Aphelocoma coerulescens (scrub jay): 138099855
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Entry
138099855 CDS
T10543
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03018
RNA degradation
acoe03040
Spliceosome
Brite
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138099855
mRNA degradation factors
5'-3' decay
Lsm complex
138099855
Spliceosome [BR:
acoe03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
138099855
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
138099855
NCBI-ProteinID:
XP_068853531
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All DBs
Position
28:1385458..1390589
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AA seq
115 aa
AA seq
DB search
MASGGGGGGAGKMADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVL
DGTIEYMRDPDDQFKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggcggcggcggcggcggcgcggggaagatggcggataaggagaagaagaag
aaggagagcatcttggacctctccaagtacatcgacaagaccatccgggtgaagttccag
ggcgggcgggaagcaagtggtgtcttgaaaggatttgaccctcttctgaaccttgtgctg
gatggcaccattgagtatatgcgagatccagatgatcaattcaaattaacagaagacaca
cgtcagctgggacttgtggtttgcagagggacttctgtggttctgatttgtccacaggat
ggaatggaagctattccaaaccctttcattcagcagcaagatggctaa
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