Aphelocoma coerulescens (scrub jay): 138099909
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Entry
138099909 CDS
T10543
Symbol
ITGA5
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-5
KO
K06484
integrin alpha 5
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03266
Virion - Herpesvirus
acoe04145
Phagosome
acoe04510
Focal adhesion
acoe04512
ECM-receptor interaction
acoe04810
Regulation of actin cytoskeleton
acoe04820
Cytoskeleton in muscle cells
acoe05100
Bacterial invasion of epithelial cells
acoe05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
138099909 (ITGA5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138099909 (ITGA5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
138099909 (ITGA5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
138099909 (ITGA5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138099909 (ITGA5)
04810 Regulation of actin cytoskeleton
138099909 (ITGA5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
138099909 (ITGA5)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
138099909 (ITGA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acoe04147
]
138099909 (ITGA5)
04515 Cell adhesion molecules [BR:
acoe04515
]
138099909 (ITGA5)
04090 CD molecules [BR:
acoe04090
]
138099909 (ITGA5)
Exosome [BR:
acoe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
138099909 (ITGA5)
Cell adhesion molecules [BR:
acoe04515
]
Integrins
Integrin alpha subunits
138099909 (ITGA5)
CD molecules [BR:
acoe04090
]
Proteins
138099909 (ITGA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
138099909
NCBI-ProteinID:
XP_068853607
LinkDB
All DBs
Position
29:2983913..3002159
Genome browser
AA seq
1049 aa
AA seq
DB search
MAPAPAPPRRPRPRRRCRPRIPLPVPLPLLLPLLLPPVAAFNLEASRPVVFRGAPGSLFG
FALDFYLPEPRSVSILVGAPKANTSQPNVTQGGAVFHCPWPPGGDCTPIDFDHIGTRTHD
FGGNSSDAPEPVEFKSLQWFGATVRAHNGSILACAPLYSWSPPKEEGGAREPVGSCFLSI
GNFSKFVEYAPCRSDLNSAAGQGYCQGGFSAEFTQTGRVLLGGPGSYFWQGQVMSATQEQ
IAAGNFPEYLIQEVPGQLQTRQAAPSHDDSYMGYSVAVGEFSGDTTQDFVAGVPKGNLTY
GYVTILNGTNMRSLYNFSGEQMASYFGYAVAATDVNNDGLTDLLVGAPLFMARSGAGGAR
ELGRVYLYLQRGGAPPAPPAPLTGTHEFGRFGSAIAPLGDLDRDGFNDVAVGAPLGAEGR
RGLVFIFRGGGAGLRPRPAQVLRGLGGPRAQPDFFGAALRGATDLDGNGYPDLLVGAFGA
DAAVVYRGRPIVHASATLAIVPTMFNPEERGCVLAASGHHVPCINVTFCLNASGRHLPGP
IGLALELSVDGAKAGGARRALFLGGGPGGAPPSPTRNLSLEVPNGGTPRCRTLGVFLRNE
SEFRDKLSPIPVSLSLALDPAVSPPPPGLAPLLSPATRTRLEAKAHIQLDCGEDNVCVPD
LQLEASADRRAVFLGDRNSLNVTFHARNVGEGGAYEAELHVRPPPGALYSGVLRPHGNFS
ALSCELGGGNGSSSLVCDLGNPMKAGAQIRGGLRFTLPQLSDSSSSVRFELQIRSKNANN
SQSAVVPVALAVRAATRVSVLGVSRPDVVTIPEGGWGPDPPQRLQDLGPPVEHVYEVVNE
GPSAISQGTLELSCPLGHRGHPLLYVTGHSGLPNCSASHPLDPLRLAEQEQSPGPHVLQR
RDTGDTGDTLGCPETECFRLSCPSGGLERQQRVSLRLTFHLWTPPPAQDVGTPSLRCDAE
FRVLRLPYRLRPESYPRHRLQVVTALSWARPEAGGGVPVWVVVLAVLLGLLLLGLLCYGL
YKLGFFKRSGPYGTAMEKAQLKPQAASEA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggccccggccccggcccccccgcgccgcccccggccccggcgccgctgccggccccgg
atcccgctcccggtgccgctcccgctgctgctcccgctgctgctcccgccggtcgccgcc
ttcaacctggaggcgtcgcggcccgtggtcttccgcggggcccccgggtccctcttcggc
ttcgcgctggacttttacctgcccgagccccgcagtgtcagcatcctggtgggggccccc
