaggaaggcaatgggtctggaagtgcc
atggcaggtgccgggatagatgggaagccagggaagcgcagccggacgccatccagtgat
ggcaaaagcaaagagaaacttccaaagcggaagaagcaggagacagatgggaaatctcca
tctcacagttcgtccaacaggcccttcacgccaccagcaagcacaggtgggtccaagtct
ccggggagttcgggcagatcccagactcctcccggggtagctactcctcctattccaaaa
ataaccattcagatcccaaaaggaacagtgactgttggcaaaccgtcttcacacggccag
tacacgagtagtggttctgtcacctcctccagtagcaaaagccatcatagccattcttcc
tcctcctcctcttcttcctcctcttcaacctcaggcaaaattaaaagcaaatcagaaggg
tcttctggctcaaagatgagcagcagcctttactccagccaaggtggctccggttcgggt
cagtccaagggctcggcccagtcggtgggaaagccgggatcctcccccatcaccaagcac
ggcctcagcaccggctctggcagcaccaagatgaaacctcaaggaaagccatcgtccctc
atgaacccttccataagcaaaccaaacatctctccgtctcactcgagaccctcggggggt
tctgacaaactcgcctctcccatgaaacccgtcccaggtactcccccatcgtctaaagcg
aagtcacccatcagttcaggttccggtgggtctcacatgtctgggactggctcaagctcg
agcatgaaatcatcttcaggaatgggatcctccgggtctatgtcacagaaaccacccccc
tcgtccaattcctccacggcatcttcatcttccttttcatccagtgggtcttccatgtct
tcatcccagaaccagcatggaagctccaaaggcaagtccccgagcagaaacaagaagcca
tcgctgaccgcagtcatagacaagctgaagcacggggtggtcacgagcgggcctggcgga
gacgaccccatggatggacagatggggccgagttccaattcctcaagccatacaatgtcc
tccaaacacaacatgtctggaggggagttccagggaaagcgggagaagagcgacaaggag
aaatcgaaggtctctgtttctggaggatctgttgactcttccaagaagaactcggattcc
aaaaacgtcggaagcactggagtggccaaaattatcatcagcaaacacgatggtggttcc
cccagcattaaagccaaagtaactctgcagaaacccggggaagggggcggggacggcctg
aggcctcagatggcttcttccaaaagctacggatcccccctgatcagcggctccaccccc
aagcacgagcgctgctcccccagccacagcaagtccccggcgtacaccccccagaacatc
gacagcgagagcgagtcgggctcctccatcgccgagaaatcctaccagaacagccccagc
tccgacgacggcatccggcccctgcccgagtacagcgccgagaaacacaagaagcacaaa
aaggagaagaaaaaagtgaaagacaaagaccgggacagagatcgggaccgggataaggac
agggacaagaagaaatcccacggcatgaagccggagagctggtccaagtccccgatctcg
gcagatcagtctctgtccatggcgagcagcgccatcctctcggccgagcggccatccagg
gccagccccgagttcctgatcggggaagaggatgatgatctcatggatgttgctctaatt
ggcaattaa
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integrated database retrieval system
