KEGG   Aphelocoma coerulescens (scrub jay): 138100114
Entry
138100114         CDS       T10543                                 
Symbol
CALR
Name
(RefSeq) calreticulin
  KO
K08057  calreticulin
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe04141  Protein processing in endoplasmic reticulum
acoe04145  Phagosome
acoe04148  Efferocytosis
acoe05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    138100114 (CALR)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    138100114 (CALR)
   04148 Efferocytosis
    138100114 (CALR)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    138100114 (CALR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:acoe03110]
    138100114 (CALR)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:acoe04091]
    138100114 (CALR)
Chaperones and folding catalysts [BR:acoe03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   138100114 (CALR)
Lectins [BR:acoe04091]
 L-type lectins
  138100114 (CALR)
SSDB
Motif
Pfam: Calreticulin MDM10 Phage_tail_tube_init DDHD DUF5901
Other DBs
NCBI-GeneID: 138100114
NCBI-ProteinID: XP_068853926
LinkDB
Position
30:complement(356713..359978)
AA seq 414 aa
MSPLSVLAPVLFGALLAAAGPTQFFREEFGDGDAWTRRWVESKHKPDYGRFVLTAGKFYG
DAEKDKGIQTSQDARFYALSSRFEPFSNRDKTLVVQFTVKHEQNIDCGGGYVKLFPASLS
QEDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFSHLYTLVVRP
DNTYEVKIDNARVESGSLEEDWDFLPPKKIKDPEAKKPDDWDERAKIDDPEDTKPEDWDK
PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWRPQQIDNPDYKGKWVHPEIDNPE
YSPDPLLYSYDSFGVIGLDLWQVKSGTIFDNFLITDDEKLAEEIGNETWGATKDAERKMK
EQQDEEQRKKQEEEEKQQKEEEGDDEGDGDEEEEDEEEPEAEPEEAEAAPRDEL
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgagccctctcagcgtcctcgcccccgtcctgttcggagccctcctggcggcagccggc
cccacccagttcttccgcgaggagttcggggatggagacgcctggacccgccggtgggtg
gaatccaagcacaaacccgactacggccgcttcgtcctcactgccgggaagttctacggc
gacgccgagaaggacaaagggatccagacgagccaggacgcccggttctacgccctgtcc
tcccgcttcgagcccttcagcaaccgcgacaagacgctggtggtgcagttcacggtgaag
cacgagcagaacatcgactgcggcggcggctacgtgaagctcttcccggccagcctgagc
caggaggacatgcacggcgactccgagtacaacatcatgtttggccccgacatctgcggc
cccggcactaagaaggtccacgtgatctttaactacaaagggaagaacgtgttgatcaac
aaagacattcgctgcaaggatgacgagttcagccacctgtacacgctggtggtgcggccg
gacaacacgtacgaggtgaagatcgacaacgcccgcgtggagtcggggagcctggaggag
gattgggatttcctccccccaaaaaagatcaaagaccccgaggccaagaaacccgacgac
tgggacgagcgggccaagatcgatgaccctgaggacaccaagcctgaggactgggacaaa
cccgagcacatcccggaccccgacgccaagaaaccggaggattgggacgaggagatggac
ggggagtgggagccgcccgtgatccagaaccccgagtacaagggcgagtggaggccgcag
cagatcgacaaccccgactacaagggcaagtgggtgcaccccgagatcgacaaccccgag
tacagcccggaccccctgctctactcctacgacagcttcggggtcatcggcctcgacctc
tggcaggtgaagtcaggcaccatctttgacaatttcctgatcacggatgatgagaagctg
gcggaggagatcggcaacgagacctggggggccaccaaggacgcagagaggaagatgaag
gagcagcaggacgaggagcagcggaagaagcaggaggaggaggagaagcagcagaaagaa
gaggaaggggacgatgagggcgatggggacgaggaggaggaggatgaggaggagcccgag
gccgagcccgaggaggcggaggcggccccgcgggacgagctctga

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