Aphelocoma coerulescens (scrub jay): 138100293
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Entry
138100293 CDS
T10543
Symbol
RPAP3
Name
(RefSeq) RNA polymerase II-associated protein 3
KO
K23002
RNA polymerase II-associated protein 3
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoe03021
]
138100293 (RPAP3)
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
138100293 (RPAP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_8
TPR_11
TPR_9
TPR_19
TPR_14
TPR_16
TPR_12
TPR_7
TPR_17
ANAPC3
FAT
NOMO_8th
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
138100293
NCBI-ProteinID:
XP_068854210
LinkDB
All DBs
Position
1A:complement(32336201..32354872)
Genome browser
AA seq
668 aa
AA seq
DB search
MSSPSKAIELQLQVKQNAEELQDFMRELESWEKDIKEVDSELRKQSGVPEENLPPIRNKA
FKKKKKSKNKVPSKITSEENKKNKIKSYDYEAWGKLDVDKILEELDKEDSTHDSVSPESD
SEEDGIHIDAEKALAEKEKGNNYFKQGNFDEAIKCYTRGMHSDPYNPVLPTNRASAFYRM
KKFSVAESDCNLALALDKNYIKAYARRGAARFALKNLQGAKEDYEKVLELDANNFEAKNE
LKKINQALSSKESSEQKEFEDTIRTGLTDEEKQRIEEQQLKQKAIAEKDLGNGYFKEGKY
EAAIECYTRGIAADGTNALLPANRAMAYLKIEKYKEAEDDCTQALLLDASYSKAFARRGA
ARVALGKLKEAVQDFEAVLKLEPGNKQAINELTKIRNELSEKEQQTQQEYPAVLIKETEI
KNVVKLIDNPLQIKSTKPLRRIDIEEVDDDTSDDDLPSTTSLVSNWRNSVSIETTETLDQ
DDLLTTVDIPKAKHLKIEEISDTSPLQLPVNVKGVSSTLNPSFPASKQREKEIRMSFMSA
SPVPPIPANSFQLESDFRKLKDCPENMYLYLKQIEPSLYAKLFQKSLDPDLFNQILKILH
DFYIEKEEPSLILEILQRLSELKRFDMAVMFMSGSEKKITQVLFNHVTHMGLKDASVEEL
EKKYGIFS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaccaagtaaagcgatagaactgcagctgcaagtgaagcaaaatgctgaagag
ctgcaggattttatgagagaattggagagctgggaaaaagatattaaagaagtggattct
gaactcaggaaacagagtggggtcccagaagagaatttgccaccaattcgaaacaaagct
tttaagaaaaagaagaaaagcaaaaataaagtcccttcaaagataacctctgaggaaaac
aagaaaaataagatcaaatcttacgattacgaagcatggggaaaacttgatgtggataaa
atacttgaagaacttgataaagaagatagtactcatgattctgtatctccagaatcagac
tctgaagaagatggaattcatatagatgcagaaaaggctcttgcagagaaggaaaagggt
aataactactttaaacaaggaaattttgatgaagctataaaatgctatactagagggatg
cattctgatccatacaatccagtactgcccacaaacagagcatcagctttttatagaatg
aaaaagttttctgttgcggaatctgactgcaatttagcacttgctttagataaaaattac
ataaaggcttatgcgagaagaggggccgctcgctttgctttgaaaaatcttcaaggtgct
aaagaagactatgaaaaagttttggagcttgatgcaaacaactttgaagcaaaaaatgaa
ctgaagaaaattaatcaggctctgtcatcaaaagaaagttcagaacagaaagagtttgaa
gatacgatcagaacaggattaacagatgaagagaagcagcgcattgaagagcagcagctc
aagcagaaggcaattgcagaaaaagatctgggtaatggttatttcaaagaaggaaagtac
gaggctgcaatagaatgttacacccgtggtatcgcagcagatggcaccaatgcactactg
ccagctaacagagccatggcctacctaaagattgagaagtacaaagaggcagaagatgac
tgcacacaagctctgctcttagatgcttcctattctaaagcttttgctagaagaggagct
gccagagttgctcttggaaagctaaaggaagctgttcaagattttgaagctgttctgaag
ctggaacctggaaataaacaagcaataaacgaactcactaaaataaggaatgaattatct
gagaaagaacagcagactcaacaagaatatcctgcagtattgataaaagaaacggaaatt
aaaaatgtagtgaaactgattgataatccattacagattaaatcaacaaagccattgcga
agaatagatattgaagaagttgatgatgatacatcagatgatgacttgcccagcactact
tctttagtcagtaactggaggaattcagtgagtattgaaacaacagagactctagatcag
gatgatctcttgactacagttgatattccaaaagcaaagcacttgaaaatagaagaaatc
agtgatacgtcaccattacagctgcctgtaaatgtgaaaggagtttcatcaacattgaat
ccatcttttcctgcaagcaaacagagagaaaaagaaatcagaatgtcatttatgtctgct
tctccagttcctcccattcctgcaaattctttccagcttgaatctgacttcaggaagttg
aaagactgcccagaaaatatgtacttgtacctgaagcaaatagagccctcgctttatgca
aagctgtttcagaaatccttagatccagacttgtttaaccagatcctgaaaattctacat
gacttctacattgagaaagaggagccatcgctcatccttgaaatcctccagaggctctct
gaattaaaaagatttgatatggcagtaatgtttatgtcaggttcagaaaaaaaaattaca
caggtattattcaatcatgtgacccacatgggattaaaagatgcttctgttgaagaattg
gagaagaaatatggcattttctcttag
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