Aphelocoma coerulescens (scrub jay): 138100033
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Entry
138100033 CDS
T10543
Symbol
HOXC11
Name
(RefSeq) homeobox protein Hox-C11
KO
K09296
homeobox protein HoxC/D11
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138100033 (HOXC11)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
138100033 (HOXC11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3528
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
138100033
NCBI-ProteinID:
XP_068853809
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All DBs
Position
29:complement(3179966..3182135)
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AA seq
302 aa
AA seq
DB search
MFNSVNLGNFCSQSRKERSGDFGDRAGCASNLYLPSCTYYVPEFSTVSSFLPQAPSRQIS
YPYSANLAQVPAVPREVPYALEPSSKWHPRGNYASCYSAEELMHRECIPPAGMSEMLMKN
ESAYSHHHHHHHHHPPASSAPAPSGFYSGMSKNSVLPQGFDRFFENSSFCGAENAPESCA
QKGDEGKAAAETLENAEEEEENTNPGSSSASSSSGAKESSKSGAASAPRTRKKRCPYSKF
QIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRDRLQYFSGNP
LL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactcggtgaacctgggcaacttctgctcgcagtcgcgcaaggagcgcagcggc
gattttggggacagggcgggctgcgcgtccaacctgtacctgcccagctgcacctattac
gtgcccgagttctccaccgtgtcctccttcctgccgcaggccccttctcgccaaatctcc
tacccctactcggccaacctggcgcaagtgcccgccgtgcctcgggaggtgccctacgcg
ctggagccctcgagtaaatggcacccgcgcgggaattacgcgtcgtgttactccgccgag
gagctgatgcacagggagtgcatcccgcccgccggcatgagcgaaatgctaatgaaaaac
gagagcgcctacagccaccaccatcaccaccatcaccaccatcccccggcctccagcgcc
ccggcgccgtcgggtttttactccgggatgagcaaaaactccgtcctgccccaaggcttc
gaccgcttcttcgagaattcctccttctgcggcgcggaaaacgcgcccgagagctgcgcg
cagaaaggggacgaaggcaaagcggccgcggagacgctggagaacgcggaggaggaggag
gagaacacaaatcccggctcttcctcggcgtcgtcctcgtcgggagccaaggagagctcc
aaaagcggcgctgcgagtgctcccaggacgaggaagaagcgctgcccctactcgaaattc
cagatccgggagctggagcgggaattcttcttcaacgtctacatcaacaaagagaagcgg
ctgcagctgtccaggatgttgaacctcaccgaccgccaggttaaaatctggtttcagaac
aggaggatgaaagaaaaaaaactcagcagggaccgcctgcagtatttctctgggaatccc
ttgttgtga
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