Aphelocoma coerulescens (scrub jay): 138099932
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Entry
138099932 CDS
T10543
Symbol
RARG
Name
(RefSeq) retinoic acid receptor gamma isoform X2
KO
K08529
retinoic acid receptor gamma
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138099932 (RARG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
acoe03310
]
138099932 (RARG)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
138099932 (RARG)
Nuclear receptors [BR:
acoe03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
138099932 (RARG)
SSDB
Ortholog
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
SHPRH_helical-2nd
Motif
Other DBs
NCBI-GeneID:
138099932
NCBI-ProteinID:
XP_068853647
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Position
29:complement(910191..917776)
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AA seq
427 aa
AA seq
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MFGCVEAAAAAPRRLHDVTNRGGCALRRVPVPAGCGGPARRALEPSPGRVLGDTGPPSPP
PPPRVHKPCFVCSDRSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRERNCQINKVTRNR
CQFCRLQKCFQVGMSKEAVQNDRNKRKKEVKEDLGGDELSPELAELVRRVSRAHQETFPS
LGQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSMADQITLL
KAACLDILMLRICTRYTPEQDTMTFSDGLTLTRTQMHNAGFGPLTDLVFAFAGQLLPLQL
DDTETGLLSAICLICGDRMELEQPRRVERLQEPLLEALRVYARRRRPRQPQRFPRMLLKI
TDLRGISTKGAERAITLRTEIPGPMPPLIREMLENPEIFTEVGGDSHPPPPDPPAAQDSP
PGLPKSP
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctgcgtggaggcggcggcggcggctccgcggcggctgcacgacgtgacgaac
cgcgggggctgcgcgctgcgcagggtcccggtgcccgccggctgcgggggccccgcccgt
agagccctggagccctcccctgggcgggttttgggggacacgggccccccctcgccaccg
ccccccccccgtgtgcacaagccttgcttcgtgtgcagcgaccgcagctccgggtaccac
tatggagtgagctcctgcgagggctgcaaggggtttttccggcggagcatccagaagaac
atggtgtacacgtgtcaccgcgagcggaactgccagatcaacaaggtcacgcggaaccgg
tgccagttctgccgcctccagaagtgcttccaggtcggaatgtccaaggaagccgtgcag
aacgaccggaacaagaggaagaaggaggtgaaggaggatttggggggggatgagctgagc
cccgagctggccgagctggtgcggagggtcagcagagcccaccaggagaccttcccctca
ctgggccagctgggcaagtacaccacgaactcgagcgctgaccaccgggtgcagctggac
ctggggctgtgggacaagttcagcgaattggccaccaagtgcatcatcaagatcgtggag
tttgcgaagcggctgccggggttcacggggctcagcatggctgaccagatcactctgctc
aaggccgcctgcctcgatatcctgatgctgcggatctgcacccgctacacgccggagcag
gacacgatgacgttctcggacgggctgacgctgacccggacccagatgcacaacgcggga
tttgggcccctcaccgatctggtgttcgccttcgcggggcagctcctgccgctgcagctc
gatgacaccgagaccgggctgctcagtgccatctgcctcatctgtggggaccggatggag
ctggagcagccccggcgcgtggagcggctgcaggagccgctgctcgaggccctccgggtc
tacgcccggcgccggcgcccgcggcagccgcagcgtttcccccgcatgctgctcaaaatc
accgacctgcgcggcatcagcaccaagggggcagaacgagccatcaccctgcgcaccgag
atcccggggccgatgccccccctgatccgggagatgctggagaaccccgaaatcttcacc
gaggtggggggggacagccatcccccacccccagacccccctgctgcccaggacagcccc
cctggcctccccaaatccccatag
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