aaggccaacacgagccagcccaatgtcacccaggggggggccgtgttccactgcccgtgg
ccccccggcggcgactgcacccccatcgacttcgaccacatcgggacccgcacccacgac
tttgggggcaacagcagcgacgcccccgagcccgtggagttcaagtccctgcagtggttc
ggggccaccgtgagggcccacaacggctccatcctggcctgcgcccccctgtacagctgg
agcccccccaaggaggaggggggggcacgggagccggtgggctcctgcttcctctccatc
ggcaacttctccaagtttgtggaatacgctccctgccgctcagacctgaactcggcggcg
gggcaggggtactgccaggggggcttcagcgccgagttcacccagaccgggcgggtgctc
ctgggggggcccggcagctacttctggcaagggcaggtgatgtcggcgacacaggagcag
atcgcggccgggaacttccccgagtacctgatccaggaggtgccggggcagctgcagacg
cggcaggcggcaccgagccacgacgacagctacatgggctactcggtggcagtcggggag
ttcagcggtgacacgacgcaagacttcgtggccggtgtccccaaaggcaacctcacctac
ggctacgtcaccatcctcaatggcaccaacatgaggtccctgtacaacttctcgggggag
cagatggcctcgtacttcggctacgccgtggctgccaccgatgtcaacaacgacgggctg
acggacctgctggtgggggccccgctgttcatggcgcgcagcggcgcggggggggcgcgg
gagctgggccgggtgtacctgtacctgcagcgggggggggccccgcccgcgccccccgcc
cccctcaccggcacccacgagttcgggaggttcggcagcgccatcgcccccctgggggac
ctggaccgggacggcttcaacgacgtggccgtgggggccccgctgggggccgagggtcgc
cgggggctcgtgttcatcttccggggggggggcgcggggctgcgcccccggcccgcgcag
gtgctgcggggtctgggggggccccgagcccagcccgacttcttcggggccgccctgcgc
ggggccaccgacctggacggcaacggctacccggacctcctggttggcgccttcggggcg
gacgcggccgtggtttacaggggccgccccatcgtccacgccagcgccaccctggccatt
gtccccaccatgttcaaccccgaggagcgcggctgcgtcctggcggcgagtggccaccac
gtgccctgcatcaatgtcaccttctgcctcaacgcctcggggcgtcacctgcccggcccc
atcgggctggcgctggagctgagcgtggacggggccaaggcggggggggcgcggcgagcg
ctgttcctgggggggggcccggggggggctcccccctcccccacccggaacctgtccctg
gaggtccccaacggggggaccccacgctgccgcaccctgggcgtgttcctgaggaacgag
tcggagttccgggacaagctgtcgcccatcccggtgtcgctgagcctggccctggacccg
gccgtgtcccctcccccgccggggctggccccgctgctgtccccggccacgcgcacgcgc
ctggaggccaaggcccacatccagctggactgtggcgaggacaatgtctgcgtgcccgac
ctgcagctcgaggccagcgcggaccgccgggccgtgttcctgggggacaggaacagcctg
aacgtgacgttccacgcgcggaacgtgggcgaggggggggcgtacgaggccgagctgcac
gtgcggccccccccgggcgcgctctactcgggggtgctgcggccgcacgggaatttctcg
gccctgagctgtgagctgggggggggcaacggctcgagctccctcgtgtgcgacctgggc
aaccccatgaaggcgggggcgcagatccggggggggctgcgcttcaccctcccccagctg
agcgacagcagcagcagcgtccgcttcgagctgcagatccgcagcaagaacgcgaacaac
tcgcagagcgccgtggtgccggtggcgctggccgtgagggcggccaccagggtgtccgtg
ctcggggtgtcccggcccgacgttgtcaccatccccgagggggggtggggacccgacccc
ccccagcggctgcaggacctggggccacccgtggagcacgtgtacgaggtggtgaacgag
ggtcccagcgccatcagccagggcacgctggagctgagctgtcccctgggccaccgcggc
caccccctgctctacgtcactggccactcggggctgcccaactgctcggccagccacccc
ctggacccgctgcgcctggcggagcaggagcagagccccgggccccacgtcctgcagcgc
cgggacacgggggacacgggggacaccctgggctgtcccgagaccgagtgcttccgcctg
agctgcccctcgggggggctggagcggcagcagcgggtcagtctgcgcctgaccttccac
ctgtggacccccccccctgcgcaggacgtggggaccccgtccctgcgctgtgacgccgag
ttccgggtgctgcggctcccgtaccgcctgcggcccgagtcctacccgcgccaccggctg
caggtggtgacagcgctgtcgtgggcgcggcccgaggcgggcgggggggtcccggtgtgg
gtggtggtgctcgcggtgctgctggggctgctcctgctcggcctcctctgctacggcctc
tacaagctcgggttcttcaagcgctcggggccctacggcaccgccatggagaaggcgcag
ctcaaaccccaggcggcctccgaggcctga
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