KEGG   Aphelocoma coerulescens (scrub jay): 138099489
Entry
138099489         CDS       T10543                                 
Symbol
SMARCE1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
  KO
K11651  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    138099489 (SMARCE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acoe03021]
    138099489 (SMARCE1)
   03036 Chromosome and associated proteins [BR:acoe03036]
    138099489 (SMARCE1)
Transcription machinery [BR:acoe03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     138099489 (SMARCE1)
Chromosome and associated proteins [BR:acoe03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    138099489 (SMARCE1)
   PBAF complex
    138099489 (SMARCE1)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 GCN5L1 Sarcoglycan_2 Pepsin-I3
Other DBs
NCBI-GeneID: 138099489
NCBI-ProteinID: XP_068852858
LinkDB
Position
27:complement(2704418..2719998)
AA seq 412 aa
MSKRPSYAPPPTPAPATQMPSTPGFVGYNPYSHLAYNNYRLGGNPGTNSRVTASSGITIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYE
AEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPD
DYDDGFSMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEERHQEKKRKFLESTESFNNELKRLCSLKVEVDMEKIAAEIAQAEEQARKRQ
EEREKEAAEQAERSQNSLAAEEEQAASKGEEKKEEESTPMETEEPHPEESTENQQNGEEG
TSTPEDKESGQEGVDSTAEEGTSDSNTGSESNSATVEEPPADPIAEEGDKKE
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgtcaaaaaggccatcctatgccccacctcctaccccagctcctgcaacccaaatgccc
agcaccccagggtttgtgggatacaatccatacagccatctggcctacaacaactacagg
ctgggagggaacccgggcaccaacagccgggtcacggcttcctctggtattaccattcca
aagccccccaaacccccagacaagcccctgatgccctacatgaggtacagccggaaggtc
tgggaccaagtgaaggcgtccaatcctgatttgaagttatgggaaattggcaagattatt
ggaggaatgtggcgagatctcactgatgaagagaagcaagagtatttgaatgaatatgaa
gctgaaaagatcgagtacaacgagtccatgaaggcctaccacaactcccctgcctacctg
gcctacatcaacgccaagagccgcgccgaggcagcgctggaagaggagagccggcagcgg
cagtcgcgcatggagaagggggagccctacatgagcatccagcccgcagaggatcctgat
gattatgatgatgggttttccatgaagcacacggccacagctcggttccagaggaaccac
cggctcatcagtgagatcctgagcgagagcgtggtgcccgacgtccgctccgtggtcacc
acggccagaatgcaagtcctgaaacgccaggttcagtctttaatggttcatcagcgtaaa
ctcgaagctgagctgctgcaaattgaggagcgtcaccaggaaaagaagaggaagtttttg
gaaagcacagaatctttcaacaacgagcttaaaaggttgtgcagtttgaaagtggaagtg
gatatggaaaaaattgcagctgaaattgctcaagctgaggagcaggctcgcaagagacag
gaggaaagggaaaaggaagcagctgaacaagctgagcgcagtcagaacagcctggcagct
gaggaggagcaggcagccagcaagggggaggagaagaaggaagaggagagcactccaatg
gagacagaagagcctcacccggaagagagcacggagaaccagcagaacggtgaagaagga
acctccaccccagaggacaaggagagtgggcaggaaggggtggacagcacggccgaggag
ggaaccagcgacagcaacaccggctcagagagcaacagcgcgaccgtggaggagccgccc
gcagaccccatcgctgaggagggcgacaagaaagaataa

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